RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 PLIN2Q99541 437 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 GZF1Q9H116 711 aaPredicted RBP19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 DACT1Q9NYF0 836 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 TMEM63CQ9P1W3 806 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 DDX39AO00148 427 aaKnown RBP19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 LAD1O00515 517 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 STRNO43815 780 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 ALDH1A1P00352 501 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 SP2Q02086 613 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 SPIRE1Q08AE8 756 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 ORC2Q13416 577 aaPredicted RBP19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 CAVIN1Q6NZI2 390 aaKnown RBP19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 SEPT14Q6ZU15 432 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 DPP9Q86TI2 863 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 FMR1NBQ8N0W7 255 aaPredicted RBP19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 ZNF579Q8NAF0 562 aaKnown RBP19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 TRIM47Q96LD4 638 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 NAP1L4Q99733 375 aaKnown RBP19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 MMTAG2Q9BU76 263 aaKnown RBP19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 AGO4Q9HCK5 861 aaKnown RBP19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 TSKSQ9UJT2 592 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 GJD2Q9UKL4 321 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 PCDHA12Q9UN75 941 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 HPSEQ9Y251 543 aa19.22■□□□□ 0.67
TSNARE1-205ENST00000520166 MCM3APO60318 1980 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 A0A087WWV3 80 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 EML1O00423 815 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 DHX15O43143 795 aaKnown RBP19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 HSPA6P17066 643 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 MTMR1Q13613 665 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 STXBP2Q15833 593 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 KLHL40Q2TBA0 621 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 IGSF22Q8N9C0 903 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 SLC5A5Q92911 643 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 INPP4AQ96PE3 977 aaPredicted RBP19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 IWS1Q96ST2 819 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 ZNF577Q9BSK1 485 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 MAF1Q9H063 256 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 FLRT1Q9NZU1 646 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 VAV3Q9UKW4 847 aa19.21■□□□□ 0.67
TSNARE1-205ENST00000520166 SLC15A5A6NIM6 579 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 IPO5O00410 1097 aaKnown RBP19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 PSMD10O75832 226 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 FXR2P51116 673 aaKnown RBP eCLIP19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 PDE4DQ08499 809 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 ZRSR1Q15695 479 aaKnown RBP19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 CAMK4Q16566 473 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 ECM1Q16610 540 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 CCL14Q16627 93 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 FBXO16Q8IX29 292 aaPredicted RBP19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 ABRAQ8N0Z2 381 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 PDGFCQ9NRA1 345 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 ADD3Q9UEY8 706 aaKnown RBP19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 GABRQQ9UN88 632 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 CHMP2AO43633 222 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 CYP2B6P20813 491 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 LONP1P36776 959 aaKnown RBP19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 PSMC4P43686 418 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 LACTBP83111 547 aaPredicted RBP19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 KARSQ15046 597 aaKnown RBP19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 USP6NLQ92738 828 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 ERCC4Q92889 916 aaPredicted RBP19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 KCNH3Q9ULD8 1083 aa19.2■□□□□ 0.66
TSNARE1-205ENST00000520166 PLXNA1Q9UIW2 1896 aa19.19■□□□□ 0.66
TSNARE1-205ENST00000520166 TNPO2O14787 897 aaKnown RBP19.19■□□□□ 0.66
TSNARE1-205ENST00000520166 POLR2DO15514 142 aaKnown RBP19.19■□□□□ 0.66
TSNARE1-205ENST00000520166 EIF3JO75822 258 aaKnown RBP19.19■□□□□ 0.66
TSNARE1-205ENST00000520166 LONRF3Q496Y0 759 aa19.19■□□□□ 0.66
TSNARE1-205ENST00000520166 LRCH2Q5VUJ6 765 aa19.19■□□□□ 0.66
TSNARE1-205ENST00000520166 ARMCX2Q7L311 632 aa19.19■□□□□ 0.66
TSNARE1-205ENST00000520166 OTOP1Q7RTM1 612 aa19.19■□□□□ 0.66
TSNARE1-205ENST00000520166 MAML3Q96JK9 1138 aa19.19■□□□□ 0.66
TSNARE1-205ENST00000520166 FAM20AQ96MK3 541 aa19.19■□□□□ 0.66
TSNARE1-205ENST00000520166 LRWD1Q9UFC0 647 aa19.19■□□□□ 0.66
TSNARE1-205ENST00000520166 KIAA1217Q5T5P2 1943 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 FAM237AA0A1B0GTK4 181 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 SPATA31C2B4DYI2 1134 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 TBX3O15119 743 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 FOXN1O15353 648 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 ZNF202O95125 648 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 ARIH2O95376 493 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 SNAI1O95863 264 aaPredicted RBP19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 FAM160A1Q05DH4 1040 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 MAP2K5Q13163 448 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 PRAMEF19Q5SWL8 479 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 NCAPH2Q6IBW4 605 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 XRRA1Q6P2D8 792 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 NIPA1Q7RTP0 329 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 REM2Q8IYK8 340 aaPredicted RBP19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 SLFN12Q8IYM2 578 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 UNC45AQ9H3U1 944 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 LRRC37A2A6NM11 1700 aa19.18■□□□□ 0.66
TSNARE1-205ENST00000520166 MBD3O95983 291 aa19.17■□□□□ 0.66
TSNARE1-205ENST00000520166 KCNA2P16389 499 aa19.17■□□□□ 0.66
TSNARE1-205ENST00000520166 CCDC73Q6ZRK6 1079 aa19.17■□□□□ 0.66
TSNARE1-205ENST00000520166 MORC4Q8TE76 937 aa19.17■□□□□ 0.66
TSNARE1-205ENST00000520166 DOCK5Q9H7D0 1870 aa19.17■□□□□ 0.66
TSNARE1-205ENST00000520166 CCNE2O96020 404 aa19.17■□□□□ 0.66
TSNARE1-205ENST00000520166 SYKP43405 635 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms