RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 EMID1Q96A84 441 aaPredicted RBP23.77■■□□□ 1.4
SQSTM1-215ENST00000514093 PCDHB15Q9Y5E8 787 aa23.77■■□□□ 1.4
SQSTM1-215ENST00000514093 RSPH10B2B2RC85 870 aa23.76■■□□□ 1.39
SQSTM1-215ENST00000514093 EIF3JO75822 258 aaKnown RBP23.76■■□□□ 1.39
SQSTM1-215ENST00000514093 UPP2O95045 317 aa23.76■■□□□ 1.39
SQSTM1-215ENST00000514093 RSPH10BP0C881 870 aa23.76■■□□□ 1.39
SQSTM1-215ENST00000514093 NHLH1Q02575 133 aa23.76■■□□□ 1.39
SQSTM1-215ENST00000514093 MCMDC2Q4G0Z9 681 aa23.76■■□□□ 1.39
SQSTM1-215ENST00000514093 TBC1D10CQ8IV04 446 aa23.76■■□□□ 1.39
SQSTM1-215ENST00000514093 ANKS1AQ92625 1134 aa23.76■■□□□ 1.39
SQSTM1-215ENST00000514093 EVI5LQ96CN4 794 aa23.76■■□□□ 1.39
SQSTM1-215ENST00000514093 FBXL18Q96ME1 805 aa23.76■■□□□ 1.39
SQSTM1-215ENST00000514093 VAT1LQ9HCJ6 419 aa23.76■■□□□ 1.39
SQSTM1-215ENST00000514093 POTEB3A0JP26 581 aa23.75■■□□□ 1.39
SQSTM1-215ENST00000514093 NR3C2P08235 984 aa23.75■■□□□ 1.39
SQSTM1-215ENST00000514093 POTEBQ6S5H4 581 aa23.75■■□□□ 1.39
SQSTM1-215ENST00000514093 ZNF589Q86UQ0 364 aaPredicted RBP23.75■■□□□ 1.39
SQSTM1-215ENST00000514093 MCF2L2Q86YR7 1114 aa23.75■■□□□ 1.39
SQSTM1-215ENST00000514093 PABPC5Q96DU9 382 aaKnown RBP23.75■■□□□ 1.39
SQSTM1-215ENST00000514093 YME1L1Q96TA2 773 aa23.75■■□□□ 1.39
SQSTM1-215ENST00000514093 OSBPL7Q9BZF2 842 aa23.75■■□□□ 1.39
SQSTM1-215ENST00000514093 SALL3Q9BXA9 1300 aa23.75■■□□□ 1.39
SQSTM1-215ENST00000514093 H3BNC9 293 aa23.74■■□□□ 1.39
SQSTM1-215ENST00000514093 ZP2Q05996 745 aa23.74■■□□□ 1.39
SQSTM1-215ENST00000514093 QRICH1Q2TAL8 776 aa23.74■■□□□ 1.39
SQSTM1-215ENST00000514093 HSDL1Q3SXM5 330 aa23.74■■□□□ 1.39
SQSTM1-215ENST00000514093 TIGD5Q53EQ6 642 aa23.74■■□□□ 1.39
SQSTM1-215ENST00000514093 PLEKHG4Q58EX7 1191 aa23.74■■□□□ 1.39
SQSTM1-215ENST00000514093 PXMP2Q9NR77 195 aa23.74■■□□□ 1.39
SQSTM1-215ENST00000514093 EMSYQ7Z589 1322 aa23.74■■□□□ 1.39
SQSTM1-215ENST00000514093 MYH7BA7E2Y1 1941 aa23.74■■□□□ 1.39
SQSTM1-215ENST00000514093 DHX16O60231 1041 aaKnown RBP23.73■■□□□ 1.39
SQSTM1-215ENST00000514093 CFBP00751 764 aa23.73■■□□□ 1.39
SQSTM1-215ENST00000514093 MYCLP12524 364 aaPredicted RBP23.73■■□□□ 1.39
SQSTM1-215ENST00000514093 SERINC5Q86VE9 423 aa23.73■■□□□ 1.39
SQSTM1-215ENST00000514093 TMEM192Q8IY95 271 aa23.73■■□□□ 1.39
SQSTM1-215ENST00000514093 PNMA1Q8ND90 353 aa23.73■■□□□ 1.39
SQSTM1-215ENST00000514093 ZFP91Q96JP5 570 aaPredicted RBP23.73■■□□□ 1.39
SQSTM1-215ENST00000514093 SPATA33Q96N06 139 aa23.73■■□□□ 1.39
SQSTM1-215ENST00000514093 CLDND1Q9NY35 253 aa23.73■■□□□ 1.39
SQSTM1-215ENST00000514093 MRPL11Q9Y3B7 192 aaKnown RBP23.73■■□□□ 1.39
SQSTM1-215ENST00000514093 NEDD4P46934 1319 aa23.73■■□□□ 1.39
SQSTM1-215ENST00000514093 MICAL3Q7RTP6 2002 aa23.72■■□□□ 1.39
SQSTM1-215ENST00000514093 WDFY4Q6ZS81 3184 aa23.72■■□□□ 1.39
SQSTM1-215ENST00000514093 PPFIA4O75335 1185 aa23.72■■□□□ 1.39
SQSTM1-215ENST00000514093 RGS20O76081 388 aa23.72■■□□□ 1.39
SQSTM1-215ENST00000514093 MYSM1Q5VVJ2 828 aa23.72■■□□□ 1.39
SQSTM1-215ENST00000514093 FBXO11Q86XK2 927 aa23.72■■□□□ 1.39
SQSTM1-215ENST00000514093 TOP1MTQ969P6 601 aa23.72■■□□□ 1.39
SQSTM1-215ENST00000514093 SAMD11Q96NU1 681 aa23.72■■□□□ 1.39
SQSTM1-215ENST00000514093 GGPS1O95749 300 aa23.71■■□□□ 1.39
SQSTM1-215ENST00000514093 CTSHP09668 335 aa23.71■■□□□ 1.39
SQSTM1-215ENST00000514093 HOXD8P13378 290 aaPredicted RBP23.71■■□□□ 1.39
SQSTM1-215ENST00000514093 SP2Q02086 613 aa23.71■■□□□ 1.39
SQSTM1-215ENST00000514093 NMIQ13287 307 aaPredicted RBP23.71■■□□□ 1.39
SQSTM1-215ENST00000514093 CLUL1Q15846 466 aa23.71■■□□□ 1.39
SQSTM1-215ENST00000514093 CELF3Q5SZQ8 465 aaKnown RBP23.71■■□□□ 1.39
SQSTM1-215ENST00000514093 DGKHQ86XP1 1220 aa23.71■■□□□ 1.39
SQSTM1-215ENST00000514093 ESR2Q92731 530 aa23.71■■□□□ 1.39
SQSTM1-215ENST00000514093 ATP6V0A1Q93050 837 aa23.71■■□□□ 1.39
SQSTM1-215ENST00000514093 C16orf70Q9BSU1 422 aa23.71■■□□□ 1.39
SQSTM1-215ENST00000514093 MAF1Q9H063 256 aa23.71■■□□□ 1.39
SQSTM1-215ENST00000514093 NSUN3Q9H649 340 aaKnown RBP23.71■■□□□ 1.39
SQSTM1-215ENST00000514093 C17orf102A2RUQ5 167 aa23.7■■□□□ 1.38
SQSTM1-215ENST00000514093 TREHO43280 583 aa23.7■■□□□ 1.38
SQSTM1-215ENST00000514093 ANKRD45Q5TZF3 282 aa23.7■■□□□ 1.38
SQSTM1-215ENST00000514093 HFE2Q6ZVN8 426 aa23.7■■□□□ 1.38
SQSTM1-215ENST00000514093 SEPT8Q92599 483 aa23.7■■□□□ 1.38
SQSTM1-215ENST00000514093 KAT14Q9H8E8 782 aa23.7■■□□□ 1.38
SQSTM1-215ENST00000514093 JMJD4Q9H9V9 463 aa23.7■■□□□ 1.38
SQSTM1-215ENST00000514093 FAM50BQ9Y247 325 aa23.7■■□□□ 1.38
SQSTM1-215ENST00000514093 ZMYM6O95789 1325 aa23.69■■□□□ 1.38
SQSTM1-215ENST00000514093 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.69■■□□□ 1.38
SQSTM1-215ENST00000514093 C19orf67A6NJJ6 358 aa23.69■■□□□ 1.38
SQSTM1-215ENST00000514093 OPLAHO14841 1288 aa23.69■■□□□ 1.38
SQSTM1-215ENST00000514093 IRS1P35568 1242 aa23.69■■□□□ 1.38
SQSTM1-215ENST00000514093 LTBRP36941 435 aa23.69■■□□□ 1.38
SQSTM1-215ENST00000514093 RPAINQ86UA6 219 aa23.69■■□□□ 1.38
SQSTM1-215ENST00000514093 ADHFE1Q8IWW8 467 aa23.69■■□□□ 1.38
SQSTM1-215ENST00000514093 GPKOWQ92917 476 aaPredicted RBP eCLIP23.69■■□□□ 1.38
SQSTM1-215ENST00000514093 RNF41Q9H4P4 317 aaPredicted RBP23.69■■□□□ 1.38
SQSTM1-215ENST00000514093 PRKAG3Q9UGI9 489 aa23.69■■□□□ 1.38
SQSTM1-215ENST00000514093 CCDC171Q6TFL3 1326 aa23.68■■□□□ 1.38
SQSTM1-215ENST00000514093 KDM4AO75164 1064 aa23.68■■□□□ 1.38
SQSTM1-215ENST00000514093 PCP11498 1178 aaKnown RBP23.68■■□□□ 1.38
SQSTM1-215ENST00000514093 COL19A1Q14993 1142 aa23.68■■□□□ 1.38
SQSTM1-215ENST00000514093 IL31RAQ8NI17 732 aa23.68■■□□□ 1.38
SQSTM1-215ENST00000514093 PDCD2LQ9BRP1 358 aa23.68■■□□□ 1.38
SQSTM1-215ENST00000514093 IFIH1Q9BYX4 1025 aaKnown RBP23.68■■□□□ 1.38
SQSTM1-215ENST00000514093 BCAS3Q9H6U6 928 aa23.68■■□□□ 1.38
SQSTM1-215ENST00000514093 CSPG5O95196 566 aa23.67■■□□□ 1.38
SQSTM1-215ENST00000514093 SMIM10L2AP0DMW4 78 aa23.67■■□□□ 1.38
SQSTM1-215ENST00000514093 SMIM10L2BP0DMW5 78 aa23.67■■□□□ 1.38
SQSTM1-215ENST00000514093 UBA1P22314 1058 aaKnown RBP23.67■■□□□ 1.38
SQSTM1-215ENST00000514093 HOXA13P31271 388 aaPredicted RBP23.67■■□□□ 1.38
SQSTM1-215ENST00000514093 HSD17B4P51659 736 aa23.67■■□□□ 1.38
SQSTM1-215ENST00000514093 DLX2Q07687 328 aaPredicted RBP23.67■■□□□ 1.38
SQSTM1-215ENST00000514093 ASPRV1Q53RT3 343 aa23.67■■□□□ 1.38
SQSTM1-215ENST00000514093 RNPEPQ9H4A4 650 aa23.67■■□□□ 1.38
SQSTM1-215ENST00000514093 MLXIPQ9HAP2 919 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms