RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 OTUD7AQ8TE49 926 aaPredicted RBP14.64□□□□□ -0.07
CCDC90B-205ENST00000525916 SNX27Q96L92 541 aa14.64□□□□□ -0.07
CCDC90B-205ENST00000525916 SAMD11Q96NU1 681 aa14.64□□□□□ -0.07
CCDC90B-205ENST00000525916 CLDND1Q9NY35 253 aa14.64□□□□□ -0.07
CCDC90B-205ENST00000525916 PRKAG3Q9UGI9 489 aa14.64□□□□□ -0.07
CCDC90B-205ENST00000525916 PCDHB15Q9Y5E8 787 aa14.64□□□□□ -0.07
CCDC90B-205ENST00000525916 LOXHD1Q8IVV2 1947 aa14.64□□□□□ -0.07
CCDC90B-205ENST00000525916 C19orf67A6NJJ6 358 aa14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 H3BNC9 293 aa14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 GOLGA8HP0CJ92 632 aa14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 SNHG28P0DPA3 235 aa14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 IRS1P35568 1242 aa14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 STXBP2Q15833 593 aa14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 ADHFE1Q8IWW8 467 aa14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 DHX37Q8IY37 1157 aaKnown RBP14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 RGS22Q8NE09 1264 aa14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 SYTL5Q8TDW5 730 aaPredicted RBP14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 NSUN6Q8TEA1 469 aaKnown RBP14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 YME1L1Q96TA2 773 aa14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 PHOX2BQ99453 314 aa14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 NSUN3Q9H649 340 aaKnown RBP14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 TCP11L1Q9NUJ3 509 aa14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 DDX41Q9UJV9 622 aaKnown RBP14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 FAM50BQ9Y247 325 aa14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 EMSYQ7Z589 1322 aa14.63□□□□□ -0.07
CCDC90B-205ENST00000525916 SORBS3O60504 671 aa14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 UPP2O95045 317 aa14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 EIF2AK2P19525 551 aaKnown RBP14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 THPOP40225 353 aa14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 COL19A1Q14993 1142 aa14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 CDC37Q16543 378 aaPredicted RBP14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 PLEKHG4Q58EX7 1191 aa14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 RPAINQ86UA6 219 aa14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 FBXO11Q86XK2 927 aa14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 TMEM192Q8IY95 271 aa14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 PPTC7Q8NI37 304 aa14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 EMID1Q96A84 441 aaPredicted RBP14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 RMDN3Q96TC7 470 aa14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 UBA5Q9GZZ9 404 aa14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 MUTYHQ9UIF7 546 aa14.62□□□□□ -0.07
CCDC90B-205ENST00000525916 USP34Q70CQ2 3546 aa14.61□□□□□ -0.07
CCDC90B-205ENST00000525916 RSPH10B2B2RC85 870 aa14.61□□□□□ -0.07
CCDC90B-205ENST00000525916 RSPH10BP0C881 870 aa14.61□□□□□ -0.07
CCDC90B-205ENST00000525916 LTBRP36941 435 aa14.61□□□□□ -0.07
CCDC90B-205ENST00000525916 CLUL1Q15846 466 aa14.61□□□□□ -0.07
CCDC90B-205ENST00000525916 SERINC5Q86VE9 423 aa14.61□□□□□ -0.07
CCDC90B-205ENST00000525916 IWS1Q96ST2 819 aa14.61□□□□□ -0.07
CCDC90B-205ENST00000525916 OSBPL7Q9BZF2 842 aa14.61□□□□□ -0.07
CCDC90B-205ENST00000525916 MRVI1Q9Y6F6 885 aa14.61□□□□□ -0.07
CCDC90B-205ENST00000525916 ABCB11O95342 1321 aa14.61□□□□□ -0.07
CCDC90B-205ENST00000525916 FGAP02671 866 aa14.6□□□□□ -0.07
CCDC90B-205ENST00000525916 HAND2P61296 217 aa14.6□□□□□ -0.07
CCDC90B-205ENST00000525916 DLX2Q07687 328 aaPredicted RBP14.6□□□□□ -0.07
CCDC90B-205ENST00000525916 LAMC2Q13753 1193 aa14.6□□□□□ -0.07
CCDC90B-205ENST00000525916 ALX1Q15699 326 aa14.6□□□□□ -0.07
CCDC90B-205ENST00000525916 GPATCH4Q5T3I0 446 aaKnown RBP14.6□□□□□ -0.07
CCDC90B-205ENST00000525916 ARHGEF16Q5VV41 709 aa14.6□□□□□ -0.07
CCDC90B-205ENST00000525916 TOP1MTQ969P6 601 aa14.6□□□□□ -0.07
CCDC90B-205ENST00000525916 UPF3BQ9BZI7 483 aaKnown RBP14.6□□□□□ -0.07
CCDC90B-205ENST00000525916 TTC3P53804 2025 aa14.59□□□□□ -0.07
CCDC90B-205ENST00000525916 PLXNA4Q9HCM2 1894 aa14.59□□□□□ -0.07
CCDC90B-205ENST00000525916 BAZ2BQ9UIF8 2168 aaKnown RBP14.59□□□□□ -0.07
CCDC90B-205ENST00000525916 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.59□□□□□ -0.07
CCDC90B-205ENST00000525916 CTSHP09668 335 aa14.59□□□□□ -0.07
CCDC90B-205ENST00000525916 HOXD8P13378 290 aaPredicted RBP14.59□□□□□ -0.07
CCDC90B-205ENST00000525916 IRX6P78412 446 aaPredicted RBP14.59□□□□□ -0.07
CCDC90B-205ENST00000525916 HSDL1Q3SXM5 330 aa14.59□□□□□ -0.07
CCDC90B-205ENST00000525916 PRSS33Q8NF86 280 aa14.59□□□□□ -0.07
CCDC90B-205ENST00000525916 MFSD14AQ96MC6 490 aa14.59□□□□□ -0.07
CCDC90B-205ENST00000525916 TTC14Q96N46 770 aa14.59□□□□□ -0.07
CCDC90B-205ENST00000525916 ZKSCAN3Q9BRR0 538 aa14.59□□□□□ -0.07
CCDC90B-205ENST00000525916 PXMP2Q9NR77 195 aa14.59□□□□□ -0.07
CCDC90B-205ENST00000525916 CFAP54Q96N23 3096 aa14.58□□□□□ -0.07
CCDC90B-205ENST00000525916 MBTPS2O43462 519 aa14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 EIF3JO75822 258 aaKnown RBP14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 CSPG5O95196 566 aa14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 NR3C2P08235 984 aa14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 MX1P20591 662 aa14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 CTNNB1P35222 781 aa14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 HYAL1Q12794 435 aa14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 HDAC1Q13547 482 aaPredicted RBP14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 SMAD2Q15796 467 aaKnown RBP14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 QRICH1Q2TAL8 776 aa14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 HERC4Q5GLZ8 1057 aaPredicted RBP14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 MCF2L2Q86YR7 1114 aa14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 RNF135Q8IUD6 432 aa14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 ADGRF4Q8IZF3 695 aa14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 SEPT8Q92599 483 aa14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 ATP6V0A1Q93050 837 aa14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 SPATA33Q96N06 139 aa14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 IFIH1Q9BYX4 1025 aaKnown RBP14.58□□□□□ -0.08
CCDC90B-205ENST00000525916 A0A0D9SFI3 127 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 C17orf102A2RUQ5 167 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 TREHO43280 583 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 TBX10O75333 385 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 RGS20O76081 388 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 GGPS1O95749 300 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 CFBP00751 764 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 MYCLP12524 364 aaPredicted RBP14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 GTF2F1P35269 517 aaKnown RBP eCLIP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms