RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 LAMC2Q13753 1193 aa14.32□□□□□ -0.12
CCNC-216ENST00000523961 SNX17Q15036 470 aa14.32□□□□□ -0.12
CCNC-216ENST00000523961 C1orf53Q5VUE5 145 aa14.32□□□□□ -0.12
CCNC-216ENST00000523961 JAKMIP3Q5VZ66 844 aa14.32□□□□□ -0.12
CCNC-216ENST00000523961 GALNT17Q6IS24 598 aa14.32□□□□□ -0.12
CCNC-216ENST00000523961 DHX37Q8IY37 1157 aaKnown RBP14.32□□□□□ -0.12
CCNC-216ENST00000523961 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
CCNC-216ENST00000523961 VTI1AQ96AJ9 217 aa14.32□□□□□ -0.12
CCNC-216ENST00000523961 CDHR1Q96JP9 859 aa14.32□□□□□ -0.12
CCNC-216ENST00000523961 PGBD1Q96JS3 809 aa14.32□□□□□ -0.12
CCNC-216ENST00000523961 POLR3EQ9NVU0 708 aa14.32□□□□□ -0.12
CCNC-216ENST00000523961 TMEM260Q9NX78 707 aa14.32□□□□□ -0.12
CCNC-216ENST00000523961 KIAA1217Q5T5P2 1943 aa14.32□□□□□ -0.12
CCNC-216ENST00000523961 MKI67P46013 3256 aaKnown RBP14.32□□□□□ -0.12
CCNC-216ENST00000523961 A6NJR5 290 aa14.31□□□□□ -0.12
CCNC-216ENST00000523961 SPATA31C2B4DYI2 1134 aa14.31□□□□□ -0.12
CCNC-216ENST00000523961 SREBF1P36956 1147 aa14.31□□□□□ -0.12
CCNC-216ENST00000523961 RTP1P59025 263 aa14.31□□□□□ -0.12
CCNC-216ENST00000523961 CXCL17Q6UXB2 119 aa14.31□□□□□ -0.12
CCNC-216ENST00000523961 C7orf61Q8IZ16 206 aa14.31□□□□□ -0.12
CCNC-216ENST00000523961 NSUN7Q8NE18 718 aaKnown RBP14.31□□□□□ -0.12
CCNC-216ENST00000523961 GPRASP2Q96D09 838 aa14.31□□□□□ -0.12
CCNC-216ENST00000523961 AIFM3Q96NN9 605 aa14.31□□□□□ -0.12
CCNC-216ENST00000523961 UBIAD1Q9Y5Z9 338 aa14.31□□□□□ -0.12
CCNC-216ENST00000523961 A0A0U1RQG5 324 aaPredicted RBP14.3□□□□□ -0.12
CCNC-216ENST00000523961 MAFGO15525 162 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 GGPS1O95749 300 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 MYL3P08590 195 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 ITGB5P18084 799 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 UBA1P22314 1058 aaKnown RBP14.3□□□□□ -0.12
CCNC-216ENST00000523961 ARHGAP4P98171 946 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 NEDD9Q14511 834 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 CELF3Q5SZQ8 465 aaKnown RBP14.3□□□□□ -0.12
CCNC-216ENST00000523961 PRPF38BQ5VTL8 546 aaKnown RBP14.3□□□□□ -0.12
CCNC-216ENST00000523961 MYSM1Q5VVJ2 828 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 DAGLBQ8NCG7 672 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 AFG1LQ8WV93 481 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 SENP7Q9BQF6 1050 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 SEZ6LQ9BYH1 1024 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 MLXIPQ9HAP2 919 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 JADE2Q9NQC1 790 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 PCDHA4Q9UN74 947 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 ATP11BQ9Y2G3 1177 aa14.3□□□□□ -0.12
CCNC-216ENST00000523961 TNRC18O15417 2968 aaPredicted RBP14.29□□□□□ -0.12
CCNC-216ENST00000523961 ADAMTS3O15072 1205 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 CYP3A4P08684 503 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 FDPSP14324 419 aaKnown RBP14.29□□□□□ -0.12
CCNC-216ENST00000523961 ZNF76P36508 570 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 PURAQ00577 322 aaKnown RBP14.29□□□□□ -0.12
CCNC-216ENST00000523961 SP2Q02086 613 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 ST3GAL1Q11201 340 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 SEMA3FQ13275 785 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 MTMR1Q13613 665 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 TRIM60Q495X7 471 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 CCDC83Q8IWF9 413 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 BLIDQ8IZY5 108 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 GIMAP8Q8ND71 665 aaPredicted RBP14.29□□□□□ -0.12
CCNC-216ENST00000523961 PPTC7Q8NI37 304 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 RASGRP4Q8TDF6 673 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 SPATA33Q96N06 139 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 MXRA8Q9BRK3 442 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 LLPHQ9BRT6 129 aaKnown RBP14.29□□□□□ -0.12
CCNC-216ENST00000523961 MTG1Q9BT17 334 aaPredicted RBP14.29□□□□□ -0.12
CCNC-216ENST00000523961 ALG1Q9BT22 464 aa14.29□□□□□ -0.12
CCNC-216ENST00000523961 H0YGN5 161 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 ARVCFO00192 962 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 JAK2O60674 1132 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 DTNBO60941 627 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 MMP3P08254 477 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 MCM2P49736 904 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 ITGA7Q13683 1181 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 DGKDQ16760 1214 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 CEP55Q53EZ4 464 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 MROH7Q68CQ1 1323 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 METTL7BQ6UX53 244 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 NIPA1Q7RTP0 329 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 CRYGNQ8WXF5 182 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 ALPK3Q96L96 1907 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 TOX2Q96NM4 488 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 PHF20Q9BVI0 1012 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 KCNJ14Q9UNX9 436 aa14.28□□□□□ -0.12
CCNC-216ENST00000523961 DCDC2CA8MYV0 355 aa14.27□□□□□ -0.13
CCNC-216ENST00000523961 MEIS1O00470 390 aa14.27□□□□□ -0.13
CCNC-216ENST00000523961 SORBS3O60504 671 aa14.27□□□□□ -0.13
CCNC-216ENST00000523961 PPFIA4O75335 1185 aa14.27□□□□□ -0.13
CCNC-216ENST00000523961 CDK7P50613 346 aa14.27□□□□□ -0.13
CCNC-216ENST00000523961 HMGN5P82970 282 aaKnown RBP14.27□□□□□ -0.13
CCNC-216ENST00000523961 TLE2Q04725 743 aa14.27□□□□□ -0.13
CCNC-216ENST00000523961 NPY5RQ15761 445 aa14.27□□□□□ -0.13
CCNC-216ENST00000523961 HSDL1Q3SXM5 330 aa14.27□□□□□ -0.13
CCNC-216ENST00000523961 CYFIP1Q7L576 1253 aa14.27□□□□□ -0.13
CCNC-216ENST00000523961 ANKRD33Q7Z3H0 272 aa14.27□□□□□ -0.13
CCNC-216ENST00000523961 SLC43A3Q8NBI5 491 aa14.27□□□□□ -0.13
CCNC-216ENST00000523961 KCNH7Q9NS40 1196 aa14.27□□□□□ -0.13
CCNC-216ENST00000523961 M0R2N6 131 aa14.26□□□□□ -0.13
CCNC-216ENST00000523961 NOP56O00567 594 aaKnown RBP14.26□□□□□ -0.13
CCNC-216ENST00000523961 PQBP1O60828 265 aaKnown RBP14.26□□□□□ -0.13
CCNC-216ENST00000523961 HOXD8P13378 290 aaPredicted RBP14.26□□□□□ -0.13
CCNC-216ENST00000523961 KCNA2P16389 499 aa14.26□□□□□ -0.13
CCNC-216ENST00000523961 CIITAP33076 1130 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms