RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 CTHP32929 405 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 LMAN1P49257 510 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 NUBP1P53384 320 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 C8orf34Q49A92 452 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 RILPL1Q5EBL4 403 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 HYIQ5T013 277 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 TTLL7Q6ZT98 887 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 ZER1Q7Z7L7 766 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 LUZP1Q86V48 1076 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 NLRP14Q86W24 1093 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 MCF2L2Q86YR7 1114 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 MAB21L3Q8N8X9 362 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 TTC25Q96NG3 672 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 STK32BQ9NY57 414 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 HECAQ9UBI9 543 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-208ENST00000514335 ROCK2O75116 1388 aaKnown RBP7.95□□□□□ -1.14
NIPBL-208ENST00000514335 AFF2P51816 1311 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 NAIPQ13075 1403 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 CHD4Q14839 1912 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 GOLGA6L7A0A1B0GV03 622 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 HTR3EA5X5Y0 456 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 PRPF3O43395 683 aaKnown RBP7.95□□□□□ -1.14
NIPBL-208ENST00000514335 SCGB1D2O95969 90 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 CYP17A1P05093 508 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 POU3F3P20264 500 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-208ENST00000514335 RAC1P63000 192 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 IKQ13123 557 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-208ENST00000514335 MSLNQ13421 630 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-208ENST00000514335 TTLL12Q14166 644 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-208ENST00000514335 MAP7Q14244 749 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 ASIC2Q16515 512 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 WSCD2Q2TBF2 565 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 TLDC1Q6P9B6 456 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 CCDC110Q8TBZ0 833 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 MDM1Q8TC05 714 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 CACTINQ8WUQ7 758 aaKnown RBP7.95□□□□□ -1.14
NIPBL-208ENST00000514335 TRIM8Q9BZR9 551 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 OSBPL3Q9H4L5 887 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 MTUS1Q9ULD2 1270 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 SLIT3O75094 1523 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 TARSL2A2RTX5 802 aaKnown RBP7.95□□□□□ -1.14
NIPBL-208ENST00000514335 STMND1H3BQB6 276 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 TSPAN6O43657 245 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 KRT13P13646 458 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 VAMP1P23763 118 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 MLH1P40692 756 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 SERPINB4P48594 390 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 PDE6CP51160 858 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 GJA9P57773 515 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 C21orf58P58505 322 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 AKAP17AQ02040 695 aaKnown RBP7.95□□□□□ -1.14
NIPBL-208ENST00000514335 SEMA3AQ14563 771 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 ANKRD1Q15327 319 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 SAFBQ15424 915 aaKnown RBP eCLIP7.95□□□□□ -1.14
NIPBL-208ENST00000514335 CAVIN4Q5BKX8 364 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 DALRD3Q5D0E6 543 aaKnown RBP7.95□□□□□ -1.14
NIPBL-208ENST00000514335 TRIM68Q6AZZ1 485 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 TATDN1Q6P1N9 297 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 STRA8Q7Z7C7 330 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 METTL3Q86U44 580 aaKnown RBP7.95□□□□□ -1.14
NIPBL-208ENST00000514335 IFNL3Q8IZI9 196 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 TEX9Q8N6V9 391 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 HERVK_113Q902F9 699 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 CNKSR1Q969H4 720 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 DTNBP1Q96EV8 351 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 UBN1Q9NPG3 1134 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 ATPIF1Q9UII2 106 aa7.95□□□□□ -1.14
NIPBL-208ENST00000514335 ARHGEF28Q8N1W1 1705 aaKnown RBP7.95□□□□□ -1.14
NIPBL-208ENST00000514335 SBF2Q86WG5 1849 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 TMEM232C9JQI7 657 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 ABLIM1O14639 778 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 POTEJP0CG39 1038 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 MUTP22033 750 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 CETN2P41208 172 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 HSP90AA5PQ58FG0 334 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 IL31Q6EBC2 164 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 SHQ1Q6PI26 577 aaKnown RBP7.94□□□□□ -1.14
NIPBL-208ENST00000514335 BCL7CQ8WUZ0 217 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-208ENST00000514335 GMLQ99445 158 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 SELENOOQ9BVL4 669 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 OSBPL2Q9H1P3 480 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 XAB2Q9HCS7 855 aaKnown RBP7.94□□□□□ -1.14
NIPBL-208ENST00000514335 hCG_1642624A0A1W2PR95 340 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 SPDYE5A6NIY4 337 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 RASSF10A6NK89 507 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 ZBED4O75132 1171 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 GNAT1P11488 350 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 PPM1FP49593 454 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-208ENST00000514335 LIG3P49916 1009 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 MDM2Q00987 491 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-208ENST00000514335 DR1Q01658 176 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 IDI1Q13907 227 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 C21orf62-AS1Q17RA5 79 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 SWSAP1Q6NVH7 229 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 MIS18BP1Q6P0N0 1132 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.94□□□□□ -1.14
NIPBL-208ENST00000514335 CCDC116Q8IYX3 515 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 CCDC148Q8NFR7 591 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 UPF3BQ9BZI7 483 aaKnown RBP7.94□□□□□ -1.14
NIPBL-208ENST00000514335 ZWILCHQ9H900 591 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms