RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 KLF18A0A0U1RQI7 1052 aa19.62■□□□□ 0.73
SQLE-205ENST00000521232 SPATA31C2B4DYI2 1134 aa19.62■□□□□ 0.73
SQLE-205ENST00000521232 PCNX4Q63HM2 1172 aa19.62■□□□□ 0.73
SQLE-205ENST00000521232 RPUSD2Q8IZ73 545 aaKnown RBP19.62■□□□□ 0.73
SQLE-205ENST00000521232 FBXL16Q8N461 479 aa19.62■□□□□ 0.73
SQLE-205ENST00000521232 SPATA33Q96N06 139 aa19.62■□□□□ 0.73
SQLE-205ENST00000521232 JAKMIP1Q96N16 626 aaKnown RBP19.62■□□□□ 0.73
SQLE-205ENST00000521232 FAM217BQ9NTX9 383 aaPredicted RBP19.62■□□□□ 0.73
SQLE-205ENST00000521232 PPP4R2Q9NY27 417 aa19.62■□□□□ 0.73
SQLE-205ENST00000521232 RTEL1Q9NZ71 1219 aa19.62■□□□□ 0.73
SQLE-205ENST00000521232 HAS3O00219 553 aa19.61■□□□□ 0.73
SQLE-205ENST00000521232 F2P00734 622 aa19.61■□□□□ 0.73
SQLE-205ENST00000521232 FGBP02675 491 aa19.61■□□□□ 0.73
SQLE-205ENST00000521232 CPA1P15085 419 aa19.61■□□□□ 0.73
SQLE-205ENST00000521232 PSEN2P49810 448 aa19.61■□□□□ 0.73
SQLE-205ENST00000521232 SEMA3FQ13275 785 aa19.61■□□□□ 0.73
SQLE-205ENST00000521232 ZNF697Q5TEC3 545 aa19.61■□□□□ 0.73
SQLE-205ENST00000521232 BLOC1S2Q6QNY1 142 aa19.61■□□□□ 0.73
SQLE-205ENST00000521232 Q6ZUG5 572 aa19.61■□□□□ 0.73
SQLE-205ENST00000521232 HERVK_113Q902F9 699 aa19.61■□□□□ 0.73
SQLE-205ENST00000521232 VWCEQ96DN2 955 aa19.61■□□□□ 0.73
SQLE-205ENST00000521232 KATNAL1Q9BW62 490 aa19.61■□□□□ 0.73
SQLE-205ENST00000521232 MLXIPQ9HAP2 919 aa19.61■□□□□ 0.73
SQLE-205ENST00000521232 V9GY48 417 aaPredicted RBP19.61■□□□□ 0.73
SQLE-205ENST00000521232 TRIP12Q14669 1992 aaPredicted RBP19.61■□□□□ 0.73
SQLE-205ENST00000521232 GOLGA8AA7E2F4 631 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 GOLGA8BA8MQT2 603 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 PITPNM1O00562 1244 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 FIBPO43427 364 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 CDC27P30260 824 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 CHMP4BP1P59074 171 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 FGD1P98174 961 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 NEDD9Q14511 834 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 PTGISQ16647 500 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 GDF6Q6KF10 455 aaPredicted RBP19.6■□□□□ 0.73
SQLE-205ENST00000521232 HEATR3Q7Z4Q2 680 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 TEX2Q8IWB9 1127 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 SCLYQ96I15 445 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 CTAGE1Q96RT6 745 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 SEMA6BQ9H3T3 888 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 BCAS3Q9H6U6 928 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 STXBP5LQ9Y2K9 1186 aa19.6■□□□□ 0.73
SQLE-205ENST00000521232 SORBS3O60504 671 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 ZNF286BP0CG31 522 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 RPS6KB1P23443 525 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 PSMA5P28066 241 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 BFSP2Q13515 415 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 MFSD10Q14728 455 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 KIAA0753Q2KHM9 967 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 WWC2Q6AWC2 1192 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 C7orf31Q8N865 590 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 GUCD1Q96NT3 240 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 SENP7Q9BQF6 1050 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 C16orf70Q9BSU1 422 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 ALG1Q9BT22 464 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 AGXT2Q9BYV1 514 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 HDAC6Q9UBN7 1215 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 GTF2IRD1Q9UHL9 959 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 NOD1Q9Y239 953 aa19.59■□□□□ 0.73
SQLE-205ENST00000521232 CCDC196A0A1B0GTZ2 297 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 PFKMP08237 780 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 IQCF3P0C7M6 154 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 ADD1P35611 737 aaKnown RBP19.58■□□□□ 0.72
SQLE-205ENST00000521232 APOBRQ0VD83 1088 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 UBE2SQ16763 222 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 TYW1BQ6NUM6 668 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 PPP1R18Q6NYC8 613 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 METTL7BQ6UX53 244 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 NLRX1Q86UT6 975 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 RETREG2Q8NC44 543 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 BRF1Q92994 677 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 FAM161BQ96MY7 647 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 TTYH1Q9H313 450 aaPredicted RBP19.58■□□□□ 0.72
SQLE-205ENST00000521232 PCDHA6Q9UN73 950 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 PCDHA8Q9Y5H6 950 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 SCN5AQ14524 2016 aa19.58■□□□□ 0.72
SQLE-205ENST00000521232 A0A0C4DFX4 3053 aa19.57■□□□□ 0.72
SQLE-205ENST00000521232 TMEM265A0A087WTH1 108 aa19.57■□□□□ 0.72
SQLE-205ENST00000521232 SPDYE3A6NKU9 549 aa19.57■□□□□ 0.72
SQLE-205ENST00000521232 hCG_1984214I3L0E3 225 aa19.57■□□□□ 0.72
SQLE-205ENST00000521232 RFC2P35250 354 aa19.57■□□□□ 0.72
SQLE-205ENST00000521232 METAP2P50579 478 aaKnown RBP eCLIP19.57■□□□□ 0.72
SQLE-205ENST00000521232 CYFIP1Q7L576 1253 aa19.57■□□□□ 0.72
SQLE-205ENST00000521232 OTOP2Q7RTS6 562 aa19.57■□□□□ 0.72
SQLE-205ENST00000521232 ZNF713Q8N859 430 aaPredicted RBP19.57■□□□□ 0.72
SQLE-205ENST00000521232 CAGE1Q8TC20 777 aa19.57■□□□□ 0.72
SQLE-205ENST00000521232 GPRASP2Q96D09 838 aa19.57■□□□□ 0.72
SQLE-205ENST00000521232 USP26Q9BXU7 913 aa19.57■□□□□ 0.72
SQLE-205ENST00000521232 MTIF3Q9H2K0 278 aaKnown RBP19.57■□□□□ 0.72
SQLE-205ENST00000521232 RIC8AQ9NPQ8 531 aa19.57■□□□□ 0.72
SQLE-205ENST00000521232 BARHL2Q9NY43 387 aa19.57■□□□□ 0.72
SQLE-205ENST00000521232 CXXC1Q9P0U4 656 aaPredicted RBP19.57■□□□□ 0.72
SQLE-205ENST00000521232 DOCK5Q9H7D0 1870 aa19.56■□□□□ 0.72
SQLE-205ENST00000521232 STXBP3O00186 592 aa19.56■□□□□ 0.72
SQLE-205ENST00000521232 NAPAP54920 295 aa19.56■□□□□ 0.72
SQLE-205ENST00000521232 GIMAP8Q8ND71 665 aaPredicted RBP19.56■□□□□ 0.72
SQLE-205ENST00000521232 CDHR1Q96JP9 859 aa19.56■□□□□ 0.72
SQLE-205ENST00000521232 GPR20Q99678 358 aa19.56■□□□□ 0.72
SQLE-205ENST00000521232 NAP1L2Q9ULW6 460 aaPredicted RBP19.56■□□□□ 0.72
SQLE-205ENST00000521232 UBIAD1Q9Y5Z9 338 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms