RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 PTPN11Q06124 597 aaPredicted RBP8.79□□□□□ -1
CTNNA1-227ENST00000521387 RING1Q06587 406 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 TRIM71Q2Q1W2 868 aaKnown RBP8.79□□□□□ -1
CTNNA1-227ENST00000521387 ZKSCAN2Q63HK3 967 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 SNRNP48Q6IEG0 339 aaKnown RBP8.79□□□□□ -1
CTNNA1-227ENST00000521387 GDF6Q6KF10 455 aaPredicted RBP8.79□□□□□ -1
CTNNA1-227ENST00000521387 SLC4A10Q6U841 1118 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 EEPD1Q7L9B9 569 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 SPATA5Q8NB90 893 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 DBF4BQ8NFT6 615 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 ATP8B4Q8TF62 1192 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 XAGE2Q96GT9 111 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 YME1L1Q96TA2 773 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 TEX13BQ9BXU2 312 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 OSBPL7Q9BZF2 842 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 MFSD1Q9H3U5 465 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 SMC4Q9NTJ3 1288 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 POLR3EQ9NVU0 708 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 CDH22Q9UJ99 828 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 PCDHB15Q9Y5E8 787 aa8.79□□□□□ -1
CTNNA1-227ENST00000521387 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.78□□□□□ -1
CTNNA1-227ENST00000521387 C1QTNF9BB2RNN3 333 aa8.78□□□□□ -1
CTNNA1-227ENST00000521387 C2CD4DB7Z1M9 353 aa8.78□□□□□ -1
CTNNA1-227ENST00000521387 AMHP03971 560 aa8.78□□□□□ -1
CTNNA1-227ENST00000521387 C1QTNF9P0C862 333 aa8.78□□□□□ -1
CTNNA1-227ENST00000521387 NRIP1P48552 1158 aa8.78□□□□□ -1
CTNNA1-227ENST00000521387 PTGISQ16647 500 aa8.78□□□□□ -1
CTNNA1-227ENST00000521387 SOWAHCQ53LP3 525 aaPredicted RBP8.78□□□□□ -1
CTNNA1-227ENST00000521387 RBM23Q86U06 439 aaKnown RBP8.78□□□□□ -1
CTNNA1-227ENST00000521387 FBXO16Q8IX29 292 aaPredicted RBP8.78□□□□□ -1
CTNNA1-227ENST00000521387 ANP32EQ9BTT0 268 aa8.78□□□□□ -1
CTNNA1-227ENST00000521387 PARD6AQ9NPB6 346 aa8.78□□□□□ -1
CTNNA1-227ENST00000521387 NOB1Q9ULX3 412 aaKnown RBP8.78□□□□□ -1
CTNNA1-227ENST00000521387 PLAGL2Q9UPG8 496 aa8.78□□□□□ -1
CTNNA1-227ENST00000521387 VPS9D1Q9Y2B5 631 aa8.78□□□□□ -1
CTNNA1-227ENST00000521387 CACNA1FO60840 1977 aa8.78□□□□□ -1
CTNNA1-227ENST00000521387 DMXL2Q8TDJ6 3036 aa8.78□□□□□ -1
CTNNA1-227ENST00000521387 USP9XQ93008 2570 aaPredicted RBP8.78□□□□□ -1
CTNNA1-227ENST00000521387 WDFY3Q8IZQ1 3526 aa8.78□□□□□ -1
CTNNA1-227ENST00000521387 UPP2O95045 317 aa8.77□□□□□ -1.01
CTNNA1-227ENST00000521387 PARNO95453 639 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-227ENST00000521387 LMNB2Q03252 620 aa8.77□□□□□ -1.01
CTNNA1-227ENST00000521387 AAMPQ13685 434 aa8.77□□□□□ -1.01
CTNNA1-227ENST00000521387 MVPQ14764 893 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-227ENST00000521387 DUSP28Q4G0W2 176 aa8.77□□□□□ -1.01
CTNNA1-227ENST00000521387 PPP4R3BQ5MIZ7 849 aa8.77□□□□□ -1.01
CTNNA1-227ENST00000521387 NAA16Q6N069 864 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-227ENST00000521387 ANKRD35Q8N283 1001 aa8.77□□□□□ -1.01
CTNNA1-227ENST00000521387 KDF1Q8NAX2 398 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-227ENST00000521387 RTP3Q9BQQ7 232 aa8.77□□□□□ -1.01
CTNNA1-227ENST00000521387 C11orf84Q9BUA3 381 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-227ENST00000521387 MYH1P12882 1939 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 ITPR1Q14643 2758 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 MPHOSPH10O00566 681 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 ATP2A1O14983 1001 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 PPP1R37O75864 691 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 TRIM27P14373 513 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 SLC4A3P48751 1232 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 ALDH1L2Q3SY69 923 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 FAM83BQ5T0W9 1011 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 ZNF618Q5T7W0 954 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 N4BP2L1Q5TBK1 243 aaPredicted RBP8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 SYCE2Q6PIF2 218 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 KIAA1211Q6ZU35 1233 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 MAML2Q8IZL2 1156 aaPredicted RBP8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 MRPL50Q8N5N7 158 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 SPPL3Q8TCT6 385 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 PTCD2Q8WV60 388 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 CLP1Q92989 425 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 NOL10Q9BSC4 688 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 USP44Q9H0E7 712 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 RC3H2Q9HBD1 1191 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 RAVER2Q9HCJ3 691 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 ERVK-5Q9HDB9 667 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 LRP2BPQ9P2M1 347 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 PA2G4Q9UQ80 394 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 NOD1Q9Y239 953 aa8.76□□□□□ -1.01
CTNNA1-227ENST00000521387 IGSF10Q6WRI0 2623 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 SLC30A4O14863 429 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 PER2O15055 1255 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 AKR1B1P15121 316 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 IL15P40933 162 aaPredicted RBP8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 KCNC3Q14003 757 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 PLEKHG4Q58EX7 1191 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 Q6ZNB5 142 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 TMEM179Q6ZVK1 233 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 TTC6Q86TZ1 520 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 SESTD1Q86VW0 696 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 CPXCR1Q8N123 301 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 FIBCD1Q8N539 461 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 TMEM57Q8N5G2 664 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 CCDC155Q8N6L0 562 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 GPR161Q8N6U8 529 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 PURBQ96QR8 312 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 NUP88Q99567 741 aaPredicted RBP8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 LAMA5O15230 3695 aa8.75□□□□□ -1.01
CTNNA1-227ENST00000521387 ASB14A6NK59 587 aa8.74□□□□□ -1.01
CTNNA1-227ENST00000521387 SRRM3A6NNA2 597 aaPredicted RBP8.74□□□□□ -1.01
CTNNA1-227ENST00000521387 STK25O00506 426 aa8.74□□□□□ -1.01
CTNNA1-227ENST00000521387 ITGB1P05556 798 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms