RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 DHX37Q8IY37 1157 aaKnown RBP17.05■□□□□ 0.32
HMGCLL1-209ENST00000515546 ZFP91Q96JP5 570 aaPredicted RBP17.05■□□□□ 0.32
HMGCLL1-209ENST00000515546 HIPK3Q9H422 1215 aa17.05■□□□□ 0.32
HMGCLL1-209ENST00000515546 TRMT13Q9NUP7 481 aaKnown RBP17.05■□□□□ 0.32
HMGCLL1-209ENST00000515546 SPATA31C2B4DYI2 1134 aa17.04■□□□□ 0.32
HMGCLL1-209ENST00000515546 STXBP3O00186 592 aa17.04■□□□□ 0.32
HMGCLL1-209ENST00000515546 FIBPO43427 364 aa17.04■□□□□ 0.32
HMGCLL1-209ENST00000515546 GGPS1O95749 300 aa17.04■□□□□ 0.32
HMGCLL1-209ENST00000515546 ADD1P35611 737 aaKnown RBP17.04■□□□□ 0.32
HMGCLL1-209ENST00000515546 RUFY3Q7L099 469 aa17.04■□□□□ 0.32
HMGCLL1-209ENST00000515546 PPP1R12CQ9BZL4 782 aa17.04■□□□□ 0.32
HMGCLL1-209ENST00000515546 BARHL2Q9NY43 387 aa17.04■□□□□ 0.32
HMGCLL1-209ENST00000515546 V9GY48 417 aaPredicted RBP17.04■□□□□ 0.32
HMGCLL1-209ENST00000515546 UMODL1Q5DID0 1318 aa17.03■□□□□ 0.32
HMGCLL1-209ENST00000515546 SUPT20HL2P0C7V6 817 aa17.03■□□□□ 0.32
HMGCLL1-209ENST00000515546 CSF2RAP15509 400 aa17.03■□□□□ 0.32
HMGCLL1-209ENST00000515546 CYP2C18P33260 490 aa17.03■□□□□ 0.32
HMGCLL1-209ENST00000515546 NAPAP54920 295 aa17.03■□□□□ 0.32
HMGCLL1-209ENST00000515546 PPIGQ13427 754 aaKnown RBP eCLIP17.03■□□□□ 0.32
HMGCLL1-209ENST00000515546 TOB2Q14106 344 aaPredicted RBP17.03■□□□□ 0.32
HMGCLL1-209ENST00000515546 HSDL1Q3SXM5 330 aa17.03■□□□□ 0.32
HMGCLL1-209ENST00000515546 TMEM199Q8N511 208 aa17.03■□□□□ 0.32
HMGCLL1-209ENST00000515546 WNT8AQ9H1J5 351 aa17.03■□□□□ 0.32
HMGCLL1-209ENST00000515546 RIC8AQ9NPQ8 531 aa17.03■□□□□ 0.32
HMGCLL1-209ENST00000515546 SPDYE3A6NKU9 549 aa17.02■□□□□ 0.32
HMGCLL1-209ENST00000515546 HAS3O00219 553 aa17.02■□□□□ 0.32
HMGCLL1-209ENST00000515546 PPFIA4O75335 1185 aa17.02■□□□□ 0.32
HMGCLL1-209ENST00000515546 ZNF286BP0CG31 522 aa17.02■□□□□ 0.32
HMGCLL1-209ENST00000515546 ADCY7P51828 1080 aa17.02■□□□□ 0.32
HMGCLL1-209ENST00000515546 PFKFB3Q16875 520 aaPredicted RBP17.02■□□□□ 0.32
HMGCLL1-209ENST00000515546 METTL7BQ6UX53 244 aa17.02■□□□□ 0.32
HMGCLL1-209ENST00000515546 C16orf59Q7L2K0 433 aa17.02■□□□□ 0.32
HMGCLL1-209ENST00000515546 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
HMGCLL1-209ENST00000515546 CTAGE1Q96RT6 745 aa17.02■□□□□ 0.32
HMGCLL1-209ENST00000515546 NAP1L2Q9ULW6 460 aaPredicted RBP17.02■□□□□ 0.32
HMGCLL1-209ENST00000515546 CYP46A1Q9Y6A2 500 aa17.02■□□□□ 0.32
HMGCLL1-209ENST00000515546 TANC1Q9C0D5 1861 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 CYP2C9P11712 490 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 SCG2P13521 617 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 ITGB5P18084 799 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 PDIA3P30101 505 aaKnown RBP17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 CLK2P49760 499 aaKnown RBP17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 NEDD9Q14511 834 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 NTRK3Q16288 839 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 FAM47CQ5HY64 1035 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 RASIP1Q5U651 963 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 PPP1R13LQ8WUF5 828 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 GPRASP2Q96D09 838 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 IL17RAQ96F46 866 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 RNPC3Q96LT9 517 aaKnown RBP17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 SENP7Q9BQF6 1050 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 KATNAL1Q9BW62 490 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 GLT8D2Q9H1C3 349 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 BCAS3Q9H6U6 928 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 RTEL1Q9NZ71 1219 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 PCDHA6Q9UN73 950 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 PCDHA8Q9Y5H6 950 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 UBIAD1Q9Y5Z9 338 aa17.01■□□□□ 0.31
HMGCLL1-209ENST00000515546 ESYT2A0FGR8 921 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 PITPNM1O00562 1244 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 PRPF3O43395 683 aaKnown RBP17■□□□□ 0.31
HMGCLL1-209ENST00000515546 IFNAR1P17181 557 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 PSEN2P49810 448 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 MFSD10Q14728 455 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 PKN1Q16512 942 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 TMEM240Q5SV17 173 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 PSRC1Q6PGN9 363 aaPredicted RBP17■□□□□ 0.31
HMGCLL1-209ENST00000515546 NLRX1Q86UT6 975 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 VWCEQ96DN2 955 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 CDHR1Q96JP9 859 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 C16orf70Q9BSU1 422 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 UPF3BQ9BZI7 483 aaKnown RBP17■□□□□ 0.31
HMGCLL1-209ENST00000515546 EHMT1Q9H9B1 1298 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 MLXIPQ9HAP2 919 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 IL23AQ9NPF7 189 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 GTF2IRD1Q9UHL9 959 aa17■□□□□ 0.31
HMGCLL1-209ENST00000515546 SORBS3O60504 671 aa16.99■□□□□ 0.31
HMGCLL1-209ENST00000515546 FOSP01100 380 aaPredicted RBP16.99■□□□□ 0.31
HMGCLL1-209ENST00000515546 KCNA2P16389 499 aa16.99■□□□□ 0.31
HMGCLL1-209ENST00000515546 ANAPC15P60006 121 aa16.99■□□□□ 0.31
HMGCLL1-209ENST00000515546 SMAD3P84022 425 aaKnown RBP16.99■□□□□ 0.31
HMGCLL1-209ENST00000515546 AP3B2Q13367 1082 aa16.99■□□□□ 0.31
HMGCLL1-209ENST00000515546 FAM109BQ6ICB4 259 aaPredicted RBP16.99■□□□□ 0.31
HMGCLL1-209ENST00000515546 GDF6Q6KF10 455 aaPredicted RBP16.99■□□□□ 0.31
HMGCLL1-209ENST00000515546 GPR20Q99678 358 aa16.99■□□□□ 0.31
HMGCLL1-209ENST00000515546 RNF26Q9BY78 433 aaPredicted RBP16.99■□□□□ 0.31
HMGCLL1-209ENST00000515546 SMCO2A6NFE2 343 aa16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 LGALS2P05162 132 aa16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 HOXC8P31273 242 aa16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 SREBF1P36956 1147 aa16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 CCL23P55773 120 aa16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 RBL2Q08999 1139 aa16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 KIAA0753Q2KHM9 967 aa16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 CYFIP1Q7L576 1253 aa16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 GIMAP8Q8ND71 665 aaPredicted RBP16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 PHKBQ93100 1093 aa16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 ZNF274Q96GC6 653 aaPredicted RBP16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 ANO3Q9BYT9 981 aa16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 ZMYND12Q9H0C1 365 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms