RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 EDIL3O43854 480 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 MFAP3LO75121 409 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 RPS12P25398 132 aaKnown RBP11.11□□□□□ -0.63
SPARC-202ENST00000520687 SREBF1P36956 1147 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 LRRC63Q05C16 580 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 TUBB2AQ13885 445 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 UBE2SQ16763 222 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 TSR1Q2NL82 804 aaKnown RBP11.11□□□□□ -0.63
SPARC-202ENST00000520687 SMAP1Q8IYB5 467 aaPredicted RBP11.11□□□□□ -0.63
SPARC-202ENST00000520687 GPC2Q8N158 579 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 CSGALNACT2Q8N6G5 542 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 SAMD3Q8N6K7 520 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 CRYGNQ8WXF5 182 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 HAS1Q92839 578 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 PNMA5Q96PV4 448 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 TUBB2BQ9BVA1 445 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 BLOC1S4Q9NUP1 217 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 GDAQ9Y2T3 454 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 PPP2R2CQ9Y2T4 447 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 SIPA1L1O43166 1804 aa11.1□□□□□ -0.63
SPARC-202ENST00000520687 USP27XA6NNY8 438 aa11.1□□□□□ -0.63
SPARC-202ENST00000520687 MEIS2O14770 477 aa11.1□□□□□ -0.63
SPARC-202ENST00000520687 TEX33O43247 280 aa11.1□□□□□ -0.63
SPARC-202ENST00000520687 CCDC175P0C221 793 aa11.1□□□□□ -0.63
SPARC-202ENST00000520687 STAT2P52630 851 aa11.1□□□□□ -0.63
SPARC-202ENST00000520687 ARHGAP4P98171 946 aa11.1□□□□□ -0.63
SPARC-202ENST00000520687 IKQ13123 557 aaPredicted RBP11.1□□□□□ -0.63
SPARC-202ENST00000520687 CENPPQ6IPU0 288 aa11.1□□□□□ -0.63
SPARC-202ENST00000520687 ZBED3Q96IU2 234 aaPredicted RBP11.1□□□□□ -0.63
SPARC-202ENST00000520687 TSG101Q99816 390 aa11.1□□□□□ -0.63
SPARC-202ENST00000520687 CCDC94Q9BW85 323 aaPredicted RBP11.1□□□□□ -0.63
SPARC-202ENST00000520687 L2HGDHQ9H9P8 463 aa11.1□□□□□ -0.63
SPARC-202ENST00000520687 MRPL11Q9Y3B7 192 aaKnown RBP11.1□□□□□ -0.63
SPARC-202ENST00000520687 PCDHAC2Q9Y5I4 1007 aa11.1□□□□□ -0.63
SPARC-202ENST00000520687 MYH4Q9Y623 1939 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 TRAF5O00463 557 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 GDF11O95390 407 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 ASNSP08243 561 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 MUTP22033 750 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 UBXN1Q04323 297 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 RBL2Q08999 1139 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 TNFAIP1Q13829 316 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 HSP90AA4PQ58FG1 418 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 FIGNQ5HY92 759 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 CYP26C1Q6V0L0 522 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 IRF2BP1Q8IU81 584 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 REXO1L1PQ8IX06 675 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 CCDC65Q8IXS2 484 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 ZNF710Q8N1W2 664 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 MB21D1Q8N884 522 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 ERO1AQ96HE7 468 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 DEFB129Q9H1M3 183 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 VCPKMTQ9H867 229 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 FEM1BQ9UK73 627 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 ZBTB21Q9ULJ3 1066 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 PRR12Q9ULL5 1215 aa11.09□□□□□ -0.63
SPARC-202ENST00000520687 COLQQ9Y215 455 aaPredicted RBP11.09□□□□□ -0.63
SPARC-202ENST00000520687 MYMKA6NI61 221 aa11.08□□□□□ -0.64
SPARC-202ENST00000520687 TCP10L2B9ZVM9 353 aa11.08□□□□□ -0.64
SPARC-202ENST00000520687 RAD21O60216 631 aa11.08□□□□□ -0.64
SPARC-202ENST00000520687 RAD17O75943 681 aa11.08□□□□□ -0.64
SPARC-202ENST00000520687 CELF2O95319 508 aaKnown RBP11.08□□□□□ -0.64
SPARC-202ENST00000520687 SLU7O95391 586 aaKnown RBP11.08□□□□□ -0.64
SPARC-202ENST00000520687 CCT6AP40227 531 aaKnown RBP11.08□□□□□ -0.64
SPARC-202ENST00000520687 ADKP55263 362 aaKnown RBP11.08□□□□□ -0.64
SPARC-202ENST00000520687 TUBB4BP68371 445 aa11.08□□□□□ -0.64
SPARC-202ENST00000520687 EHHADHQ08426 723 aa11.08□□□□□ -0.64
SPARC-202ENST00000520687 MCM6Q14566 821 aa11.08□□□□□ -0.64
SPARC-202ENST00000520687 FKBP15Q5T1M5 1219 aa11.08□□□□□ -0.64
SPARC-202ENST00000520687 USP50Q70EL3 339 aaPredicted RBP11.08□□□□□ -0.64
SPARC-202ENST00000520687 CCDC84Q86UT8 332 aaPredicted RBP11.08□□□□□ -0.64
SPARC-202ENST00000520687 OR8K1Q8NGG5 319 aa11.08□□□□□ -0.64
SPARC-202ENST00000520687 ZNF507Q8TCN5 953 aa11.08□□□□□ -0.64
SPARC-202ENST00000520687 JDP2Q8WYK2 163 aa11.08□□□□□ -0.64
SPARC-202ENST00000520687 ZNF592Q92610 1267 aa11.08□□□□□ -0.64
SPARC-202ENST00000520687 PLIN2Q99541 437 aa11.08□□□□□ -0.64
SPARC-202ENST00000520687 DUSP9Q99956 384 aaKnown RBP11.08□□□□□ -0.64
SPARC-202ENST00000520687 A0A1W2PQJ5 194 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 FAM196BA6NMK8 535 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 USP17L15C9J2P7 530 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 USP17L13C9JLJ4 530 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 USP17L11C9JVI0 530 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 USP17L18D6R9N7 530 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 USP17L22D6RA61 530 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 USP17L17D6RBQ6 530 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 USP17L19D6RCP7 530 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 USP17L20D6RJB6 530 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 GNA14O95837 355 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 CAP2P40123 477 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 USP17L24Q0WX57 530 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 STK4Q13043 487 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 USP17L6PQ6QN14 398 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 PDCL2Q8N4E4 241 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 ETNPPLQ8TBG4 499 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 DDX12PQ92771 950 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 HOOK2Q96ED9 719 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 TUBGCP2Q9BSJ2 902 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 POLR3CQ9BUI4 534 aaPredicted RBP11.07□□□□□ -0.64
SPARC-202ENST00000520687 EDEM3Q9BZQ6 932 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 VPS16Q9H269 839 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms