RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 WDR59Q6PJI9 974 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 TACC3Q9Y6A5 838 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 HNRNPH1P31943 449 aaKnown RBP15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 FKBP3Q00688 224 aaKnown RBP15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 PAXIP1Q6ZW49 1069 aaPredicted RBP15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 NARFQ9UHQ1 456 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 H0YIN7 160 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 CCDC172P0C7W6 258 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 GSTO1P78417 241 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 PPP1R7Q15435 360 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 TTI2Q6NXR4 508 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 OR2W6PQ8NHA6 318 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 CTNNBL1Q8WYA6 563 aaPredicted RBP15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 NUCKS1Q9H1E3 243 aaKnown RBP15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 PCDHB13Q9Y5F0 798 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 RIMBP2O15034 1052 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 TBC1D31Q96DN5 1066 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 FAM205AQ6ZU69 1335 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 DCAF8L1A6NGE4 600 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 LAD1O00515 517 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 RPSAP08865 295 aaKnown RBP15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 ERFEQ4G0M1 354 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 GPBP1Q86WP2 473 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 SPATS2Q86XZ4 545 aaKnown RBP15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 LRRC47Q8N1G4 583 aaKnown RBP15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 RNPC3Q96LT9 517 aaKnown RBP15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 GOLPH3Q9H4A6 298 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 SAMD15Q9P1V8 674 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 PCDHA6Q9UN73 950 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 ATP8A1Q9Y2Q0 1164 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 PCDHA8Q9Y5H6 950 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 COL4A3BPQ9Y5P4 624 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 GSTTP1A0A1W2PQM5 241 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 SERPINB2P05120 415 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 CLNS1AP54105 237 aaKnown RBP15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 SLC27A3Q5K4L6 730 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 GKAP1Q5VSY0 366 aaPredicted RBP15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 MAGEF1Q9HAY2 307 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 TMOD2Q9NZR1 351 aa15.24■□□□□ 0.03
TSPAN17-208ENST00000514705 FLOT1O75955 427 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 UFL1O94874 794 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 PLS1Q14651 629 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 FAM83BQ5T0W9 1011 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 DDX12PQ92771 950 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 TMEM260Q9NX78 707 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 PCDHA12Q9UN75 941 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 SETD1AO15047 1707 aaKnown RBP15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 LSP1P33241 339 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 KCTD19Q17RG1 926 aaPredicted RBP15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 GALNT17Q6IS24 598 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 NLRP14Q86W24 1093 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 MMGT1Q8N4V1 131 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 MTRQ99707 1265 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 DDX47Q9H0S4 455 aaKnown RBP15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 WTIPA6NIX2 430 aaPredicted RBP15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 MEFVO15553 781 aaPredicted RBP15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 PPP1R37O75864 691 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 SSR1P43307 286 aaKnown RBP15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 IFNAR2P48551 515 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 AARSP49588 968 aaKnown RBP eCLIP15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 DHX9Q08211 1270 aaKnown RBP15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 ARHGEF1Q92888 912 aaKnown RBP15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 ARHGAP20Q9P2F6 1191 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 KIAA1024Q9UPX6 916 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 SERPING1P05155 500 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 ITPK1Q13572 414 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 VGLL2Q8N8G2 317 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 MGARPQ8TDB4 240 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 PAIP2Q9BPZ3 127 aaKnown RBP15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 CCSER1Q9C0I3 900 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 KCNK9Q9NPC2 374 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 TCEAL9Q9UHQ7 104 aa15.23■□□□□ 0.03
TSPAN17-208ENST00000514705 NFAT5O94916 1531 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 FGFR2P21802 821 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 DDX42Q86XP3 938 aaKnown RBP eCLIP15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 TSEN2Q8NCE0 465 aaKnown RBP15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 CCT8L2Q96SF2 557 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 NCAPGQ9BPX3 1015 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 SLIT3O75094 1523 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 CLTAP09496 248 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 LLGL1Q15334 1064 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 IL17AQ16552 155 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 WHAMMQ8TF30 809 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.22■□□□□ 0.036e-9■■■■■ 134.6
TSPAN17-208ENST00000514705 ARMCX3Q9UH62 379 aaPredicted RBP15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 KIF4AO95239 1232 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 EVX2Q03828 476 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 IRF2BP1Q8IU81 584 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 SYCP3Q8IZU3 236 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 LZTS2Q9BRK4 669 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 TAOK3Q9H2K8 898 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 GGA1Q9UJY5 639 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 PLAGL2Q9UPG8 496 aa15.22■□□□□ 0.03
TSPAN17-208ENST00000514705 ATP6V1G3Q96LB4 118 aa15.21■□□□□ 0.03
TSPAN17-208ENST00000514705 TMEM47Q9BQJ4 181 aa15.21■□□□□ 0.03
TSPAN17-208ENST00000514705 RNF14Q9UBS8 474 aa15.21■□□□□ 0.03
TSPAN17-208ENST00000514705 H2AFZP0C0S5 128 aa15.21■□□□□ 0.03
TSPAN17-208ENST00000514705 NR2F2P24468 414 aa15.21■□□□□ 0.03
TSPAN17-208ENST00000514705 PDE6BP35913 854 aa15.21■□□□□ 0.03
TSPAN17-208ENST00000514705 MRPL12P52815 198 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms