RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 KIAA1024Q9UPX6 916 aa23.29■■□□□ 1.32
SQLE-206ENST00000523430 LOC285556D6RIA3 1793 aa23.29■■□□□ 1.32
SQLE-206ENST00000523430 POTEFA5A3E0 1075 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 SERPINC1P01008 464 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 POTEIP0CG38 1075 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 RPS6P62753 249 aaKnown RBP23.28■■□□□ 1.32
SQLE-206ENST00000523430 TMEM132BQ14DG7 1078 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 TREML2Q5T2D2 321 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 SPATA1Q5VX52 437 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 HAUS3Q68CZ6 603 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 SNRNP48Q6IEG0 339 aaKnown RBP23.28■■□□□ 1.32
SQLE-206ENST00000523430 POTEGQ6S5H5 508 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 POTEEQ6S8J3 1075 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 RBM46Q8TBY0 533 aaKnown RBP23.28■■□□□ 1.32
SQLE-206ENST00000523430 NT5C3AQ9H0P0 336 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 EXOC1Q9NV70 894 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 PNMA2Q9UL42 364 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 SPDYE16A6NNV3 312 aaPredicted RBP23.28■■□□□ 1.32
SQLE-206ENST00000523430 E9PMD0 336 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 PDE4DQ08499 809 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 PAK1Q13153 545 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 GIMAP8Q8ND71 665 aaPredicted RBP23.28■■□□□ 1.32
SQLE-206ENST00000523430 NELFBQ8WX92 580 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 SLC5A5Q92911 643 aa23.28■■□□□ 1.32
SQLE-206ENST00000523430 FRMPD4Q14CM0 1322 aa23.27■■□□□ 1.32
SQLE-206ENST00000523430 ARP10275 920 aa23.27■■□□□ 1.32
SQLE-206ENST00000523430 NSMFQ6X4W1 530 aa23.27■■□□□ 1.32
SQLE-206ENST00000523430 DYMQ7RTS9 669 aa23.27■■□□□ 1.32
SQLE-206ENST00000523430 CATSPER3Q86XQ3 398 aa23.27■■□□□ 1.32
SQLE-206ENST00000523430 ADSSL1Q8N142 457 aa23.27■■□□□ 1.32
SQLE-206ENST00000523430 OTUD5Q96G74 571 aa23.27■■□□□ 1.32
SQLE-206ENST00000523430 RWDD2AQ9UIY3 292 aa23.27■■□□□ 1.32
SQLE-206ENST00000523430 EML1O00423 815 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 MEIS1O00470 390 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 SLC26A4O43511 780 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 PSMD10O75832 226 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 ITGB5P18084 799 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 OAZ1P54368 228 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 SETQ01105 290 aaPredicted RBP23.26■■□□□ 1.31
SQLE-206ENST00000523430 LRCH2Q5VUJ6 765 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 RNF207Q6ZRF8 634 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 ERMNQ8TAM6 284 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 HPS3Q969F9 1004 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 PURBQ96QR8 312 aaKnown RBP23.26■■□□□ 1.31
SQLE-206ENST00000523430 TAAR1Q96RJ0 339 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 A0A0G2JMZ2 1700 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 SPATA31C1P0DKV0 1188 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 FCER1AP12319 257 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 NF2P35240 595 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 UBASH3AP57075 661 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 TTLL12Q14166 644 aaPredicted RBP23.26■■□□□ 1.31
SQLE-206ENST00000523430 NAP1L5Q96NT1 182 aaPredicted RBP23.26■■□□□ 1.31
SQLE-206ENST00000523430 MXRA8Q9BRK3 442 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 INTS13Q9NVM9 706 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 RABGAP1Q9Y3P9 1069 aa23.26■■□□□ 1.31
SQLE-206ENST00000523430 CHMP2AO43633 222 aa23.25■■□□□ 1.31
SQLE-206ENST00000523430 GRIN3BO60391 1043 aa23.25■■□□□ 1.31
SQLE-206ENST00000523430 EIF2AK2P19525 551 aaKnown RBP23.25■■□□□ 1.31
SQLE-206ENST00000523430 SEMA3FQ13275 785 aa23.25■■□□□ 1.31
SQLE-206ENST00000523430 CDKAL1Q5VV42 579 aa23.25■■□□□ 1.31
SQLE-206ENST00000523430 OTOP1Q7RTM1 612 aa23.25■■□□□ 1.31
SQLE-206ENST00000523430 FILIP1Q7Z7B0 1213 aa23.25■■□□□ 1.31
SQLE-206ENST00000523430 DDX12PQ92771 950 aa23.25■■□□□ 1.31
SQLE-206ENST00000523430 CCDC47Q96A33 483 aaKnown RBP23.25■■□□□ 1.31
SQLE-206ENST00000523430 ZNF577Q9BSK1 485 aa23.25■■□□□ 1.31
SQLE-206ENST00000523430 MAP3K20Q9NYL2 800 aaKnown RBP23.25■■□□□ 1.31
SQLE-206ENST00000523430 IQCA1LA6NCM1 817 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 TRIM49BA6NDI0 452 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 IRF6O14896 467 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 SSBP05455 408 aaKnown RBP eCLIP23.24■■□□□ 1.31
SQLE-206ENST00000523430 TPM3P06753 285 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 PLA2G4BP0C869 781 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 RPA1P27694 616 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 CYP4A11Q02928 519 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 STK4Q13043 487 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 PCNX4Q63HM2 1172 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 UNC13DQ70J99 1090 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 ANKRD13AQ8IZ07 590 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 KIAA0895Q8NCT3 520 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 MYPNQ86TC9 1320 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 CDK11BP21127 795 aaKnown RBP23.24■■□□□ 1.31
SQLE-206ENST00000523430 PMS1P54277 932 aaKnown RBP23.24■■□□□ 1.31
SQLE-206ENST00000523430 MRPS9P82933 396 aaKnown RBP23.24■■□□□ 1.31
SQLE-206ENST00000523430 PPP2R5CQ13362 524 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 PTPN21Q16825 1174 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 CNNM4Q6P4Q7 775 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 SAMD3Q8N6K7 520 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 EIF2AK1Q9BQI3 630 aaKnown RBP23.24■■□□□ 1.31
SQLE-206ENST00000523430 TEX13BQ9BXU2 312 aa23.24■■□□□ 1.31
SQLE-206ENST00000523430 ATP2A1O14983 1001 aa23.23■■□□□ 1.31
SQLE-206ENST00000523430 CBFA2T2O43439 604 aa23.23■■□□□ 1.31
SQLE-206ENST00000523430 GAS7O60861 476 aa23.23■■□□□ 1.31
SQLE-206ENST00000523430 PSMC6P62333 389 aa23.23■■□□□ 1.31
SQLE-206ENST00000523430 PPATQ06203 517 aa23.23■■□□□ 1.31
SQLE-206ENST00000523430 LRMPQ12912 555 aa23.23■■□□□ 1.31
SQLE-206ENST00000523430 BAATQ14032 418 aaPredicted RBP23.23■■□□□ 1.31
SQLE-206ENST00000523430 ARID5BQ14865 1188 aa23.23■■□□□ 1.31
SQLE-206ENST00000523430 PGM5Q15124 567 aa23.23■■□□□ 1.31
SQLE-206ENST00000523430 GADL1Q6ZQY3 521 aa23.23■■□□□ 1.31
SQLE-206ENST00000523430 TMC6Q7Z403 805 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms