RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CELF3Q5SZQ8 465 aaKnown RBP23.67■■□□□ 1.38
TRIM35-203ENST00000521253 MYSM1Q5VVJ2 828 aa23.67■■□□□ 1.38
TRIM35-203ENST00000521253 LBHD1Q9BQE6 289 aaPredicted RBP23.67■■□□□ 1.38
TRIM35-203ENST00000521253 GLT8D2Q9H1C3 349 aa23.67■■□□□ 1.38
TRIM35-203ENST00000521253 TPCN1Q9ULQ1 816 aa23.67■■□□□ 1.38
TRIM35-203ENST00000521253 SPATA31C2B4DYI2 1134 aa23.66■■□□□ 1.38
TRIM35-203ENST00000521253 CPLX1O14810 134 aa23.66■■□□□ 1.38
TRIM35-203ENST00000521253 KIAA0355O15063 1070 aa23.66■■□□□ 1.38
TRIM35-203ENST00000521253 FIBPO43427 364 aa23.66■■□□□ 1.38
TRIM35-203ENST00000521253 ITGB8P26012 769 aa23.66■■□□□ 1.38
TRIM35-203ENST00000521253 PPTC7Q8NI37 304 aa23.66■■□□□ 1.38
TRIM35-203ENST00000521253 PGBD1Q96JS3 809 aa23.66■■□□□ 1.38
TRIM35-203ENST00000521253 SEZ6LQ9BYH1 1024 aa23.66■■□□□ 1.38
TRIM35-203ENST00000521253 TMEM260Q9NX78 707 aa23.66■■□□□ 1.38
TRIM35-203ENST00000521253 TBX21Q9UL17 535 aa23.66■■□□□ 1.38
TRIM35-203ENST00000521253 ESYT2A0FGR8 921 aa23.65■■□□□ 1.38
TRIM35-203ENST00000521253 FOSP01100 380 aaPredicted RBP23.65■■□□□ 1.38
TRIM35-203ENST00000521253 CLK2P49760 499 aaKnown RBP23.65■■□□□ 1.38
TRIM35-203ENST00000521253 ANKRD1Q15327 319 aa23.65■■□□□ 1.38
TRIM35-203ENST00000521253 NLRX1Q86UT6 975 aa23.65■■□□□ 1.38
TRIM35-203ENST00000521253 CCDC12Q8WUD4 166 aaPredicted RBP23.65■■□□□ 1.38
TRIM35-203ENST00000521253 BADQ92934 168 aa23.65■■□□□ 1.38
TRIM35-203ENST00000521253 ANO3Q9BYT9 981 aa23.65■■□□□ 1.38
TRIM35-203ENST00000521253 UBE2OQ9C0C9 1292 aaKnown RBP23.65■■□□□ 1.38
TRIM35-203ENST00000521253 ZMYND12Q9H0C1 365 aa23.65■■□□□ 1.38
TRIM35-203ENST00000521253 BCAS3Q9H6U6 928 aa23.65■■□□□ 1.38
TRIM35-203ENST00000521253 EHMT1Q9H9B1 1298 aa23.65■■□□□ 1.38
TRIM35-203ENST00000521253 LAMA3Q16787 3333 aa23.65■■□□□ 1.38
TRIM35-203ENST00000521253 TLR3O15455 904 aaKnown RBP23.64■■□□□ 1.37
TRIM35-203ENST00000521253 CD4P01730 458 aa23.64■■□□□ 1.37
TRIM35-203ENST00000521253 ITGB5P18084 799 aa23.64■■□□□ 1.37
TRIM35-203ENST00000521253 NEK4P51957 841 aa23.64■■□□□ 1.37
TRIM35-203ENST00000521253 SSRP1Q08945 709 aaKnown RBP23.64■■□□□ 1.37
TRIM35-203ENST00000521253 SCRN1Q12765 414 aa23.64■■□□□ 1.37
TRIM35-203ENST00000521253 DGKDQ16760 1214 aa23.64■■□□□ 1.37
TRIM35-203ENST00000521253 NBPF20Q3BBV1 942 aa23.64■■□□□ 1.37
TRIM35-203ENST00000521253 HSDL1Q3SXM5 330 aa23.64■■□□□ 1.37
TRIM35-203ENST00000521253 TRIM22Q8IYM9 498 aa23.64■■□□□ 1.37
TRIM35-203ENST00000521253 SPATA33Q96N06 139 aa23.64■■□□□ 1.37
TRIM35-203ENST00000521253 TRPV6Q9H1D0 765 aa23.64■■□□□ 1.37
TRIM35-203ENST00000521253 SLKQ9H2G2 1235 aaPredicted RBP23.64■■□□□ 1.37
TRIM35-203ENST00000521253 MLXIPQ9HAP2 919 aa23.64■■□□□ 1.37
TRIM35-203ENST00000521253 ADAMTS3O15072 1205 aa23.63■■□□□ 1.37
TRIM35-203ENST00000521253 PFKFB2O60825 505 aa23.63■■□□□ 1.37
TRIM35-203ENST00000521253 RAG1P15918 1043 aa23.63■■□□□ 1.37
TRIM35-203ENST00000521253 AP3B2Q13367 1082 aa23.63■■□□□ 1.37
TRIM35-203ENST00000521253 CPLX2Q6PUV4 134 aaKnown RBP23.63■■□□□ 1.37
TRIM35-203ENST00000521253 PPP1R13LQ8WUF5 828 aa23.63■■□□□ 1.37
TRIM35-203ENST00000521253 KAT2BQ92831 832 aa23.63■■□□□ 1.37
TRIM35-203ENST00000521253 GPRASP2Q96D09 838 aa23.63■■□□□ 1.37
TRIM35-203ENST00000521253 C6orf50Q9HD87 102 aa23.63■■□□□ 1.37
TRIM35-203ENST00000521253 VPS54Q9P1Q0 977 aa23.63■■□□□ 1.37
TRIM35-203ENST00000521253 UBIAD1Q9Y5Z9 338 aa23.63■■□□□ 1.37
TRIM35-203ENST00000521253 A0A1W2PPC1 479 aa23.62■■□□□ 1.37
TRIM35-203ENST00000521253 B4GALT4O60513 344 aa23.62■■□□□ 1.37
TRIM35-203ENST00000521253 HOXD8P13378 290 aaPredicted RBP23.62■■□□□ 1.37
TRIM35-203ENST00000521253 NEDD9Q14511 834 aa23.62■■□□□ 1.37
TRIM35-203ENST00000521253 JAKMIP3Q5VZ66 844 aa23.62■■□□□ 1.37
TRIM35-203ENST00000521253 METTL7BQ6UX53 244 aa23.62■■□□□ 1.37
TRIM35-203ENST00000521253 DEXIO95424 95 aa23.61■■□□□ 1.37
TRIM35-203ENST00000521253 GNA11P29992 359 aa23.61■■□□□ 1.37
TRIM35-203ENST00000521253 SREBF1P36956 1147 aa23.61■■□□□ 1.37
TRIM35-203ENST00000521253 CHMP4BP1P59074 171 aa23.61■■□□□ 1.37
TRIM35-203ENST00000521253 NFRKBQ6P4R8 1299 aa23.61■■□□□ 1.37
TRIM35-203ENST00000521253 CYFIP1Q7L576 1253 aa23.61■■□□□ 1.37
TRIM35-203ENST00000521253 REXO1Q8N1G1 1221 aaKnown RBP23.61■■□□□ 1.37
TRIM35-203ENST00000521253 CCDC148Q8NFR7 591 aa23.61■■□□□ 1.37
TRIM35-203ENST00000521253 CDHR1Q96JP9 859 aa23.61■■□□□ 1.37
TRIM35-203ENST00000521253 SENP7Q9BQF6 1050 aa23.61■■□□□ 1.37
TRIM35-203ENST00000521253 JADE2Q9NQC1 790 aa23.61■■□□□ 1.37
TRIM35-203ENST00000521253 TRMT13Q9NUP7 481 aaKnown RBP23.61■■□□□ 1.37
TRIM35-203ENST00000521253 SCN10AQ9Y5Y9 1956 aa23.61■■□□□ 1.37
TRIM35-203ENST00000521253 LTBP2Q14767 1821 aa23.61■■□□□ 1.37
TRIM35-203ENST00000521253 ATP9AO75110 1047 aa23.6■■□□□ 1.37
TRIM35-203ENST00000521253 PPFIA4O75335 1185 aa23.6■■□□□ 1.37
TRIM35-203ENST00000521253 TIMP1P01033 207 aa23.6■■□□□ 1.37
TRIM35-203ENST00000521253 ZNF286BP0CG31 522 aa23.6■■□□□ 1.37
TRIM35-203ENST00000521253 MTMR1Q13613 665 aa23.6■■□□□ 1.37
TRIM35-203ENST00000521253 FAM47CQ5HY64 1035 aa23.6■■□□□ 1.37
TRIM35-203ENST00000521253 SH3GLB2Q9NR46 395 aa23.6■■□□□ 1.37
TRIM35-203ENST00000521253 CDKL5O76039 1030 aa23.59■■□□□ 1.37
TRIM35-203ENST00000521253 LARGE1O95461 756 aa23.59■■□□□ 1.37
TRIM35-203ENST00000521253 F2P00734 622 aa23.59■■□□□ 1.37
TRIM35-203ENST00000521253 KCNA2P16389 499 aa23.59■■□□□ 1.37
TRIM35-203ENST00000521253 ME3Q16798 604 aa23.59■■□□□ 1.37
TRIM35-203ENST00000521253 TDHQ8IZJ6 230 aa23.59■■□□□ 1.37
TRIM35-203ENST00000521253 CYP2W1Q8TAV3 490 aa23.59■■□□□ 1.37
TRIM35-203ENST00000521253 AIFM3Q96NN9 605 aa23.59■■□□□ 1.37
TRIM35-203ENST00000521253 MXRA8Q9BRK3 442 aa23.59■■□□□ 1.37
TRIM35-203ENST00000521253 NOP56O00567 594 aaKnown RBP23.58■■□□□ 1.37
TRIM35-203ENST00000521253 PSEN2P49810 448 aa23.58■■□□□ 1.37
TRIM35-203ENST00000521253 ARHGAP4P98171 946 aa23.58■■□□□ 1.37
TRIM35-203ENST00000521253 PTPN11Q06124 597 aaPredicted RBP23.58■■□□□ 1.37
TRIM35-203ENST00000521253 CEP55Q53EZ4 464 aa23.58■■□□□ 1.37
TRIM35-203ENST00000521253 NECAB1Q8N987 351 aa23.58■■□□□ 1.37
TRIM35-203ENST00000521253 BICD2Q8TD16 824 aa23.58■■□□□ 1.37
TRIM35-203ENST00000521253 RASGRP4Q8TDF6 673 aa23.58■■□□□ 1.37
TRIM35-203ENST00000521253 C22orf23Q9BZE7 217 aa23.58■■□□□ 1.37
TRIM35-203ENST00000521253 PPP1R12CQ9BZL4 782 aa23.58■■□□□ 1.37
TRIM35-203ENST00000521253 PKD2L1Q9P0L9 805 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms