RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 TBC1D10CQ8IV04 446 aa13.09□□□□□ -0.31
CSMD1-210ENST00000521646 SPIRE2Q8WWL2 714 aa13.09□□□□□ -0.31
CSMD1-210ENST00000521646 TBC1D5Q92609 795 aa13.09□□□□□ -0.31
CSMD1-210ENST00000521646 ASB2Q96Q27 587 aa13.09□□□□□ -0.31
CSMD1-210ENST00000521646 SPC25Q9HBM1 224 aa13.09□□□□□ -0.31
CSMD1-210ENST00000521646 COL4A4P53420 1690 aaPredicted RBP13.08□□□□□ -0.31
CSMD1-210ENST00000521646 TLR3O15455 904 aaKnown RBP13.08□□□□□ -0.32
CSMD1-210ENST00000521646 RANBP6O60518 1105 aaKnown RBP13.08□□□□□ -0.32
CSMD1-210ENST00000521646 FGAP02671 866 aa13.08□□□□□ -0.32
CSMD1-210ENST00000521646 PDHBP11177 359 aa13.08□□□□□ -0.32
CSMD1-210ENST00000521646 IGFBP4P22692 258 aa13.08□□□□□ -0.32
CSMD1-210ENST00000521646 EDNRBP24530 442 aa13.08□□□□□ -0.32
CSMD1-210ENST00000521646 CCDC96Q2M329 555 aa13.08□□□□□ -0.32
CSMD1-210ENST00000521646 IQSEC1Q6DN90 963 aa13.08□□□□□ -0.32
CSMD1-210ENST00000521646 PARP9Q8IXQ6 854 aa13.08□□□□□ -0.32
CSMD1-210ENST00000521646 ADAMTS19Q8TE59 1207 aa13.08□□□□□ -0.32
CSMD1-210ENST00000521646 SYMPKQ92797 1274 aaKnown RBP13.08□□□□□ -0.32
CSMD1-210ENST00000521646 GPATCH3Q96I76 525 aa13.08□□□□□ -0.32
CSMD1-210ENST00000521646 NACAP1Q9BZK3 213 aa13.08□□□□□ -0.32
CSMD1-210ENST00000521646 CERS4Q9HA82 394 aa13.08□□□□□ -0.32
CSMD1-210ENST00000521646 VTA1Q9NP79 307 aa13.08□□□□□ -0.32
CSMD1-210ENST00000521646 COL20A1Q9P218 1284 aa13.08□□□□□ -0.32
CSMD1-210ENST00000521646 ZBTB24O43167 697 aaPredicted RBP13.07□□□□□ -0.32
CSMD1-210ENST00000521646 CD2BP2O95400 341 aaKnown RBP13.07□□□□□ -0.32
CSMD1-210ENST00000521646 FDX1P10109 184 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 BMP1P13497 986 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 KCNQ1P51787 676 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 HAND2P61296 217 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 NBPF20Q3BBV1 942 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 SYDE2Q5VT97 1194 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 DEFB128Q7Z7B8 93 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 GAS2L1Q99501 681 aaPredicted RBP13.07□□□□□ -0.32
CSMD1-210ENST00000521646 WDR11Q9BZH6 1224 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 CHMP4BQ9H444 224 aaKnown RBP13.07□□□□□ -0.32
CSMD1-210ENST00000521646 ZNF287Q9HBT7 754 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 THEGQ9P2T0 379 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 Q9Y3F1 56 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 BRWD1Q9NSI6 2320 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 TNKSO95271 1327 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 NEDD4P46934 1319 aa13.07□□□□□ -0.32
CSMD1-210ENST00000521646 TRIP12Q14669 1992 aaPredicted RBP13.07□□□□□ -0.32
CSMD1-210ENST00000521646 CABYRO75952 493 aa13.06□□□□□ -0.32
CSMD1-210ENST00000521646 CA3P07451 260 aa13.06□□□□□ -0.32
CSMD1-210ENST00000521646 GOLGA8HP0CJ92 632 aa13.06□□□□□ -0.32
CSMD1-210ENST00000521646 SNHG28P0DPA3 235 aa13.06□□□□□ -0.32
CSMD1-210ENST00000521646 CALML3P27482 149 aa13.06□□□□□ -0.32
CSMD1-210ENST00000521646 RPS6P62753 249 aaKnown RBP13.06□□□□□ -0.32
CSMD1-210ENST00000521646 ALX1Q15699 326 aa13.06□□□□□ -0.32
CSMD1-210ENST00000521646 RAB30Q15771 203 aa13.06□□□□□ -0.32
CSMD1-210ENST00000521646 DCAF4Q8WV16 495 aa13.06□□□□□ -0.32
CSMD1-210ENST00000521646 ATXN2LQ8WWM7 1075 aaKnown RBP13.06□□□□□ -0.32
CSMD1-210ENST00000521646 DHX38Q92620 1227 aaKnown RBP13.06□□□□□ -0.32
CSMD1-210ENST00000521646 AP5M1Q9H0R1 490 aa13.06□□□□□ -0.32
CSMD1-210ENST00000521646 PTPDC1A2A3K4 754 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 LCHNA4D1U4 455 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 LPXNO60711 386 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 MYL3P08590 195 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 HSPD1P10809 573 aaKnown RBP13.05□□□□□ -0.32
CSMD1-210ENST00000521646 ATP2A2P16615 1042 aaKnown RBP13.05□□□□□ -0.32
CSMD1-210ENST00000521646 NDUFV2P19404 249 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 PDE1AP54750 535 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 PDE4DQ08499 809 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 ZNF543Q08ER8 600 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 NMIQ13287 307 aaPredicted RBP13.05□□□□□ -0.32
CSMD1-210ENST00000521646 RRP12Q5JTH9 1297 aaKnown RBP13.05□□□□□ -0.32
CSMD1-210ENST00000521646 PPP2R2DQ66LE6 453 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 KAT2BQ92831 832 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 WNT8BQ93098 351 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 ZKSCAN3Q9BRR0 538 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 IL25Q9H293 177 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 SLC28A3Q9HAS3 691 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 MSRAQ9UJ68 235 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 MTCH2Q9Y6C9 303 aa13.05□□□□□ -0.32
CSMD1-210ENST00000521646 ZBBXA8MT70 800 aa13.04□□□□□ -0.32
CSMD1-210ENST00000521646 ERC2O15083 957 aa13.04□□□□□ -0.32
CSMD1-210ENST00000521646 RPIAP49247 311 aa13.04□□□□□ -0.32
CSMD1-210ENST00000521646 TAP1Q03518 808 aa13.04□□□□□ -0.32
CSMD1-210ENST00000521646 CCDC62Q6P9F0 684 aa13.04□□□□□ -0.32
CSMD1-210ENST00000521646 MICALL1Q8N3F8 863 aa13.04□□□□□ -0.32
CSMD1-210ENST00000521646 OR6J1Q8NGC5 347 aa13.04□□□□□ -0.32
CSMD1-210ENST00000521646 CRBNQ96SW2 442 aa13.04□□□□□ -0.32
CSMD1-210ENST00000521646 UHRF1Q96T88 793 aaPredicted RBP13.04□□□□□ -0.32
CSMD1-210ENST00000521646 UBA5Q9GZZ9 404 aa13.04□□□□□ -0.32
CSMD1-210ENST00000521646 TCP11L1Q9NUJ3 509 aa13.04□□□□□ -0.32
CSMD1-210ENST00000521646 PCDHA11Q9Y5I1 949 aa13.04□□□□□ -0.32
CSMD1-210ENST00000521646 SLC4A7Q9Y6M7 1214 aa13.04□□□□□ -0.32
CSMD1-210ENST00000521646 LAMA4Q16363 1823 aa13.04□□□□□ -0.32
CSMD1-210ENST00000521646 A6NJR5 290 aa13.03□□□□□ -0.32
CSMD1-210ENST00000521646 OPLAHO14841 1288 aa13.03□□□□□ -0.32
CSMD1-210ENST00000521646 SLC3A2P08195 630 aaKnown RBP13.03□□□□□ -0.32
CSMD1-210ENST00000521646 IQCF3P0C7M6 154 aa13.03□□□□□ -0.32
CSMD1-210ENST00000521646 TOP1P11387 765 aaKnown RBP13.03□□□□□ -0.32
CSMD1-210ENST00000521646 MMP16P51512 607 aa13.03□□□□□ -0.32
CSMD1-210ENST00000521646 MRPS5P82675 430 aaKnown RBP13.03□□□□□ -0.32
CSMD1-210ENST00000521646 SLC35G1Q2M3R5 365 aa13.03□□□□□ -0.32
CSMD1-210ENST00000521646 ANKRD45Q5TZF3 282 aa13.03□□□□□ -0.32
CSMD1-210ENST00000521646 TRAF7Q6Q0C0 670 aa13.03□□□□□ -0.32
CSMD1-210ENST00000521646 RNF207Q6ZRF8 634 aa13.03□□□□□ -0.32
CSMD1-210ENST00000521646 OSBPL7Q9BZF2 842 aa13.03□□□□□ -0.32
CSMD1-210ENST00000521646 C5orf42Q9H799 3197 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms