RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 MYSM1Q5VVJ2 828 aa22.21■■□□□ 1.15
LMNA-225ENST00000515824 SLKQ9H2G2 1235 aaPredicted RBP22.21■■□□□ 1.15
LMNA-225ENST00000515824 PRO3102Q9H379 93 aa22.21■■□□□ 1.15
LMNA-225ENST00000515824 MLXIPQ9HAP2 919 aa22.21■■□□□ 1.15
LMNA-225ENST00000515824 C6orf50Q9HD87 102 aa22.21■■□□□ 1.15
LMNA-225ENST00000515824 KIAA1217Q5T5P2 1943 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 ESYT2A0FGR8 921 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 TRIM43BA6NCK2 446 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 PPFIA3O75145 1194 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 GGPS1O95749 300 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 GNA11P29992 359 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 NEK4P51957 841 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 PSMC6P62333 389 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 AP3B2Q13367 1082 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 NEDD9Q14511 834 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 SH3RF1Q7Z6J0 888 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 PPTC7Q8NI37 304 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 TRIM43Q96BQ3 446 aaPredicted RBP22.2■■□□□ 1.14
LMNA-225ENST00000515824 ZMYND12Q9H0C1 365 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 TPCN1Q9ULQ1 816 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 GRIN2DO15399 1336 aa22.2■■□□□ 1.14
LMNA-225ENST00000515824 KIAA0355O15063 1070 aa22.19■■□□□ 1.14
LMNA-225ENST00000515824 UBA1P22314 1058 aaKnown RBP22.19■■□□□ 1.14
LMNA-225ENST00000515824 SP2Q02086 613 aa22.19■■□□□ 1.14
LMNA-225ENST00000515824 FAM126BQ8IXS8 530 aa22.19■■□□□ 1.14
LMNA-225ENST00000515824 CCDC148Q8NFR7 591 aa22.19■■□□□ 1.14
LMNA-225ENST00000515824 CDHR1Q96JP9 859 aa22.19■■□□□ 1.14
LMNA-225ENST00000515824 SPATA33Q96N06 139 aa22.19■■□□□ 1.14
LMNA-225ENST00000515824 MAFGO15525 162 aa22.18■■□□□ 1.14
LMNA-225ENST00000515824 PPFIA4O75335 1185 aa22.18■■□□□ 1.14
LMNA-225ENST00000515824 CDKL5O76039 1030 aa22.18■■□□□ 1.14
LMNA-225ENST00000515824 DEXIO95424 95 aa22.18■■□□□ 1.14
LMNA-225ENST00000515824 RAG1P15918 1043 aa22.18■■□□□ 1.14
LMNA-225ENST00000515824 SCRN1Q12765 414 aa22.18■■□□□ 1.14
LMNA-225ENST00000515824 MCTP2Q6DN12 878 aa22.18■■□□□ 1.14
LMNA-225ENST00000515824 GPRASP2Q96D09 838 aa22.18■■□□□ 1.14
LMNA-225ENST00000515824 SENP7Q9BQF6 1050 aa22.18■■□□□ 1.14
LMNA-225ENST00000515824 ANO3Q9BYT9 981 aa22.18■■□□□ 1.14
LMNA-225ENST00000515824 UBE2OQ9C0C9 1292 aaKnown RBP22.18■■□□□ 1.14
LMNA-225ENST00000515824 SH3GLB2Q9NR46 395 aa22.18■■□□□ 1.14
LMNA-225ENST00000515824 A0A1W2PPC1 479 aa22.17■■□□□ 1.14
LMNA-225ENST00000515824 SORBS3O60504 671 aa22.17■■□□□ 1.14
LMNA-225ENST00000515824 PFKFB2O60825 505 aa22.17■■□□□ 1.14
LMNA-225ENST00000515824 CLK2P49760 499 aaKnown RBP22.17■■□□□ 1.14
LMNA-225ENST00000515824 NBPF20Q3BBV1 942 aa22.17■■□□□ 1.14
LMNA-225ENST00000515824 GIMAP8Q8ND71 665 aaPredicted RBP22.17■■□□□ 1.14
LMNA-225ENST00000515824 BICD2Q8TD16 824 aa22.17■■□□□ 1.14
LMNA-225ENST00000515824 UBIAD1Q9Y5Z9 338 aa22.17■■□□□ 1.14
LMNA-225ENST00000515824 CD4P01730 458 aa22.16■■□□□ 1.14
LMNA-225ENST00000515824 SEMA3FQ13275 785 aa22.16■■□□□ 1.14
LMNA-225ENST00000515824 HSDL1Q3SXM5 330 aa22.16■■□□□ 1.14
LMNA-225ENST00000515824 JAKMIP3Q5VZ66 844 aa22.16■■□□□ 1.14
LMNA-225ENST00000515824 NFRKBQ6P4R8 1299 aa22.16■■□□□ 1.14
LMNA-225ENST00000515824 METTL7BQ6UX53 244 aa22.16■■□□□ 1.14
LMNA-225ENST00000515824 BADQ92934 168 aa22.16■■□□□ 1.14
LMNA-225ENST00000515824 PGBD1Q96JS3 809 aa22.16■■□□□ 1.14
LMNA-225ENST00000515824 JADE2Q9NQC1 790 aa22.16■■□□□ 1.14
LMNA-225ENST00000515824 TMEM260Q9NX78 707 aa22.16■■□□□ 1.14
LMNA-225ENST00000515824 VPS54Q9P1Q0 977 aa22.16■■□□□ 1.14
LMNA-225ENST00000515824 PCDH10Q9P2E7 1040 aa22.16■■□□□ 1.14
LMNA-225ENST00000515824 TBX21Q9UL17 535 aa22.16■■□□□ 1.14
LMNA-225ENST00000515824 NOP56O00567 594 aaKnown RBP22.15■■□□□ 1.14
LMNA-225ENST00000515824 SUPT20HL2P0C7V6 817 aa22.15■■□□□ 1.14
LMNA-225ENST00000515824 ITGB5P18084 799 aa22.15■■□□□ 1.14
LMNA-225ENST00000515824 SREBF1P36956 1147 aa22.15■■□□□ 1.14
LMNA-225ENST00000515824 CHMP4BP1P59074 171 aa22.15■■□□□ 1.14
LMNA-225ENST00000515824 PTPN11Q06124 597 aaPredicted RBP22.15■■□□□ 1.14
LMNA-225ENST00000515824 MTMR1Q13613 665 aa22.15■■□□□ 1.14
LMNA-225ENST00000515824 FAM47CQ5HY64 1035 aa22.15■■□□□ 1.14
LMNA-225ENST00000515824 CYFIP1Q7L576 1253 aa22.15■■□□□ 1.14
LMNA-225ENST00000515824 REXO1Q8N1G1 1221 aaKnown RBP22.15■■□□□ 1.14
LMNA-225ENST00000515824 MXRA8Q9BRK3 442 aa22.15■■□□□ 1.14
LMNA-225ENST00000515824 KATNAL1Q9BW62 490 aa22.15■■□□□ 1.14
LMNA-225ENST00000515824 B4GALT4O60513 344 aa22.14■■□□□ 1.13
LMNA-225ENST00000515824 TIMP1P01033 207 aa22.14■■□□□ 1.13
LMNA-225ENST00000515824 HOXD8P13378 290 aaPredicted RBP22.14■■□□□ 1.13
LMNA-225ENST00000515824 ITGB8P26012 769 aa22.14■■□□□ 1.13
LMNA-225ENST00000515824 ZNF76P36508 570 aa22.14■■□□□ 1.13
LMNA-225ENST00000515824 NLRP5P59047 1200 aa22.14■■□□□ 1.13
LMNA-225ENST00000515824 C22orf23Q9BZE7 217 aa22.14■■□□□ 1.13
LMNA-225ENST00000515824 TRPV6Q9H1D0 765 aa22.14■■□□□ 1.13
LMNA-225ENST00000515824 CEP55Q53EZ4 464 aa22.13■■□□□ 1.13
LMNA-225ENST00000515824 TDHQ8IZJ6 230 aa22.13■■□□□ 1.13
LMNA-225ENST00000515824 KAT2BQ92831 832 aa22.13■■□□□ 1.13
LMNA-225ENST00000515824 BCAS3Q9H6U6 928 aa22.13■■□□□ 1.13
LMNA-225ENST00000515824 RANBP2P49792 3224 aaKnown RBP22.13■■□□□ 1.13
LMNA-225ENST00000515824 ATP9AO75110 1047 aa22.12■■□□□ 1.13
LMNA-225ENST00000515824 ARHGAP4P98171 946 aa22.12■■□□□ 1.13
LMNA-225ENST00000515824 ME3Q16798 604 aa22.12■■□□□ 1.13
LMNA-225ENST00000515824 FAM177A1Q8N128 213 aaPredicted RBP22.12■■□□□ 1.13
LMNA-225ENST00000515824 UPF2Q9HAU5 1272 aaKnown RBP22.12■■□□□ 1.13
LMNA-225ENST00000515824 TRMT13Q9NUP7 481 aaKnown RBP22.12■■□□□ 1.13
LMNA-225ENST00000515824 F2P00734 622 aa22.11■■□□□ 1.13
LMNA-225ENST00000515824 ZNF286BP0CG31 522 aa22.11■■□□□ 1.13
LMNA-225ENST00000515824 KCNA2P16389 499 aa22.11■■□□□ 1.13
LMNA-225ENST00000515824 PSEN2P49810 448 aa22.11■■□□□ 1.13
LMNA-225ENST00000515824 MFSD10Q14728 455 aa22.11■■□□□ 1.13
LMNA-225ENST00000515824 MFSD5Q6N075 450 aa22.11■■□□□ 1.13
LMNA-225ENST00000515824 C7orf31Q8N865 590 aa22.11■■□□□ 1.13
LMNA-225ENST00000515824 ALG1Q9BT22 464 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms