RNA–Protein interactions for RNA: ENST00000519686.6

VNN3-212, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-212ENST00000519686 PCDHA1Q9Y5I3 950 aa10.52□□□□□ -0.73
VNN3-212ENST00000519686 SLC4A7Q9Y6M7 1214 aa10.52□□□□□ -0.73
VNN3-212ENST00000519686 KIAA1217Q5T5P2 1943 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 EIF3JO75822 258 aaKnown RBP10.51□□□□□ -0.73
VNN3-212ENST00000519686 MMP3P08254 477 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 CYP21A2P08686 494 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 MYCLP12524 364 aaPredicted RBP10.51□□□□□ -0.73
VNN3-212ENST00000519686 ACTN1P12814 892 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 CASTP20810 708 aaKnown RBP10.51□□□□□ -0.73
VNN3-212ENST00000519686 RFC2P35250 354 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 PTH1RQ03431 593 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 PTPN11Q06124 597 aaPredicted RBP10.51□□□□□ -0.73
VNN3-212ENST00000519686 BFSP2Q13515 415 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 WTAPQ15007 396 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 DGKDQ16760 1214 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 CATIPQ7Z7H3 387 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 CCDC155Q8N6L0 562 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 PPP1R13LQ8WUF5 828 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 AFG1LQ8WV93 481 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 PXMP2Q9NR77 195 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 MAP3K20Q9NYL2 800 aaKnown RBP10.51□□□□□ -0.73
VNN3-212ENST00000519686 CXXC1Q9P0U4 656 aaPredicted RBP10.51□□□□□ -0.73
VNN3-212ENST00000519686 MRVI1Q9Y6F6 885 aa10.51□□□□□ -0.73
VNN3-212ENST00000519686 PALM3A6NDB9 673 aaPredicted RBP10.5□□□□□ -0.73
VNN3-212ENST00000519686 E7EWF7 191 aa10.5□□□□□ -0.73
VNN3-212ENST00000519686 NR3C2P08235 984 aa10.5□□□□□ -0.73
VNN3-212ENST00000519686 ATP2A2P16615 1042 aaKnown RBP10.5□□□□□ -0.73
VNN3-212ENST00000519686 HSD17B4P51659 736 aa10.5□□□□□ -0.73
VNN3-212ENST00000519686 ARHGAP1Q07960 439 aa10.5□□□□□ -0.73
VNN3-212ENST00000519686 GRM4Q14833 912 aa10.5□□□□□ -0.73
VNN3-212ENST00000519686 PTGISQ16647 500 aa10.5□□□□□ -0.73
VNN3-212ENST00000519686 TMEM67Q5HYA8 995 aa10.5□□□□□ -0.73
VNN3-212ENST00000519686 CCDC62Q6P9F0 684 aa10.5□□□□□ -0.73
VNN3-212ENST00000519686 DHX37Q8IY37 1157 aaKnown RBP10.5□□□□□ -0.73
VNN3-212ENST00000519686 SAMD3Q8N6K7 520 aa10.5□□□□□ -0.73
VNN3-212ENST00000519686 KATNAL1Q9BW62 490 aa10.5□□□□□ -0.73
VNN3-212ENST00000519686 FTOQ9C0B1 505 aaKnown RBP eCLIP10.5□□□□□ -0.73
VNN3-212ENST00000519686 NKX2-4Q9H2Z4 354 aa10.5□□□□□ -0.73
VNN3-212ENST00000519686 PRDM12Q9H4Q4 367 aa10.5□□□□□ -0.73
VNN3-212ENST00000519686 SCN10AQ9Y5Y9 1956 aa10.49□□□□□ -0.73
VNN3-212ENST00000519686 GCOM1H8Y6P7 765 aaPredicted RBP10.49□□□□□ -0.73
VNN3-212ENST00000519686 SGSM2O43147 1006 aa10.49□□□□□ -0.73
VNN3-212ENST00000519686 PPP1R11O60927 126 aaPredicted RBP10.49□□□□□ -0.73
VNN3-212ENST00000519686 POLR2MP0CAP2 368 aa10.49□□□□□ -0.73
VNN3-212ENST00000519686 HOXA13P31271 388 aaPredicted RBP10.49□□□□□ -0.73
VNN3-212ENST00000519686 LAMC2Q13753 1193 aa10.49□□□□□ -0.73
VNN3-212ENST00000519686 PPP2R2DQ66LE6 453 aa10.49□□□□□ -0.73
VNN3-212ENST00000519686 KCNV1Q6PIU1 500 aa10.49□□□□□ -0.73
VNN3-212ENST00000519686 C7orf31Q8N865 590 aa10.49□□□□□ -0.73
VNN3-212ENST00000519686 PPM1EQ8WY54 764 aa10.49□□□□□ -0.73
VNN3-212ENST00000519686 MTMR8Q96EF0 704 aa10.49□□□□□ -0.73
VNN3-212ENST00000519686 PIGSQ96S52 555 aa10.49□□□□□ -0.73
VNN3-212ENST00000519686 COL25A1Q9BXS0 654 aaPredicted RBP10.49□□□□□ -0.73
VNN3-212ENST00000519686 DDX41Q9UJV9 622 aaKnown RBP10.49□□□□□ -0.73
VNN3-212ENST00000519686 PCDHGA10Q9Y5H3 936 aa10.49□□□□□ -0.73
VNN3-212ENST00000519686 UNC80Q8N2C7 3258 aa10.49□□□□□ -0.73
VNN3-212ENST00000519686 GBF1Q92538 1859 aa10.49□□□□□ -0.73
VNN3-212ENST00000519686 TANC1Q9C0D5 1861 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 PNMA6FA0A0J9YX94 578 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 OPLAHO14841 1288 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 IQCF3P0C7M6 154 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 IGFBP4P22692 258 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 CCND2P30279 289 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 KIF5BP33176 963 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 RABGGTBP53611 331 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 PGM5Q15124 567 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 CASC1Q6TDU7 716 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 NFXL1Q6ZNB6 911 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 STOX1Q6ZVD7 989 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 FCHSD1Q86WN1 690 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 PPTC7Q8NI37 304 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 CTCFLQ8NI51 663 aaPredicted RBP10.48□□□□□ -0.73
VNN3-212ENST00000519686 CAGE1Q8TC20 777 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 PIBF1Q8WXW3 757 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 EMID1Q96A84 441 aaPredicted RBP10.48□□□□□ -0.73
VNN3-212ENST00000519686 PDCD2LQ9BRP1 358 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 ALG1Q9BT22 464 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 RIOX1Q9H6W3 641 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 PCDHA11Q9Y5I1 949 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 RBM8AQ9Y5S9 174 aaKnown RBP10.48□□□□□ -0.73
VNN3-212ENST00000519686 CDH23Q9H251 3354 aa10.48□□□□□ -0.73
VNN3-212ENST00000519686 EYSQ5T1H1 3165 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 A0A0C4DFX4 3053 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 SORBS3O60504 671 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 ZNF286BP0CG31 522 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 KCNJ6P48051 423 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 GHRHRQ02643 423 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 NBR1Q14596 966 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 GDF6Q6KF10 455 aaPredicted RBP10.47□□□□□ -0.73
VNN3-212ENST00000519686 SESTD1Q86VW0 696 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 AFAP1L1Q8TED9 768 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 MAP4K1Q92918 833 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 RRP36Q96EU6 259 aaKnown RBP10.47□□□□□ -0.73
VNN3-212ENST00000519686 SPATA33Q96N06 139 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 SLC9A7Q96T83 725 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 MLXIPQ9HAP2 919 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 SENP2Q9HC62 589 aa10.47□□□□□ -0.73
VNN3-212ENST00000519686 SEC63Q9UGP8 760 aaKnown RBP10.47□□□□□ -0.73
VNN3-212ENST00000519686 YBX2Q9Y2T7 364 aaKnown RBP10.47□□□□□ -0.73
VNN3-212ENST00000519686 SCN5AQ14524 2016 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms