RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 SIN3BO75182 1162 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 LRRN2O75325 713 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TBC1D8O95759 1140 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CST3P01034 146 aaPredicted RBP3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 APPP05067 770 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 POU2F2P09086 479 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 SLFN14P0C7P3 912 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 OSMP13725 252 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 AKAP5P24588 427 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 COPB2P35606 906 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PIK3CBP42338 1070 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CCT5P48643 541 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PRIM2P49643 509 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 SRSF2Q01130 221 aaKnown RBP3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 AMPD2Q01433 879 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ALDH6A1Q02252 535 aaKnown RBP3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ID3Q02535 119 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PTSQ03393 145 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FAPQ12884 760 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 SEMA5AQ13591 1074 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TTLL4Q14679 1199 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 SLC9A5Q14940 896 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 GRIK5Q16478 980 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FAM182BQ5T319 152 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ZNF468Q5VIY5 522 aaPredicted RBP3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 LHX8Q68G74 356 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FAM180BQ6P0A1 224 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CC2D1AQ6P1N0 951 aaPredicted RBP3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 C16orf54Q6UWD8 224 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 GPR155Q7Z3F1 870 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 SRGAP1Q7Z6B7 1085 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CCDC103Q8IW40 242 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TRIM22Q8IYM9 498 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CACTIN-AS1Q8N1I8 211 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 MIER2Q8N344 545 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CAMKK1Q8N5S9 505 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 EFHBQ8N7U6 833 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 C2orf69Q8N8R5 385 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 DEPTORQ8TB45 409 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 SYTL5Q8TDW5 730 aaPredicted RBP3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FRS2Q8WU20 508 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 VWCEQ96DN2 955 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CCDC140Q96MF4 163 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FANCD2OSQ96PS1 177 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FAM193BQ96PV7 902 aaPredicted RBP3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CELF4Q9BZC1 486 aaKnown RBP3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FAM204AQ9H8W3 233 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 IPPKQ9H8X2 491 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 RAD18Q9NS91 495 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 SMC4Q9NTJ3 1288 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TUBD1Q9UJT1 453 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 GDF2Q9UK05 429 aaPredicted RBP3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CBLCQ9ULV8 474 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PCDHB12Q9Y5F1 795 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FHOD1Q9Y613 1164 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 COL17A1Q9UMD9 1497 aaPredicted RBP3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 DVL2O14641 736 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FIBPO43427 364 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 MAN1A2O60476 641 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TUSC2O75896 110 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 RGS9O75916 674 aaPredicted RBP3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 UBXN7O94888 489 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 GRK2P25098 689 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PEX2P28328 305 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PPM1AP35813 382 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 GRK6P43250 576 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 KIF23Q02241 960 aaPredicted RBP3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TNFAIP2Q03169 654 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PAK1Q13153 545 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 G3BP1Q13283 466 aaKnown RBP eCLIP3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 MYBPC2Q14324 1141 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PDCD2Q16342 344 aaPredicted RBP3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 NBPF9Q3BBW0 867 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 UAP1L1Q3KQV9 507 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 RGL3Q3MIN7 710 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TOR2AQ5JU69 321 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ARMC3Q5W041 872 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 SWSAP1Q6NVH7 229 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FAM117BQ6P1L5 589 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CFAP161Q6P656 301 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 DARS2Q6PI48 645 aaKnown RBP3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 LBX2Q6XYB7 198 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 C1orf122Q6ZSJ8 110 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TTLL7Q6ZT98 887 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CDC37L1Q7L3B6 337 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 RSRC2Q7L4I2 434 aaKnown RBP3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TMC3Q7Z5M5 1100 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CDH24Q86UP0 819 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 OR2C3Q8N628 320 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PPM1NQ8N819 430 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 SPATA5Q8NB90 893 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 GALNT11Q8NCW6 608 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 RNF214Q8ND24 703 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 DNAJB8Q8NHS0 232 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 NPLOC4Q8TAT6 608 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 NSUN6Q8TEA1 469 aaKnown RBP3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TNFRSF25Q93038 417 aa3.25□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ISL2Q96A47 359 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms