RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 AKAP17AQ02040 695 aaKnown RBP23.96■■□□□ 1.43
TRAPPC9-215ENST00000524162 PKN1Q16512 942 aa23.96■■□□□ 1.43
TRAPPC9-215ENST00000524162 DGKDQ16760 1214 aa23.96■■□□□ 1.43
TRAPPC9-215ENST00000524162 CELF3Q5SZQ8 465 aaKnown RBP23.96■■□□□ 1.43
TRAPPC9-215ENST00000524162 DHX37Q8IY37 1157 aaKnown RBP23.96■■□□□ 1.43
TRAPPC9-215ENST00000524162 AFG1LQ8WV93 481 aa23.96■■□□□ 1.43
TRAPPC9-215ENST00000524162 TRIM43Q96BQ3 446 aaPredicted RBP23.96■■□□□ 1.43
TRAPPC9-215ENST00000524162 GPRASP2Q96D09 838 aa23.96■■□□□ 1.43
TRAPPC9-215ENST00000524162 TMEM39AQ9NV64 488 aa23.96■■□□□ 1.43
TRAPPC9-215ENST00000524162 SMCO2A6NFE2 343 aa23.95■■□□□ 1.42
TRAPPC9-215ENST00000524162 NEDD9Q14511 834 aa23.95■■□□□ 1.42
TRAPPC9-215ENST00000524162 CPLX2Q6PUV4 134 aaKnown RBP23.95■■□□□ 1.42
TRAPPC9-215ENST00000524162 NLRX1Q86UT6 975 aa23.95■■□□□ 1.42
TRAPPC9-215ENST00000524162 GIMAP8Q8ND71 665 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC9-215ENST00000524162 SH3GLB2Q9NR46 395 aa23.95■■□□□ 1.42
TRAPPC9-215ENST00000524162 PCDHA6Q9UN73 950 aa23.95■■□□□ 1.42
TRAPPC9-215ENST00000524162 PCDHA8Q9Y5H6 950 aa23.95■■□□□ 1.42
TRAPPC9-215ENST00000524162 MYL3P08590 195 aa23.94■■□□□ 1.42
TRAPPC9-215ENST00000524162 UBA1P22314 1058 aaKnown RBP23.94■■□□□ 1.42
TRAPPC9-215ENST00000524162 SH3RF1Q7Z6J0 888 aa23.94■■□□□ 1.42
TRAPPC9-215ENST00000524162 SESTD1Q86VW0 696 aa23.94■■□□□ 1.42
TRAPPC9-215ENST00000524162 TRIM22Q8IYM9 498 aa23.94■■□□□ 1.42
TRAPPC9-215ENST00000524162 PRDM5Q9NQX1 630 aaPredicted RBP23.94■■□□□ 1.42
TRAPPC9-215ENST00000524162 LAMA2P24043 3122 aaKnown RBP23.94■■□□□ 1.42
TRAPPC9-215ENST00000524162 TIMP1P01033 207 aa23.93■■□□□ 1.42
TRAPPC9-215ENST00000524162 SUPT20HL2P0C7V6 817 aa23.93■■□□□ 1.42
TRAPPC9-215ENST00000524162 GNA11P29992 359 aa23.93■■□□□ 1.42
TRAPPC9-215ENST00000524162 SP2Q02086 613 aa23.93■■□□□ 1.42
TRAPPC9-215ENST00000524162 UBE2SQ16763 222 aa23.93■■□□□ 1.42
TRAPPC9-215ENST00000524162 CCDC148Q8NFR7 591 aa23.93■■□□□ 1.42
TRAPPC9-215ENST00000524162 UBE2OQ9C0C9 1292 aaKnown RBP23.93■■□□□ 1.42
TRAPPC9-215ENST00000524162 UBIAD1Q9Y5Z9 338 aa23.93■■□□□ 1.42
TRAPPC9-215ENST00000524162 DOCK5Q9H7D0 1870 aa23.92■■□□□ 1.42
TRAPPC9-215ENST00000524162 GGPS1O95749 300 aa23.92■■□□□ 1.42
TRAPPC9-215ENST00000524162 RAG1P15918 1043 aa23.92■■□□□ 1.42
TRAPPC9-215ENST00000524162 CCT2P78371 535 aaKnown RBP23.92■■□□□ 1.42
TRAPPC9-215ENST00000524162 SEMA3FQ13275 785 aa23.92■■□□□ 1.42
TRAPPC9-215ENST00000524162 C8orf34Q49A92 452 aa23.92■■□□□ 1.42
TRAPPC9-215ENST00000524162 METTL7BQ6UX53 244 aa23.92■■□□□ 1.42
TRAPPC9-215ENST00000524162 TDHQ8IZJ6 230 aa23.92■■□□□ 1.42
TRAPPC9-215ENST00000524162 BICD2Q8TD16 824 aa23.92■■□□□ 1.42
TRAPPC9-215ENST00000524162 KATNAL1Q9BW62 490 aa23.92■■□□□ 1.42
TRAPPC9-215ENST00000524162 C6orf50Q9HD87 102 aa23.92■■□□□ 1.42
TRAPPC9-215ENST00000524162 CPLX1O14810 134 aa23.91■■□□□ 1.42
TRAPPC9-215ENST00000524162 SEC24BO95487 1268 aa23.91■■□□□ 1.42
TRAPPC9-215ENST00000524162 F2P00734 622 aa23.91■■□□□ 1.42
TRAPPC9-215ENST00000524162 SREBF1P36956 1147 aa23.91■■□□□ 1.42
TRAPPC9-215ENST00000524162 MDM2Q00987 491 aaPredicted RBP23.91■■□□□ 1.42
TRAPPC9-215ENST00000524162 PHKBQ93100 1093 aa23.91■■□□□ 1.42
TRAPPC9-215ENST00000524162 NCOA5Q9HCD5 579 aaKnown RBP23.91■■□□□ 1.42
TRAPPC9-215ENST00000524162 PFKFB2O60825 505 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 CDKL5O76039 1030 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 PSMC6P62333 389 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 SSRP1Q08945 709 aaKnown RBP23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 NBPF20Q3BBV1 942 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 HSDL1Q3SXM5 330 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 LRIT3Q3SXY7 679 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 MFSD5Q6N075 450 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 IL27Q8NEV9 243 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 KAT2BQ92831 832 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 BADQ92934 168 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 SPATA33Q96N06 139 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 SLC26A6Q9BXS9 759 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 ANO3Q9BYT9 981 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 MLXIPQ9HAP2 919 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 JADE2Q9NQC1 790 aa23.9■■□□□ 1.42
TRAPPC9-215ENST00000524162 HAS3O00219 553 aa23.89■■□□□ 1.41
TRAPPC9-215ENST00000524162 B4GALT4O60513 344 aa23.89■■□□□ 1.41
TRAPPC9-215ENST00000524162 DEXIO95424 95 aa23.89■■□□□ 1.41
TRAPPC9-215ENST00000524162 ITGB5P18084 799 aa23.89■■□□□ 1.41
TRAPPC9-215ENST00000524162 ITGB8P26012 769 aa23.89■■□□□ 1.41
TRAPPC9-215ENST00000524162 FXR1P51114 621 aaKnown RBP eCLIP23.89■■□□□ 1.41
TRAPPC9-215ENST00000524162 NIPA1Q7RTP0 329 aa23.89■■□□□ 1.41
TRAPPC9-215ENST00000524162 CRYGNQ8WXF5 182 aa23.89■■□□□ 1.41
TRAPPC9-215ENST00000524162 RTEL1Q9NZ71 1219 aa23.89■■□□□ 1.41
TRAPPC9-215ENST00000524162 KAT6AQ92794 2004 aa23.88■■□□□ 1.41
TRAPPC9-215ENST00000524162 CYP3A4P08684 503 aa23.88■■□□□ 1.41
TRAPPC9-215ENST00000524162 MTMR1Q13613 665 aa23.88■■□□□ 1.41
TRAPPC9-215ENST00000524162 GALNT17Q6IS24 598 aa23.88■■□□□ 1.41
TRAPPC9-215ENST00000524162 REXO1Q8N1G1 1221 aaKnown RBP23.88■■□□□ 1.41
TRAPPC9-215ENST00000524162 SLKQ9H2G2 1235 aaPredicted RBP23.88■■□□□ 1.41
TRAPPC9-215ENST00000524162 TPCN1Q9ULQ1 816 aa23.88■■□□□ 1.41
TRAPPC9-215ENST00000524162 STK36Q9NRP7 1315 aa23.87■■□□□ 1.41
TRAPPC9-215ENST00000524162 KCNA2P16389 499 aa23.87■■□□□ 1.41
TRAPPC9-215ENST00000524162 AK2P54819 239 aa23.87■■□□□ 1.41
TRAPPC9-215ENST00000524162 FPGSQ05932 587 aa23.87■■□□□ 1.41
TRAPPC9-215ENST00000524162 CEP55Q53EZ4 464 aa23.87■■□□□ 1.41
TRAPPC9-215ENST00000524162 MXRA8Q9BRK3 442 aa23.87■■□□□ 1.41
TRAPPC9-215ENST00000524162 SZT2Q5T011 3432 aa23.87■■□□□ 1.41
TRAPPC9-215ENST00000524162 TRIP12Q14669 1992 aaPredicted RBP23.86■■□□□ 1.41
TRAPPC9-215ENST00000524162 SCRN1Q12765 414 aa23.86■■□□□ 1.41
TRAPPC9-215ENST00000524162 GPR153Q6NV75 609 aa23.86■■□□□ 1.41
TRAPPC9-215ENST00000524162 TMEM199Q8N511 208 aa23.86■■□□□ 1.41
TRAPPC9-215ENST00000524162 ZFP91Q96JP5 570 aaPredicted RBP23.86■■□□□ 1.41
TRAPPC9-215ENST00000524162 C16orf70Q9BSU1 422 aa23.86■■□□□ 1.41
TRAPPC9-215ENST00000524162 TRPV6Q9H1D0 765 aa23.86■■□□□ 1.41
TRAPPC9-215ENST00000524162 MEIS1O00470 390 aa23.85■■□□□ 1.41
TRAPPC9-215ENST00000524162 NOP56O00567 594 aaKnown RBP23.85■■□□□ 1.41
TRAPPC9-215ENST00000524162 NEK4P51957 841 aa23.85■■□□□ 1.41
TRAPPC9-215ENST00000524162 ARHGAP4P98171 946 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms