RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 ZNF713Q8N859 430 aaPredicted RBP20.48■□□□□ 0.87
CLK4-211ENST00000522556 TRIOBPQ9H2D6 2365 aa20.48■□□□□ 0.87
CLK4-211ENST00000522556 RANBP2P49792 3224 aaKnown RBP20.48■□□□□ 0.87
CLK4-211ENST00000522556 SPATA31C2B4DYI2 1134 aa20.47■□□□□ 0.87
CLK4-211ENST00000522556 ZEB2O60315 1214 aa20.47■□□□□ 0.87
CLK4-211ENST00000522556 PFKFB2O60825 505 aa20.47■□□□□ 0.87
CLK4-211ENST00000522556 CTDNEP1O95476 244 aa20.47■□□□□ 0.87
CLK4-211ENST00000522556 ZNF286BP0CG31 522 aa20.47■□□□□ 0.87
CLK4-211ENST00000522556 ME3Q16798 604 aa20.47■□□□□ 0.87
CLK4-211ENST00000522556 HABP4Q5JVS0 413 aaKnown RBP20.47■□□□□ 0.87
CLK4-211ENST00000522556 CELF3Q5SZQ8 465 aaKnown RBP20.47■□□□□ 0.87
CLK4-211ENST00000522556 MYSM1Q5VVJ2 828 aa20.47■□□□□ 0.87
CLK4-211ENST00000522556 DHX37Q8IY37 1157 aaKnown RBP20.47■□□□□ 0.87
CLK4-211ENST00000522556 CYP2W1Q8TAV3 490 aa20.47■□□□□ 0.87
CLK4-211ENST00000522556 KAT2BQ92831 832 aa20.47■□□□□ 0.87
CLK4-211ENST00000522556 ZMYND12Q9H0C1 365 aa20.47■□□□□ 0.87
CLK4-211ENST00000522556 TRPV6Q9H1D0 765 aa20.47■□□□□ 0.87
CLK4-211ENST00000522556 POLR3EQ9NVU0 708 aa20.47■□□□□ 0.87
CLK4-211ENST00000522556 PKD2L1Q9P0L9 805 aa20.47■□□□□ 0.87
CLK4-211ENST00000522556 ESYT2A0FGR8 921 aa20.46■□□□□ 0.87
CLK4-211ENST00000522556 B4GALT4O60513 344 aa20.46■□□□□ 0.87
CLK4-211ENST00000522556 ICAM3P32942 547 aa20.46■□□□□ 0.87
CLK4-211ENST00000522556 CHMP4BP1P59074 171 aa20.46■□□□□ 0.87
CLK4-211ENST00000522556 BADQ92934 168 aa20.46■□□□□ 0.87
CLK4-211ENST00000522556 EMID1Q96A84 441 aaPredicted RBP20.46■□□□□ 0.87
CLK4-211ENST00000522556 MTG1Q9BT17 334 aaPredicted RBP20.46■□□□□ 0.87
CLK4-211ENST00000522556 SLKQ9H2G2 1235 aaPredicted RBP20.46■□□□□ 0.87
CLK4-211ENST00000522556 TBX21Q9UL17 535 aa20.46■□□□□ 0.87
CLK4-211ENST00000522556 UBIAD1Q9Y5Z9 338 aa20.46■□□□□ 0.87
CLK4-211ENST00000522556 CPLX1O14810 134 aa20.45■□□□□ 0.86
CLK4-211ENST00000522556 FIBPO43427 364 aa20.45■□□□□ 0.86
CLK4-211ENST00000522556 ATP9AO75110 1047 aa20.45■□□□□ 0.86
CLK4-211ENST00000522556 CABYRO75952 493 aa20.45■□□□□ 0.86
CLK4-211ENST00000522556 CD4P01730 458 aa20.45■□□□□ 0.86
CLK4-211ENST00000522556 AKAP17AQ02040 695 aaKnown RBP20.45■□□□□ 0.86
CLK4-211ENST00000522556 SSRP1Q08945 709 aaKnown RBP20.45■□□□□ 0.86
CLK4-211ENST00000522556 NBPF20Q3BBV1 942 aa20.45■□□□□ 0.86
CLK4-211ENST00000522556 SPATA33Q96N06 139 aa20.45■□□□□ 0.86
CLK4-211ENST00000522556 TOX2Q96NM4 488 aa20.45■□□□□ 0.86
CLK4-211ENST00000522556 GJB4Q9NTQ9 266 aa20.45■□□□□ 0.86
CLK4-211ENST00000522556 TRMT13Q9NUP7 481 aaKnown RBP20.45■□□□□ 0.86
CLK4-211ENST00000522556 UMODL1Q5DID0 1318 aa20.45■□□□□ 0.86
CLK4-211ENST00000522556 DCDC2CA8MYV0 355 aa20.44■□□□□ 0.86
CLK4-211ENST00000522556 KIAA0355O15063 1070 aa20.44■□□□□ 0.86
CLK4-211ENST00000522556 SP4Q02446 784 aa20.44■□□□□ 0.86
CLK4-211ENST00000522556 LAMC2Q13753 1193 aa20.44■□□□□ 0.86
CLK4-211ENST00000522556 NPY5RQ15761 445 aa20.44■□□□□ 0.86
CLK4-211ENST00000522556 GNPTABQ3T906 1256 aa20.44■□□□□ 0.86
CLK4-211ENST00000522556 CYFIP1Q7L576 1253 aa20.44■□□□□ 0.86
CLK4-211ENST00000522556 PPTC7Q8NI37 304 aa20.44■□□□□ 0.86
CLK4-211ENST00000522556 C22orf23Q9BZE7 217 aa20.44■□□□□ 0.86
CLK4-211ENST00000522556 TMEM39AQ9NV64 488 aa20.44■□□□□ 0.86
CLK4-211ENST00000522556 PRKAG2Q9UGJ0 569 aa20.44■□□□□ 0.86
CLK4-211ENST00000522556 GTF3C3Q9Y5Q9 886 aa20.44■□□□□ 0.86
CLK4-211ENST00000522556 STAM2O75886 525 aa20.43■□□□□ 0.86
CLK4-211ENST00000522556 HOXD8P13378 290 aaPredicted RBP20.43■□□□□ 0.86
CLK4-211ENST00000522556 KCNA2P16389 499 aa20.43■□□□□ 0.86
CLK4-211ENST00000522556 SREBF1P36956 1147 aa20.43■□□□□ 0.86
CLK4-211ENST00000522556 EPHB4P54760 987 aa20.43■□□□□ 0.86
CLK4-211ENST00000522556 XRRA1Q6P2D8 792 aa20.43■□□□□ 0.86
CLK4-211ENST00000522556 KCNV1Q6PIU1 500 aa20.43■□□□□ 0.86
CLK4-211ENST00000522556 CRYGNQ8WXF5 182 aa20.43■□□□□ 0.86
CLK4-211ENST00000522556 UIMC1Q96RL1 719 aa20.43■□□□□ 0.86
CLK4-211ENST00000522556 PPP1R12CQ9BZL4 782 aa20.43■□□□□ 0.86
CLK4-211ENST00000522556 EDIL3O43854 480 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 DEXIO95424 95 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 ARP10275 920 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 TGFB3P10600 412 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 ARHGAP4P98171 946 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 AP3B2Q13367 1082 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 DGKDQ16760 1214 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 BRDTQ58F21 947 aaPredicted RBP20.42■□□□□ 0.86
CLK4-211ENST00000522556 FAM47CQ5HY64 1035 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 TRIM50Q86XT4 487 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 TRIM22Q8IYM9 498 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 REXO1Q8N1G1 1221 aaKnown RBP20.42■□□□□ 0.86
CLK4-211ENST00000522556 GTF3C6Q969F1 213 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 GPRASP2Q96D09 838 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 UBE2OQ9C0C9 1292 aaKnown RBP20.42■□□□□ 0.86
CLK4-211ENST00000522556 MLXIPQ9HAP2 919 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 C6orf50Q9HD87 102 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 JADE2Q9NQC1 790 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 MROH7Q68CQ1 1323 aa20.42■□□□□ 0.86
CLK4-211ENST00000522556 JAK2O60674 1132 aa20.41■□□□□ 0.86
CLK4-211ENST00000522556 EIF5BO60841 1220 aaKnown RBP20.41■□□□□ 0.86
CLK4-211ENST00000522556 CYP2C9P11712 490 aa20.41■□□□□ 0.86
CLK4-211ENST00000522556 FDPSP14324 419 aaKnown RBP20.41■□□□□ 0.86
CLK4-211ENST00000522556 RBM25P49756 843 aaKnown RBP20.41■□□□□ 0.86
CLK4-211ENST00000522556 MTMR1Q13613 665 aa20.41■□□□□ 0.86
CLK4-211ENST00000522556 HIC1Q14526 733 aa20.41■□□□□ 0.86
CLK4-211ENST00000522556 ANKRD1Q15327 319 aa20.41■□□□□ 0.86
CLK4-211ENST00000522556 METTL7BQ6UX53 244 aa20.41■□□□□ 0.86
CLK4-211ENST00000522556 NLRX1Q86UT6 975 aa20.41■□□□□ 0.86
CLK4-211ENST00000522556 CTAGE1Q96RT6 745 aa20.41■□□□□ 0.86
CLK4-211ENST00000522556 LBHD1Q9BQE6 289 aaPredicted RBP20.41■□□□□ 0.86
CLK4-211ENST00000522556 MXRA8Q9BRK3 442 aa20.41■□□□□ 0.86
CLK4-211ENST00000522556 C16orf70Q9BSU1 422 aa20.41■□□□□ 0.86
CLK4-211ENST00000522556 KCNJ14Q9UNX9 436 aa20.41■□□□□ 0.86
CLK4-211ENST00000522556 TRIP12Q14669 1992 aaPredicted RBP20.41■□□□□ 0.86
CLK4-211ENST00000522556 FAM86B1E9PN63 330 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms