RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 DIS3L2Q8IYB7 885 aaKnown RBP5.76□□□□□ -1.49
SDC2-204ENST00000519914 ZNF654Q8IZM8 581 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 CCAR2Q8N163 923 aaKnown RBP5.76□□□□□ -1.49
SDC2-204ENST00000519914 FANCBQ8NB91 859 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 CCDC112Q8NEF3 446 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 WFDC12Q8WWY7 111 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 ANKS1AQ92625 1134 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 ESR2Q92731 530 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 PHKBQ93100 1093 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 IFT43Q96FT9 208 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 AIFM3Q96NN9 605 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 LPIN3Q9BQK8 851 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 CCDC94Q9BW85 323 aaPredicted RBP5.76□□□□□ -1.49
SDC2-204ENST00000519914 SLC26A6Q9BXS9 759 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 L2HGDHQ9H9P8 463 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 EFCC1Q9HA90 598 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 GJB4Q9NTQ9 266 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 HOOK1Q9UJC3 728 aaKnown RBP5.76□□□□□ -1.49
SDC2-204ENST00000519914 KCNH3Q9ULD8 1083 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 CEP131Q9UPN4 1083 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 NIP7Q9Y221 180 aaKnown RBP eCLIP5.76□□□□□ -1.49
SDC2-204ENST00000519914 SLC4A4Q9Y6R1 1079 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 NAV1Q8NEY1 1877 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 FOCADQ5VW36 1801 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 KRTAP9-6A0A140TA67 174 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 CCP110O43303 1012 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 HYAL3O43820 417 aaPredicted RBP5.75□□□□□ -1.49
SDC2-204ENST00000519914 MICAL2O94851 1124 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 SKILP12757 684 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 CYP7A1P22680 504 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 IGFBP4P22692 258 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 ERCC5P28715 1186 aaPredicted RBP5.75□□□□□ -1.49
SDC2-204ENST00000519914 LMOD1P29536 600 aaPredicted RBP5.75□□□□□ -1.49
SDC2-204ENST00000519914 MARCKSP29966 332 aaPredicted RBP5.75□□□□□ -1.49
SDC2-204ENST00000519914 INPP5BP32019 993 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 GUCY1A2P33402 732 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 TRAPPC10P48553 1259 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 FANCCQ00597 558 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 SLC20A2Q08357 652 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 DMTNQ08495 405 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 TROAPQ12815 778 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 TBX2Q13207 712 aaPredicted RBP5.75□□□□□ -1.49
SDC2-204ENST00000519914 MORC3Q14149 939 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 ZRSR1Q15695 479 aaKnown RBP5.75□□□□□ -1.49
SDC2-204ENST00000519914 LONRF3Q496Y0 759 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 ARMCX5Q6P1M9 558 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 C15orf52Q6ZUT6 534 aaKnown RBP5.75□□□□□ -1.49
SDC2-204ENST00000519914 ADGRA1Q86SQ6 560 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 WFDC8Q8IUA0 241 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 ANKMY2Q8IV38 441 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 FOXP4Q8IVH2 680 aaPredicted RBP5.75□□□□□ -1.49
SDC2-204ENST00000519914 VSTM4Q8IW00 320 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 MLKLQ8NB16 471 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 ENOX1Q8TC92 643 aaKnown RBP5.75□□□□□ -1.49
SDC2-204ENST00000519914 ZNF384Q8TF68 577 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 VTI1AQ96AJ9 217 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 NSUN4Q96CB9 384 aaKnown RBP5.75□□□□□ -1.49
SDC2-204ENST00000519914 SHISA4Q96DD7 197 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 FAM84BQ96KN1 310 aaPredicted RBP5.75□□□□□ -1.49
SDC2-204ENST00000519914 CALR3Q96L12 384 aaKnown RBP5.75□□□□□ -1.49
SDC2-204ENST00000519914 PHF20Q9BVI0 1012 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 XPO4Q9C0E2 1151 aaKnown RBP5.75□□□□□ -1.49
SDC2-204ENST00000519914 NYXQ9GZU5 481 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 ANKRD2Q9GZV1 360 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 FAM13BQ9NYF5 915 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 MINPP1Q9UNW1 487 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 TNKSO95271 1327 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 LRRC37AA6NMS7 1700 aa5.75□□□□□ -1.49
SDC2-204ENST00000519914 BTBD18B2RXH4 712 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 USP17L15C9J2P7 530 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 USP17L10C9JJH3 530 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 USP17L13C9JLJ4 530 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 USP17L12C9JPN9 530 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 USP17L11C9JVI0 530 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 USP17L21D6R901 530 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 USP17L18D6R9N7 530 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 USP17L22D6RA61 530 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 USP17L17D6RBQ6 530 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 USP17L19D6RCP7 530 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 USP17L20D6RJB6 530 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 SNAP23O00161 211 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 NRDCO43847 1150 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 RPS6KA4O75676 772 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 XBP1P17861 261 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 RXRAP19793 462 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 BMP6P22004 513 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 NOS3P29474 1203 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 ARSDP51689 593 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 NCBP1Q09161 790 aaKnown RBP5.74□□□□□ -1.49
SDC2-204ENST00000519914 USP17L24Q0WX57 530 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 POSTNQ15063 836 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 NPY5RQ15761 445 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 VPS72Q15906 364 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 GRIK5Q16478 980 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 PCSK7Q16549 785 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 TPD52L1Q16890 204 aaPredicted RBP5.74□□□□□ -1.49
SDC2-204ENST00000519914 CCDC93Q567U6 631 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 CAVIN4Q5BKX8 364 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 CEP135Q66GS9 1140 aa5.74□□□□□ -1.49
SDC2-204ENST00000519914 E4F1Q66K89 784 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms