RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 CPZQ66K79 652 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 LIMS2Q7Z4I7 341 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 FAM178BQ8IXR5 827 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 PPIL6Q8IXY8 311 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 ARRDC4Q8NCT1 418 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 SAMD11Q96NU1 681 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 SSBP3Q9BWW4 388 aaPredicted RBP6.43□□□□□ -1.38
LINC01088-211ENST00000515597 ACTR10Q9NZ32 417 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 ST6GALNAC2Q9UJ37 374 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 ZNF652Q9Y2D9 606 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 COA3Q9Y2R0 106 aaPredicted RBP6.43□□□□□ -1.38
LINC01088-211ENST00000515597 PCDHA2Q9Y5H9 948 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 SCG5P05408 212 aa6.42□□□□□ -1.38
LINC01088-211ENST00000515597 FGRP09769 529 aa6.42□□□□□ -1.38
LINC01088-211ENST00000515597 ZNF28P17035 718 aa6.42□□□□□ -1.38
LINC01088-211ENST00000515597 HOXC12P31275 282 aa6.42□□□□□ -1.38
LINC01088-211ENST00000515597 MRM1Q6IN84 353 aaKnown RBP6.42□□□□□ -1.38
LINC01088-211ENST00000515597 TTC9BQ8N6N2 239 aa6.42□□□□□ -1.38
LINC01088-211ENST00000515597 CHAMP1Q96JM3 812 aa6.42□□□□□ -1.38
LINC01088-211ENST00000515597 LCORQ96JN0 433 aaPredicted RBP6.42□□□□□ -1.38
LINC01088-211ENST00000515597 IGSF5Q9NSI5 407 aa6.42□□□□□ -1.38
LINC01088-211ENST00000515597 PCDHB4Q9Y5E5 795 aa6.42□□□□□ -1.38
LINC01088-211ENST00000515597 B4GALT3O60512 393 aa6.41□□□□□ -1.38
LINC01088-211ENST00000515597 LTBRP36941 435 aa6.41□□□□□ -1.38
LINC01088-211ENST00000515597 GTF2A2P52657 109 aa6.41□□□□□ -1.38
LINC01088-211ENST00000515597 ZXDAP98168 799 aa6.41□□□□□ -1.38
LINC01088-211ENST00000515597 DENND5AQ6IQ26 1287 aa6.41□□□□□ -1.38
LINC01088-211ENST00000515597 GLB1LQ6UWU2 654 aa6.41□□□□□ -1.38
LINC01088-211ENST00000515597 TMEM145Q8NBT3 493 aa6.41□□□□□ -1.38
LINC01088-211ENST00000515597 MICAL1Q8TDZ2 1067 aa6.41□□□□□ -1.38
LINC01088-211ENST00000515597 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.41□□□□□ -1.38
LINC01088-211ENST00000515597 NGRNQ9NPE2 291 aaKnown RBP6.41□□□□□ -1.38
LINC01088-211ENST00000515597 CLDND1Q9NY35 253 aa6.41□□□□□ -1.38
LINC01088-211ENST00000515597 DTLQ9NZJ0 730 aa6.41□□□□□ -1.38
LINC01088-211ENST00000515597 PRKAG3Q9UGI9 489 aa6.41□□□□□ -1.38
LINC01088-211ENST00000515597 TCRBV5S2A0A599 114 aa6.4□□□□□ -1.38
LINC01088-211ENST00000515597 HGSO14964 777 aaPredicted RBP6.4□□□□□ -1.38
LINC01088-211ENST00000515597 DDAH1O94760 285 aa6.4□□□□□ -1.38
LINC01088-211ENST00000515597 CYP1A1P04798 512 aaPredicted RBP6.4□□□□□ -1.38
LINC01088-211ENST00000515597 ETFBP38117 255 aa6.4□□□□□ -1.38
LINC01088-211ENST00000515597 RBM25P49756 843 aaKnown RBP6.4□□□□□ -1.38
LINC01088-211ENST00000515597 GFRA1P56159 465 aa6.4□□□□□ -1.38
LINC01088-211ENST00000515597 ACBD5Q5T8D3 534 aaPredicted RBP6.4□□□□□ -1.38
LINC01088-211ENST00000515597 STEAP3Q658P3 488 aa6.4□□□□□ -1.38
LINC01088-211ENST00000515597 TEPPQ6URK8 271 aa6.4□□□□□ -1.38
LINC01088-211ENST00000515597 CHST13Q8NET6 341 aa6.4□□□□□ -1.38
LINC01088-211ENST00000515597 TOE1Q96GM8 510 aaKnown RBP6.4□□□□□ -1.38
LINC01088-211ENST00000515597 C1QTNF3Q9BXJ4 246 aa6.4□□□□□ -1.38
LINC01088-211ENST00000515597 CROTQ9UKG9 612 aa6.4□□□□□ -1.38
LINC01088-211ENST00000515597 H7BY64 318 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 LAMTOR5O43504 91 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 AKAP8O43823 692 aaKnown RBP6.39□□□□□ -1.39
LINC01088-211ENST00000515597 CPP00450 1065 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 MLLT6P55198 1093 aaPredicted RBP6.39□□□□□ -1.39
LINC01088-211ENST00000515597 ARID5AQ03989 594 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 LSAMPQ13449 338 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 CHRNA2Q15822 529 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 MCF2L2Q86YR7 1114 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 SLC43A3Q8NBI5 491 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 MBD6Q96DN6 1003 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 C1orf159Q96HA4 380 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 L2HGDHQ9H9P8 463 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 PPP4R1LQ9P1A2 415 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 RBPJLQ9UBG7 517 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 WASF3Q9UPY6 502 aa6.39□□□□□ -1.39
LINC01088-211ENST00000515597 C9orf118A6NHY6 69 aa6.38□□□□□ -1.39
LINC01088-211ENST00000515597 C1QTNF3-AMACRE9PGA6 284 aa6.38□□□□□ -1.39
LINC01088-211ENST00000515597 TADA3O75528 432 aa6.38□□□□□ -1.39
LINC01088-211ENST00000515597 IL13P35225 146 aa6.38□□□□□ -1.39
LINC01088-211ENST00000515597 TESK1Q15569 626 aa6.38□□□□□ -1.39
LINC01088-211ENST00000515597 EMC4Q5J8M3 183 aa6.38□□□□□ -1.39
LINC01088-211ENST00000515597 TMC5Q6UXY8 1006 aa6.38□□□□□ -1.39
LINC01088-211ENST00000515597 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.38□□□□□ -1.39
LINC01088-211ENST00000515597 ZCCHC14Q8WYQ9 949 aaKnown RBP6.38□□□□□ -1.39
LINC01088-211ENST00000515597 DVL3Q92997 716 aaPredicted RBP6.38□□□□□ -1.39
LINC01088-211ENST00000515597 YTHDC1Q96MU7 727 aaKnown RBP6.38□□□□□ -1.39
LINC01088-211ENST00000515597 CLIC6Q96NY7 704 aa6.38□□□□□ -1.39
LINC01088-211ENST00000515597 GMLQ99445 158 aa6.38□□□□□ -1.39
LINC01088-211ENST00000515597 ZNF408Q9H9D4 720 aa6.38□□□□□ -1.39
LINC01088-211ENST00000515597 MYOTQ9UBF9 498 aa6.38□□□□□ -1.39
LINC01088-211ENST00000515597 LRG1P02750 347 aa6.37□□□□□ -1.39
LINC01088-211ENST00000515597 GRIA2P42262 883 aa6.37□□□□□ -1.39
LINC01088-211ENST00000515597 ICAM4Q14773 271 aa6.37□□□□□ -1.39
LINC01088-211ENST00000515597 IGDCC4Q8TDY8 1250 aa6.37□□□□□ -1.39
LINC01088-211ENST00000515597 TMEM168Q9H0V1 697 aa6.37□□□□□ -1.39
LINC01088-211ENST00000515597 EPB41L1Q9H4G0 881 aa6.37□□□□□ -1.39
LINC01088-211ENST00000515597 DGKIO75912 1065 aa6.36□□□□□ -1.39
LINC01088-211ENST00000515597 DNAJA1P31689 397 aaKnown RBP6.36□□□□□ -1.39
LINC01088-211ENST00000515597 FXNQ16595 210 aa6.36□□□□□ -1.39
LINC01088-211ENST00000515597 SLC35F1Q5T1Q4 408 aa6.36□□□□□ -1.39
LINC01088-211ENST00000515597 PHF19Q5T6S3 580 aa6.36□□□□□ -1.39
LINC01088-211ENST00000515597 SPRED1Q7Z699 444 aa6.36□□□□□ -1.39
LINC01088-211ENST00000515597 PLEKHH3Q7Z736 793 aa6.36□□□□□ -1.39
LINC01088-211ENST00000515597 CCDC140Q96MF4 163 aa6.36□□□□□ -1.39
LINC01088-211ENST00000515597 KRTAP17-1Q9BYP8 105 aa6.36□□□□□ -1.39
LINC01088-211ENST00000515597 PPARGC1AQ9UBK2 798 aaKnown RBP6.36□□□□□ -1.39
LINC01088-211ENST00000515597 GJB6O95452 261 aa6.35□□□□□ -1.39
LINC01088-211ENST00000515597 FSHBP01225 129 aa6.35□□□□□ -1.39
LINC01088-211ENST00000515597 CDSNQ15517 529 aa6.35□□□□□ -1.39
LINC01088-211ENST00000515597 SURF1Q15526 300 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms