RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 TRIM22Q8IYM9 498 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 CCDC24Q8N4L8 307 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 UBAC1Q9BSL1 405 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 PHF20Q9BVI0 1012 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 KCNH3Q9ULD8 1083 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 BAZ2BQ9UIF8 2168 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 MSL3P1P0C860 447 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 ATP1A3P13637 1013 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 ZFXP17010 805 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 PRDX5P30044 214 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 PIP4K2BP78356 416 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 RILPL1Q5EBL4 403 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 KANK3Q6NY19 840 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 TNFRSF25Q93038 417 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 MPHOSPH6Q99547 160 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 CCDC68Q9H2F9 335 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 DCP1AQ9NPI6 582 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 KCND1Q9NSA2 647 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 TFCP2L1Q9NZI6 479 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 C6orf203Q9P0P8 240 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 TUBGCP4Q9UGJ1 667 aa8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 PAIP2BQ9ULR5 123 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-219ENST00000514743 CNTNAP5Q8WYK1 1306 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 EBAG9O00559 213 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 INHBCP55103 352 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 FKBP15Q5T1M5 1219 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 ARMCX5Q6P1M9 558 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 NYXQ9GZU5 481 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 IFNKQ9P0W0 207 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 GNPATO15228 680 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 NEMFO60524 1076 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 NMT2O60551 498 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 KIF11P52732 1056 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 BTG3Q14201 252 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 PPP2R5BQ15173 497 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 CLPPQ16740 277 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 NT5DC1Q5TFE4 455 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 MIS18BP1Q6P0N0 1132 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 FNBP4Q8N3X1 1017 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 DCLK2Q8N568 766 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 ANKK1Q8NFD2 765 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 C8orf37Q96NL8 207 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 TCHPQ9BT92 498 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 VPS54Q9P1Q0 977 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 SSUH2Q9Y2M2 353 aa8.23□□□□□ -1.09
PDLIM5-219ENST00000514743 USP17L12C9JPN9 530 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 USP17L21D6R901 530 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 PRPF3O43395 683 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 ORC4O43929 436 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 PCP11498 1178 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 SARSP49591 514 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 COBLL1Q53SF7 1204 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 HSP90AA4PQ58FG1 418 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 CCSAPQ6IQ19 270 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 USP49Q70CQ1 688 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 CNNM3Q8NE01 707 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 SREK1Q8WXA9 508 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 DPF2Q92785 391 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 NLRP3Q96P20 1036 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 SETDB2Q96T68 719 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 MAK16Q9BXY0 300 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 RPAP3Q9H6T3 665 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 ARFGAP3Q9NP61 516 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 KLC4Q9NSK0 619 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 IMPACTQ9P2X3 320 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 PCDHA5Q9Y5H7 936 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 BZW2Q9Y6E2 419 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 A0A087X0B3 334 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 LINC00854A0A1B0GVQ3 168 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 hCG_1642624A0A1W2PR95 340 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 GOLGA6L9A6NEM1 432 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 ACTN4O43707 911 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 CYP2D6P10635 497 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 FUT4P22083 530 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 YY1P25490 414 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 HIBADHP31937 336 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 NEK2P51955 445 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 FAM182BQ5T319 152 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 IFIT1BQ5T764 474 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 CCDC121Q6ZUS5 278 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 ZNF579Q8NAF0 562 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 TRIM58Q8NG06 486 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 HOXC10Q9NYD6 342 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 SRPRBQ9Y5M8 271 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 TMEM221A6NGB7 291 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 ADAMTS3O15072 1205 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 LMOD1P29536 600 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 ARPC4P59998 168 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 PPP4CP60510 307 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 SAFBQ15424 915 aaKnown RBP eCLIP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 TMTC3Q6ZXV5 915 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 ZMAT2Q96NC0 199 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 MED15Q96RN5 788 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 CABP5Q9NP86 173 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 MYO1AQ9UBC5 1043 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 SSX2IPQ9Y2D8 614 aa8.22□□□□□ -1.09
PDLIM5-219ENST00000514743 P4HA2O15460 535 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 SMIM24O75264 130 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 DDAH1O94760 285 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms