RNA–Protein interactions for RNA: ENST00000520926.1

MTCL1-210, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 4

Gene MTCL1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-210ENST00000520926 SLC26A6Q9BXS9 759 aa13.19□□□□□ -0.3
MTCL1-210ENST00000520926 DDX41Q9UJV9 622 aaKnown RBP13.19□□□□□ -0.3
MTCL1-210ENST00000520926 MRVI1Q9Y6F6 885 aa13.19□□□□□ -0.3
MTCL1-210ENST00000520926 TRIP12Q14669 1992 aaPredicted RBP13.18□□□□□ -0.3
MTCL1-210ENST00000520926 MEIS2O14770 477 aa13.18□□□□□ -0.3
MTCL1-210ENST00000520926 MYL3P08590 195 aa13.18□□□□□ -0.3
MTCL1-210ENST00000520926 RAG1P15918 1043 aa13.18□□□□□ -0.3
MTCL1-210ENST00000520926 PSMC6P62333 389 aa13.18□□□□□ -0.3
MTCL1-210ENST00000520926 KCNV1Q6PIU1 500 aa13.18□□□□□ -0.3
MTCL1-210ENST00000520926 CPLX2Q6PUV4 134 aaKnown RBP13.18□□□□□ -0.3
MTCL1-210ENST00000520926 USP17L6PQ6QN14 398 aa13.18□□□□□ -0.3
MTCL1-210ENST00000520926 SLC43A3Q8NBI5 491 aa13.18□□□□□ -0.3
MTCL1-210ENST00000520926 IL31RAQ8NI17 732 aa13.18□□□□□ -0.3
MTCL1-210ENST00000520926 AIFM3Q96NN9 605 aa13.18□□□□□ -0.3
MTCL1-210ENST00000520926 MTG1Q9BT17 334 aaPredicted RBP13.18□□□□□ -0.3
MTCL1-210ENST00000520926 PSTPIP2Q9H939 334 aa13.18□□□□□ -0.3
MTCL1-210ENST00000520926 GRIN2DO15399 1336 aa13.17□□□□□ -0.3
MTCL1-210ENST00000520926 STK36Q9NRP7 1315 aa13.17□□□□□ -0.3
MTCL1-210ENST00000520926 STAM2O75886 525 aa13.17□□□□□ -0.3
MTCL1-210ENST00000520926 CDKL5O76039 1030 aa13.17□□□□□ -0.3
MTCL1-210ENST00000520926 RGS20O76081 388 aa13.17□□□□□ -0.3
MTCL1-210ENST00000520926 CD4P01730 458 aa13.17□□□□□ -0.3
MTCL1-210ENST00000520926 ITGB8P26012 769 aa13.17□□□□□ -0.3
MTCL1-210ENST00000520926 ARHGAP1Q07960 439 aa13.17□□□□□ -0.3
MTCL1-210ENST00000520926 PFKFB3Q16875 520 aaPredicted RBP13.17□□□□□ -0.3
MTCL1-210ENST00000520926 TYW1BQ6NUM6 668 aa13.17□□□□□ -0.3
MTCL1-210ENST00000520926 HEATR3Q7Z4Q2 680 aa13.17□□□□□ -0.3
MTCL1-210ENST00000520926 GPKOWQ92917 476 aaPredicted RBP eCLIP13.17□□□□□ -0.3
MTCL1-210ENST00000520926 EMID1Q96A84 441 aaPredicted RBP13.17□□□□□ -0.3
MTCL1-210ENST00000520926 INTS4Q96HW7 963 aaKnown RBP13.17□□□□□ -0.3
MTCL1-210ENST00000520926 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
MTCL1-210ENST00000520926 ORC3Q9UBD5 711 aaPredicted RBP13.17□□□□□ -0.3
MTCL1-210ENST00000520926 TBX21Q9UL17 535 aa13.17□□□□□ -0.3
MTCL1-210ENST00000520926 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
MTCL1-210ENST00000520926 LAMA3Q16787 3333 aa13.16□□□□□ -0.3
MTCL1-210ENST00000520926 DEXIO95424 95 aa13.16□□□□□ -0.3
MTCL1-210ENST00000520926 TIMP1P01033 207 aa13.16□□□□□ -0.3
MTCL1-210ENST00000520926 MMP3P08254 477 aa13.16□□□□□ -0.3
MTCL1-210ENST00000520926 TGFB3P10600 412 aa13.16□□□□□ -0.3
MTCL1-210ENST00000520926 SCG2P13521 617 aa13.16□□□□□ -0.3
MTCL1-210ENST00000520926 LAMC2Q13753 1193 aa13.16□□□□□ -0.3
MTCL1-210ENST00000520926 GNPTABQ3T906 1256 aa13.16□□□□□ -0.3
MTCL1-210ENST00000520926 WWC2Q6AWC2 1192 aa13.16□□□□□ -0.3
MTCL1-210ENST00000520926 DHX37Q8IY37 1157 aaKnown RBP13.16□□□□□ -0.3
MTCL1-210ENST00000520926 TRIM22Q8IYM9 498 aa13.16□□□□□ -0.3
MTCL1-210ENST00000520926 AFG1LQ8WV93 481 aa13.16□□□□□ -0.3
MTCL1-210ENST00000520926 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
MTCL1-210ENST00000520926 GJB4Q9NTQ9 266 aa13.16□□□□□ -0.3
MTCL1-210ENST00000520926 SZT2Q5T011 3432 aa13.15□□□□□ -0.3
MTCL1-210ENST00000520926 TANC1Q9C0D5 1861 aa13.15□□□□□ -0.3
MTCL1-210ENST00000520926 hCG_1984214I3L0E3 225 aa13.15□□□□□ -0.3
MTCL1-210ENST00000520926 STXBP3O00186 592 aa13.15□□□□□ -0.3
MTCL1-210ENST00000520926 GJB2P29033 226 aa13.15□□□□□ -0.3
MTCL1-210ENST00000520926 ANP32AP39687 249 aaKnown RBP13.15□□□□□ -0.3
MTCL1-210ENST00000520926 NAPAP54920 295 aa13.15□□□□□ -0.3
MTCL1-210ENST00000520926 MRPS9P82933 396 aaKnown RBP13.15□□□□□ -0.3
MTCL1-210ENST00000520926 BECN1Q14457 450 aa13.15□□□□□ -0.3
MTCL1-210ENST00000520926 LRIT3Q3SXY7 679 aa13.15□□□□□ -0.3
MTCL1-210ENST00000520926 PCNX4Q63HM2 1172 aa13.15□□□□□ -0.3
MTCL1-210ENST00000520926 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
MTCL1-210ENST00000520926 XRRA1Q6P2D8 792 aa13.15□□□□□ -0.3
MTCL1-210ENST00000520926 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
MTCL1-210ENST00000520926 SPRYD3Q8NCJ5 442 aa13.15□□□□□ -0.3
MTCL1-210ENST00000520926 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.15□□□□□ -0.3
MTCL1-210ENST00000520926 SCN5AQ14524 2016 aa13.15□□□□□ -0.3
MTCL1-210ENST00000520926 SPDYE3A6NKU9 549 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 SOX1O00570 391 aaPredicted RBP13.14□□□□□ -0.31
MTCL1-210ENST00000520926 ADAMTS3O15072 1205 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 B4GALT4O60513 344 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 GGPS1O95749 300 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 UBA1P22314 1058 aaKnown RBP13.14□□□□□ -0.31
MTCL1-210ENST00000520926 ICAM3P32942 547 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 HMGN5P82970 282 aaKnown RBP13.14□□□□□ -0.31
MTCL1-210ENST00000520926 AKAP17AQ02040 695 aaKnown RBP13.14□□□□□ -0.31
MTCL1-210ENST00000520926 FPGSQ05932 587 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 DGKDQ16760 1214 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 UBE2SQ16763 222 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 NBPF20Q3BBV1 942 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 FAM47CQ5HY64 1035 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 CELF3Q5SZQ8 465 aaKnown RBP13.14□□□□□ -0.31
MTCL1-210ENST00000520926 MYSM1Q5VVJ2 828 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 MFSD5Q6N075 450 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 NFRKBQ6P4R8 1299 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 TEX2Q8IWB9 1127 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 PPTC7Q8NI37 304 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 INPP4AQ96PE3 977 aaPredicted RBP13.14□□□□□ -0.31
MTCL1-210ENST00000520926 ALG1Q9BT22 464 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 BARHL2Q9NY43 387 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 RTEL1Q9NZ71 1219 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 VPS54Q9P1Q0 977 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 SMC3Q9UQE7 1217 aa13.14□□□□□ -0.31
MTCL1-210ENST00000520926 SPATA31C2B4DYI2 1134 aa13.13□□□□□ -0.31
MTCL1-210ENST00000520926 FIBPO43427 364 aa13.13□□□□□ -0.31
MTCL1-210ENST00000520926 SUPT20HL2P0C7V6 817 aa13.13□□□□□ -0.31
MTCL1-210ENST00000520926 SP2Q02086 613 aa13.13□□□□□ -0.31
MTCL1-210ENST00000520926 PTPN11Q06124 597 aaPredicted RBP13.13□□□□□ -0.31
MTCL1-210ENST00000520926 SHHQ15465 462 aa13.13□□□□□ -0.31
MTCL1-210ENST00000520926 NPY5RQ15761 445 aa13.13□□□□□ -0.31
MTCL1-210ENST00000520926 NLRX1Q86UT6 975 aa13.13□□□□□ -0.31
MTCL1-210ENST00000520926 TMEM199Q8N511 208 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms