RNA–Protein interactions for RNA: ENST00000515395.5

SSBP2-219, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-219ENST00000515395 ATN1P54259 1190 aaPredicted RBP11.67□□□□□ -0.54
SSBP2-219ENST00000515395 NKX3-2P78367 333 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 TRIM29Q14134 588 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 GALNT17Q6IS24 598 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 NSUN7Q8NE18 718 aaKnown RBP11.67□□□□□ -0.54
SSBP2-219ENST00000515395 COPS5Q92905 334 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 CDHR1Q96JP9 859 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 INPP4AQ96PE3 977 aaPredicted RBP11.67□□□□□ -0.54
SSBP2-219ENST00000515395 STARD7Q9NQZ5 370 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 POLR3EQ9NVU0 708 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 DDX41Q9UJV9 622 aaKnown RBP11.67□□□□□ -0.54
SSBP2-219ENST00000515395 PCDHA4Q9UN74 947 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 NR2E3Q9Y5X4 410 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 DNAH12Q6ZR08 3092 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 KPNA6O60684 536 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 CABYRO75952 493 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 RGS20O76081 388 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 PTGS1P23219 599 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 ICAM3P32942 547 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 SREBF1P36956 1147 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 IRX5P78411 483 aaPredicted RBP11.67□□□□□ -0.54
SSBP2-219ENST00000515395 MTMR1Q13613 665 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 LAMC2Q13753 1193 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 NEDD9Q14511 834 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 CCSAPQ6IQ19 270 aaPredicted RBP11.67□□□□□ -0.54
SSBP2-219ENST00000515395 SLC39A5Q6ZMH5 540 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 BLIDQ8IZY5 108 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 GIMAP8Q8ND71 665 aaPredicted RBP11.67□□□□□ -0.54
SSBP2-219ENST00000515395 GPRASP2Q96D09 838 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 AIFM3Q96NN9 605 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 LLPHQ9BRT6 129 aaKnown RBP11.67□□□□□ -0.54
SSBP2-219ENST00000515395 ALG1Q9BT22 464 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 MLXIPQ9HAP2 919 aa11.67□□□□□ -0.54
SSBP2-219ENST00000515395 ELP1O95163 1332 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 MKI67P46013 3256 aaKnown RBP11.66□□□□□ -0.54
SSBP2-219ENST00000515395 A6NJR5 290 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 SPATA31C2B4DYI2 1134 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 CTAGE5O15320 804 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 MAFGO15525 162 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 DTNBO60941 627 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 GGPS1O95749 300 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 MYL3P08590 195 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 FXR2P51116 673 aaKnown RBP eCLIP11.66□□□□□ -0.54
SSBP2-219ENST00000515395 ARHGAP4P98171 946 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 ARHGAP1Q07960 439 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 LRRC26Q2I0M4 334 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 CELF3Q5SZQ8 465 aaKnown RBP11.66□□□□□ -0.54
SSBP2-219ENST00000515395 CXCL17Q6UXB2 119 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 C7orf61Q8IZ16 206 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 EMID1Q96A84 441 aaPredicted RBP11.66□□□□□ -0.54
SSBP2-219ENST00000515395 PHF20Q9BVI0 1012 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 BRMS1Q9HCU9 246 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 KCNJ14Q9UNX9 436 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 ATP11BQ9Y2G3 1177 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 UBIAD1Q9Y5Z9 338 aa11.66□□□□□ -0.54
SSBP2-219ENST00000515395 KAT6AQ92794 2004 aa11.65□□□□□ -0.54
SSBP2-219ENST00000515395 A0A0U1RQG5 324 aaPredicted RBP11.65□□□□□ -0.55
SSBP2-219ENST00000515395 NOP56O00567 594 aaKnown RBP11.65□□□□□ -0.55
SSBP2-219ENST00000515395 SORBS3O60504 671 aa11.65□□□□□ -0.55
SSBP2-219ENST00000515395 JAK2O60674 1132 aa11.65□□□□□ -0.55
SSBP2-219ENST00000515395 FDPSP14324 419 aaKnown RBP11.65□□□□□ -0.55
SSBP2-219ENST00000515395 UBA1P22314 1058 aaKnown RBP11.65□□□□□ -0.55
SSBP2-219ENST00000515395 RTP1P59025 263 aa11.65□□□□□ -0.55
SSBP2-219ENST00000515395 HMGN5P82970 282 aaKnown RBP11.65□□□□□ -0.55
SSBP2-219ENST00000515395 DGKDQ16760 1214 aa11.65□□□□□ -0.55
SSBP2-219ENST00000515395 MYSM1Q5VVJ2 828 aa11.65□□□□□ -0.55
SSBP2-219ENST00000515395 FAM184AQ8NB25 1140 aa11.65□□□□□ -0.55
SSBP2-219ENST00000515395 DAGLBQ8NCG7 672 aa11.65□□□□□ -0.55
SSBP2-219ENST00000515395 PPTC7Q8NI37 304 aa11.65□□□□□ -0.55
SSBP2-219ENST00000515395 RASGRP4Q8TDF6 673 aa11.65□□□□□ -0.55
SSBP2-219ENST00000515395 AFG1LQ8WV93 481 aa11.65□□□□□ -0.55
SSBP2-219ENST00000515395 SPATA33Q96N06 139 aa11.65□□□□□ -0.55
SSBP2-219ENST00000515395 MXRA8Q9BRK3 442 aa11.65□□□□□ -0.55
SSBP2-219ENST00000515395 JADE2Q9NQC1 790 aa11.65□□□□□ -0.55
SSBP2-219ENST00000515395 MROH7Q68CQ1 1323 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 CCDC194A0A1B0GVG4 234 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 MMP3P08254 477 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 CYP3A4P08684 503 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 ITGB5P18084 799 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 FOSBP53539 338 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 PURAQ00577 322 aaKnown RBP11.64□□□□□ -0.55
SSBP2-219ENST00000515395 SP2Q02086 613 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 ST3GAL1Q11201 340 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 NONOQ15233 471 aaKnown RBP eCLIP11.64□□□□□ -0.556e-7■■■■□ 25.1
SSBP2-219ENST00000515395 CEP55Q53EZ4 464 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 C1orf53Q5VUE5 145 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 CYFIP1Q7L576 1253 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 KRT25Q7Z3Z0 450 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 SENP7Q9BQF6 1050 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 MTG1Q9BT17 334 aaPredicted RBP11.64□□□□□ -0.55
SSBP2-219ENST00000515395 SEZ6LQ9BYH1 1024 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 PRKAG2Q9UGJ0 569 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 KIF3AQ9Y496 699 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 SCN10AQ9Y5Y9 1956 aa11.64□□□□□ -0.55
SSBP2-219ENST00000515395 DCDC2CA8MYV0 355 aa11.63□□□□□ -0.55
SSBP2-219ENST00000515395 ARVCFO00192 962 aa11.63□□□□□ -0.55
SSBP2-219ENST00000515395 ADAMTS3O15072 1205 aa11.63□□□□□ -0.55
SSBP2-219ENST00000515395 TLR3O15455 904 aaKnown RBP11.63□□□□□ -0.55
SSBP2-219ENST00000515395 PQBP1O60828 265 aaKnown RBP11.63□□□□□ -0.55
SSBP2-219ENST00000515395 KRT2P35908 639 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms