RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 NLRX1Q86UT6 975 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 CCDC12Q8WUD4 166 aaPredicted RBP12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 CDHR1Q96JP9 859 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 SENP7Q9BQF6 1050 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 ALDH8A1Q9H2A2 487 aaPredicted RBP12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 MLXIPQ9HAP2 919 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 RTEL1Q9NZ71 1219 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 PCDHA6Q9UN73 950 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 PCDHA8Q9Y5H6 950 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 KIAA1217Q5T5P2 1943 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 MAFGO15525 162 aa12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 GGPS1O95749 300 aa12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 ITGB8P26012 769 aa12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 CCT2P78371 535 aaKnown RBP12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 SP2Q02086 613 aa12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 NTRK3Q16288 839 aa12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 UBE2SQ16763 222 aa12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 NBPF20Q3BBV1 942 aa12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 LRIT3Q3SXY7 679 aa12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 MCTP2Q6DN12 878 aa12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 MFSD5Q6N075 450 aa12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 TYW1BQ6NUM6 668 aa12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 CPLX2Q6PUV4 134 aaKnown RBP12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 GIMAP8Q8ND71 665 aaPredicted RBP12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 ZFP91Q96JP5 570 aaPredicted RBP12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 SPATA33Q96N06 139 aa12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 RNF26Q9BY78 433 aaPredicted RBP12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 TRPV6Q9H1D0 765 aa12.84□□□□□ -0.35
SCARNA16.1-201ENST00000516133 ESYT2A0FGR8 921 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 CPLX1O14810 134 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 HOXD8P13378 290 aaPredicted RBP12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 UBA1P22314 1058 aaKnown RBP12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 GNA11P29992 359 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 FPGSQ05932 587 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 AP3B2Q13367 1082 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 ANKRD1Q15327 319 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 HSDL1Q3SXM5 330 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 FAM47CQ5HY64 1035 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 METTL7BQ6UX53 244 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 TRIM22Q8IYM9 498 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 TMEM199Q8N511 208 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 PHKBQ93100 1093 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 GPRASP2Q96D09 838 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 IL17RAQ96F46 866 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 KATNAL1Q9BW62 490 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 ZMYND12Q9H0C1 365 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 HIPK3Q9H422 1215 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 C6orf50Q9HD87 102 aa12.83□□□□□ -0.36
SCARNA16.1-201ENST00000516133 NOP56O00567 594 aaKnown RBP12.82□□□□□ -0.36
SCARNA16.1-201ENST00000516133 B4GALT4O60513 344 aa12.82□□□□□ -0.36
SCARNA16.1-201ENST00000516133 CHMP4BP1P59074 171 aa12.82□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SSRP1Q08945 709 aaKnown RBP12.82□□□□□ -0.36
SCARNA16.1-201ENST00000516133 PKN1Q16512 942 aa12.82□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SESTD1Q86VW0 696 aa12.82□□□□□ -0.36
SCARNA16.1-201ENST00000516133 BICD2Q8TD16 824 aa12.82□□□□□ -0.36
SCARNA16.1-201ENST00000516133 KAT2BQ92831 832 aa12.82□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SLC26A6Q9BXS9 759 aa12.82□□□□□ -0.36
SCARNA16.1-201ENST00000516133 NCOA5Q9HCD5 579 aaKnown RBP12.82□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SH3GLB2Q9NR46 395 aa12.82□□□□□ -0.36
SCARNA16.1-201ENST00000516133 PCDH10Q9P2E7 1040 aa12.82□□□□□ -0.36
SCARNA16.1-201ENST00000516133 UBIAD1Q9Y5Z9 338 aa12.82□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SCN10AQ9Y5Y9 1956 aa12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SZT2Q5T011 3432 aa12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 F2P00734 622 aa12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 ITGB5P18084 799 aa12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 CLK2P49760 499 aaKnown RBP12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SEMA3FQ13275 785 aa12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 PPIGQ13427 754 aaKnown RBP eCLIP12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 MTMR1Q13613 665 aa12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SHHQ15465 462 aa12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 CYFIP1Q7L576 1253 aa12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 C7orf31Q8N865 590 aa12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 CCDC148Q8NFR7 591 aa12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 LARP6Q9BRS8 491 aaKnown RBP12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 NOC4LQ9BVI4 516 aaKnown RBP12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SLKQ9H2G2 1235 aaPredicted RBP12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 JADE2Q9NQC1 790 aa12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 TRMT13Q9NUP7 481 aaKnown RBP12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 NOD1Q9Y239 953 aa12.81□□□□□ -0.36
SCARNA16.1-201ENST00000516133 LAMA2P24043 3122 aaKnown RBP12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 MYH7BA7E2Y1 1941 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 HAS3O00219 553 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SORBS3O60504 671 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 CDKL5O76039 1030 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SLC34A2O95436 690 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SEC24BO95487 1268 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 CYP2C18P33260 490 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 ZNF76P36508 570 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 SREBF1P36956 1147 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 PSEN2P49810 448 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 MFSD10Q14728 455 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 KIAA0753Q2KHM9 967 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 CEP55Q53EZ4 464 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 GPR153Q6NV75 609 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 FAM177A1Q8N128 213 aaPredicted RBP12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 REXO1Q8N1G1 1221 aaKnown RBP12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 MXRA8Q9BRK3 442 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 ANO3Q9BYT9 981 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 PPP1R12CQ9BZL4 782 aa12.8□□□□□ -0.36
SCARNA16.1-201ENST00000516133 H3BRB1 525 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms