RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 SLC37A4O43826 429 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 TSPY3P0CV98 308 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 TSPY8P0CW00 308 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 GRB10Q13322 594 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 ECM1Q16610 540 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 PTGISQ16647 500 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 KIAA0753Q2KHM9 967 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 ALS2CLQ60I27 953 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 NLRP14Q86W24 1093 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 FAM114A1Q8IWE2 563 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 KIRREL3Q8IZU9 778 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 MYCBPAPQ8TBZ2 947 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 TRIM31Q9BZY9 425 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 ERVV-1B6SEH8 477 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 KLRF2D3W0D1 207 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 FGRP09769 529 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 SKOR1P84550 965 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 PDXDC1Q6P996 788 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 GBP6Q6ZN66 633 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 ADAT2Q7Z6V5 191 aaKnown RBP14.52□□□□□ -0.09
CAPN1-202ENST00000524773 SH3RF3Q8TEJ3 882 aaPredicted RBP14.52□□□□□ -0.09
CAPN1-202ENST00000524773 ZHX3Q9H4I2 956 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.52□□□□□ -0.09
CAPN1-202ENST00000524773 TRAF5O00463 557 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 PPP1R37O75864 691 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 CAMTA2O94983 1202 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 MAP2K2P36507 400 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 EIF6P56537 245 aaKnown RBP14.52□□□□□ -0.09
CAPN1-202ENST00000524773 ERVK-9P63128 1117 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 CLEC10AQ8IUN9 316 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 MAPKAPK5Q8IW41 473 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 NOC3LQ8WTT2 800 aaKnown RBP14.52□□□□□ -0.09
CAPN1-202ENST00000524773 CAVIN3Q969G5 261 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 CCDC47Q96A33 483 aaKnown RBP14.52□□□□□ -0.09
CAPN1-202ENST00000524773 COA7Q96BR5 231 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 TMEM47Q9BQJ4 181 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 EPN3Q9H201 632 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 GEMIN8Q9NWZ8 242 aaKnown RBP14.52□□□□□ -0.09
CAPN1-202ENST00000524773 BARHL2Q9NY43 387 aa14.52□□□□□ -0.09
CAPN1-202ENST00000524773 ZNF804BA4D1E1 1349 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 FRMPD2Q68DX3 1309 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-202ENST00000524773 A0A1W2PQJ5 194 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 ORC4O43929 436 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 NOL4O94818 638 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 PDHBP11177 359 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 MAN2A1Q16706 1144 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 ASTE1Q2TB18 679 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-202ENST00000524773 CCDC40Q4G0X9 1142 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 CENPPQ6IPU0 288 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 SV2BQ7L1I2 683 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 CNPY4Q8N129 248 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 PRPF38AQ8NAV1 312 aaKnown RBP14.51□□□□□ -0.09
CAPN1-202ENST00000524773 TGFBRAP1Q8WUH2 860 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 NGLY1Q96IV0 654 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 PNMA5Q96PV4 448 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 PIGSQ96S52 555 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 C7orf25Q9BPX7 421 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 DDX47Q9H0S4 455 aaKnown RBP14.51□□□□□ -0.09
CAPN1-202ENST00000524773 GDF3Q9NR23 364 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 NRAPQ86VF7 1730 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 COPB2P35606 906 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 ITPK1Q13572 414 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 ODF2Q5BJF6 829 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 FAM83BQ5T0W9 1011 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 CNNM4Q6P4Q7 775 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 DDX12PQ92771 950 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 FAM212AQ96EL1 285 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 CXorf56Q9H5V9 222 aa14.51□□□□□ -0.09
CAPN1-202ENST00000524773 WNK3Q9BYP7 1800 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 FRMD3A2A2Y4 597 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 OPLAHO14841 1288 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 EPB41P11171 864 aaKnown RBP14.5□□□□□ -0.09
CAPN1-202ENST00000524773 ITGA4P13612 1032 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 MDH1P40925 334 aaKnown RBP14.5□□□□□ -0.09
CAPN1-202ENST00000524773 CEP57Q86XR8 500 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 CCDC13Q8IYE1 715 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 MDM1Q8TC05 714 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 CDK5RAP3Q96JB5 506 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 C8orf37Q96NL8 207 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 YY1AP1Q9H869 796 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 CEP104O60308 925 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 PAK2Q13177 524 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 CACNA1SQ13698 1873 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 LRRC55Q6ZSA7 311 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 MARCH10Q8NA82 808 aaPredicted RBP14.5□□□□□ -0.09
CAPN1-202ENST00000524773 UBLCP1Q8WVY7 318 aaPredicted RBP14.5□□□□□ -0.09
CAPN1-202ENST00000524773 CABS1Q96KC9 395 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 ATP6V1G3Q96LB4 118 aa14.5□□□□□ -0.09
CAPN1-202ENST00000524773 CELF4Q9BZC1 486 aaKnown RBP14.5□□□□□ -0.09
CAPN1-202ENST00000524773 CNOT8Q9UFF9 292 aaKnown RBP14.5□□□□□ -0.09
CAPN1-202ENST00000524773 GRID2IPA4D2P6 1211 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 HSD17B3P37058 310 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 CDK17Q00537 523 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 NONOQ15233 471 aaKnown RBP eCLIP14.49□□□□□ -0.09
CAPN1-202ENST00000524773 E2F5Q15329 346 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 UAP1Q16222 522 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-202ENST00000524773 KDM7AQ6ZMT4 941 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 BARGINQ6ZT62 677 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 DZIP1Q86YF9 867 aaKnown RBP14.49□□□□□ -0.09
CAPN1-202ENST00000524773 CALML4Q96GE6 196 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms