RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 MYOCDQ8IZQ8 938 aa6.06□□□□□ -1.44
CLINT1-208ENST00000524306 MMGT1Q8N4V1 131 aa6.06□□□□□ -1.44
CLINT1-208ENST00000524306 CERS5Q8N5B7 392 aa6.06□□□□□ -1.44
CLINT1-208ENST00000524306 JAKMIP2Q96AA8 810 aa6.06□□□□□ -1.44
CLINT1-208ENST00000524306 CDK5RAP3Q96JB5 506 aa6.06□□□□□ -1.44
CLINT1-208ENST00000524306 CHP1Q99653 195 aa6.06□□□□□ -1.44
CLINT1-208ENST00000524306 ZC3H12CQ9C0D7 883 aaKnown RBP6.06□□□□□ -1.44
CLINT1-208ENST00000524306 DEFB129Q9H1M3 183 aa6.06□□□□□ -1.44
CLINT1-208ENST00000524306 ACBD3Q9H3P7 528 aa6.06□□□□□ -1.44
CLINT1-208ENST00000524306 DDX4Q9NQI0 724 aaKnown RBP6.06□□□□□ -1.44
CLINT1-208ENST00000524306 BMP2KQ9NSY1 1161 aaPredicted RBP6.06□□□□□ -1.44
CLINT1-208ENST00000524306 PI4KBQ9UBF8 816 aa6.06□□□□□ -1.44
CLINT1-208ENST00000524306 BIN2Q9UBW5 565 aaPredicted RBP6.06□□□□□ -1.44
CLINT1-208ENST00000524306 DDX25Q9UHL0 483 aaKnown RBP6.06□□□□□ -1.44
CLINT1-208ENST00000524306 SERPINA10Q9UK55 444 aa6.06□□□□□ -1.44
CLINT1-208ENST00000524306 JRKLQ9Y4A0 524 aa6.06□□□□□ -1.44
CLINT1-208ENST00000524306 SAR1BQ9Y6B6 198 aa6.06□□□□□ -1.44
CLINT1-208ENST00000524306 TRIM21P19474 475 aaKnown RBP6.05□□□□□ -1.44
CLINT1-208ENST00000524306 MTIF2P46199 727 aaKnown RBP6.05□□□□□ -1.44
CLINT1-208ENST00000524306 USP14P54578 494 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 GTF2IP78347 998 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 SLC15A2Q16348 729 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 PTPN21Q16825 1174 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 MAP9Q49MG5 647 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 HAUS3Q68CZ6 603 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 DPP8Q6V1X1 898 aaPredicted RBP6.05□□□□□ -1.44
CLINT1-208ENST00000524306 TMEM179Q6ZVK1 233 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 CCDC65Q8IXS2 484 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 C7orf43Q8WVR3 580 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 BAP1Q92560 729 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 EXOC4Q96A65 974 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 SLF1Q9BQI6 1058 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 PSTPIP2Q9H939 334 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 MED4Q9NPJ6 270 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 USP40Q9NVE5 1235 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 CEP72Q9P209 647 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 MYH4Q9Y623 1939 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 CCDC66A2RUB6 948 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 C6orf229H3BNL8 230 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 ABCB7O75027 752 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 RPS6KA5O75582 802 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 TXKP42681 527 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 MCCD1P59942 119 aaPredicted RBP6.05□□□□□ -1.44
CLINT1-208ENST00000524306 SMC1AQ14683 1233 aaKnown RBP6.05□□□□□ -1.44
CLINT1-208ENST00000524306 SPA17Q15506 151 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 PDXDC1Q6P996 788 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 CCDC24Q8N4L8 307 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 EIF1ADQ8N9N8 165 aaKnown RBP6.05□□□□□ -1.44
CLINT1-208ENST00000524306 SNX29Q8TEQ0 813 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 DDX12PQ92771 950 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 CNKSR1Q969H4 720 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 PSMD1Q99460 953 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 IRX2Q9BZI1 471 aaPredicted RBP6.05□□□□□ -1.44
CLINT1-208ENST00000524306 SH2D4AQ9H788 454 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 TMEM260Q9NX78 707 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 JAG2Q9Y219 1238 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 TRAF3IP3Q9Y228 551 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 COL4A3BPQ9Y5P4 624 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 UBE4BO95155 1302 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 LTBP3Q9NS15 1303 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 SASH3O75995 380 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 TDP2O95551 362 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 FCER1AP12319 257 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 TCP1P17987 556 aaKnown RBP6.05□□□□□ -1.44
CLINT1-208ENST00000524306 SREBF1P36956 1147 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 CRKP46108 304 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 KIF5AQ12840 1032 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 COASYQ13057 564 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 MCM6Q14566 821 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 GLE1Q53GS7 698 aaKnown RBP6.05□□□□□ -1.44
CLINT1-208ENST00000524306 CCDC122Q5T0U0 273 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 EPM2AIP1Q7L775 607 aaPredicted RBP6.05□□□□□ -1.44
CLINT1-208ENST00000524306 FRMD5Q7Z6J6 570 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 TRIM59Q8IWR1 403 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 ETNPPLQ8TBG4 499 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 POLR3CQ9BUI4 534 aaPredicted RBP6.05□□□□□ -1.44
CLINT1-208ENST00000524306 KCTD10Q9H3F6 313 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 LUC7LQ9NQ29 371 aaKnown RBP6.05□□□□□ -1.44
CLINT1-208ENST00000524306 PLCB1Q9NQ66 1216 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 AGPAT5Q9NUQ2 364 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 AIPL1Q9NZN9 384 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.05□□□□□ -1.44
CLINT1-208ENST00000524306 PCDHA12Q9UN75 941 aa6.05□□□□□ -1.44
CLINT1-208ENST00000524306 A0A0U1RQG5 324 aaPredicted RBP6.04□□□□□ -1.44
CLINT1-208ENST00000524306 GTPBP10A4D1E9 387 aaKnown RBP6.04□□□□□ -1.44
CLINT1-208ENST00000524306 SLC16A3O15427 465 aaKnown RBP6.04□□□□□ -1.44
CLINT1-208ENST00000524306 TACC1O75410 805 aa6.04□□□□□ -1.44
CLINT1-208ENST00000524306 GFPT2O94808 682 aa6.04□□□□□ -1.44
CLINT1-208ENST00000524306 APBA3O96018 575 aa6.04□□□□□ -1.44
CLINT1-208ENST00000524306 RPA1P27694 616 aa6.04□□□□□ -1.44
CLINT1-208ENST00000524306 SPIRE1Q08AE8 756 aa6.04□□□□□ -1.44
CLINT1-208ENST00000524306 MUM1L1Q5H9M0 696 aa6.04□□□□□ -1.44
CLINT1-208ENST00000524306 FAM26FQ5R3K3 315 aa6.04□□□□□ -1.44
CLINT1-208ENST00000524306 KIAA1328Q86T90 577 aa6.04□□□□□ -1.44
CLINT1-208ENST00000524306 FMNL3Q8IVF7 1028 aa6.04□□□□□ -1.44
CLINT1-208ENST00000524306 ERMNQ8TAM6 284 aa6.04□□□□□ -1.44
CLINT1-208ENST00000524306 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.04□□□□□ -1.44
CLINT1-208ENST00000524306 SECISBP2LQ93073 1101 aaKnown RBP6.04□□□□□ -1.44
CLINT1-208ENST00000524306 CCDC42Q96M95 316 aa6.04□□□□□ -1.44
CLINT1-208ENST00000524306 UBA5Q9GZZ9 404 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms