RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 WDR89Q96FK6 387 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-239ENST00000523685 ERO1AQ96HE7 468 aa6.61□□□□□ -1.35
CTNNA1-239ENST00000523685 EAF1Q96JC9 268 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-239ENST00000523685 NT5C1AQ9BXI3 368 aa6.61□□□□□ -1.35
CTNNA1-239ENST00000523685 RNF208Q9H0X6 261 aa6.61□□□□□ -1.35
CTNNA1-239ENST00000523685 CNNM1Q9NRU3 951 aa6.61□□□□□ -1.35
CTNNA1-239ENST00000523685 PCDHA4Q9UN74 947 aa6.61□□□□□ -1.35
CTNNA1-239ENST00000523685 PPP2R3BQ9Y5P8 575 aa6.61□□□□□ -1.35
CTNNA1-239ENST00000523685 SSC5DA1L4H1 1573 aa6.61□□□□□ -1.35
CTNNA1-239ENST00000523685 PSME4Q14997 1843 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 SYNGAP1Q96PV0 1343 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 FANCIQ9NVI1 1328 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 FAM221AA4D161 298 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 TCP10L2B9ZVM9 353 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 F8W735 103 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 RNF225M0QZC1 329 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 CILPO75339 1184 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 USP2O75604 605 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 IL1R1P14778 569 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 EN2P19622 333 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 GYG1P46976 350 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 FOXO4P98177 505 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 NRG1Q02297 640 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 SP3Q02447 781 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 EPHA10Q5JZY3 1008 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 MFSD14BQ5SR56 506 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 INTS3Q68E01 1043 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 SLC4A10Q6U841 1118 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 LDHAL6AQ6ZMR3 332 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 ANKRD13AQ8IZ07 590 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 GCC1Q96CN9 775 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 OPTNQ96CV9 577 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 WDR18Q9BV38 432 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 TDRD3Q9H7E2 651 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 AKTIPQ9H8T0 292 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 SUGCTQ9HAC7 445 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 CYP4F12Q9HCS2 524 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 ZNF70Q9UC06 446 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 PTPN22Q9Y2R2 807 aa6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 COL1A1P02452 1464 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-239ENST00000523685 IRS2Q9Y4H2 1338 aa6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 CCL15-CCL14A0A0B4J2E2 113 aa6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 FRAT2O75474 233 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 BPNT1O95861 308 aa6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 GJA8P48165 433 aa6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 EXOSC9Q06265 439 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 CHAF1AQ13111 956 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 TNFAIP1Q13829 316 aa6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 CCL15Q16663 113 aa6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 HABP4Q5JVS0 413 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 BEND3Q5T5X7 828 aa6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 C15orf52Q6ZUT6 534 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 VPS37DQ86XT2 251 aa6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 AGGF1Q8N302 714 aaeCLIP6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 C12orf50Q8NA57 414 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 SLC43A3Q8NBI5 491 aa6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 SMG8Q8ND04 991 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 GPRASP2Q96D09 838 aa6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 PTPN18Q99952 460 aa6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 TMEM39BQ9GZU3 492 aa6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 C9orf78Q9NZ63 289 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 UBP1Q9NZI7 540 aa6.59□□□□□ -1.35
CTNNA1-239ENST00000523685 IL16Q14005 1332 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 GRM8O00222 908 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 TLR3O15455 904 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 VAMP4O75379 141 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 ALX3O95076 343 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 HIBADHP31937 336 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 CRKP46108 304 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 CACNB3P54284 484 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 FKBP1AP62942 108 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 CAP1Q01518 475 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 RPL6Q02878 288 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 APOBRQ0VD83 1088 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 VGLL4Q14135 290 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 MPP2Q14168 576 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 SLC4A8Q2Y0W8 1093 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 SLC9C1Q4G0N8 1177 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 ZC3H12AQ5D1E8 599 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 ANKRD34AQ69YU3 496 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 FDX2Q6P4F2 183 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 HDXQ7Z353 690 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 DZIP1LQ8IYY4 767 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 FBXO27Q8NI29 283 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 WFDC12Q8WWY7 111 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 BRI3BPQ8WY22 251 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 NKD1Q969G9 470 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 SPATA32Q96LK8 384 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 TINF2Q9BSI4 451 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 LRRC3Q9BY71 257 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 PUS3Q9BZE2 481 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 CSADQ9Y600 493 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 PTCH2Q9Y6C5 1203 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 SNCAIPQ9Y6H5 919 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 MYH3P11055 1940 aa6.58□□□□□ -1.36
CTNNA1-239ENST00000523685 ZNF646O15015 1829 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-239ENST00000523685 GTF2A2P52657 109 aa6.57□□□□□ -1.36
CTNNA1-239ENST00000523685 ID3Q02535 119 aa6.57□□□□□ -1.36
CTNNA1-239ENST00000523685 SOX4Q06945 474 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms