RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 FDX1P10109 184 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 RPA1P27694 616 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 SPP2Q13103 211 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 KRT31Q15323 416 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 PRAMEF18Q5VWM3 479 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 DYMQ7RTS9 669 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 SAMD3Q8N6K7 520 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 ZNF280CQ8ND82 737 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 CCDC112Q8NEF3 446 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 NOC3LQ8WTT2 800 aaKnown RBP16.7■□□□□ 0.26
VCAN-211ENST00000513984 P2RX5Q93086 422 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
VCAN-211ENST00000513984 DNAJC19Q96DA6 116 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 KLRG1Q96E93 195 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 C12orf42Q96LP6 360 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 THAP9Q9H5L6 903 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 RPAP3Q9H6T3 665 aaPredicted RBP16.7■□□□□ 0.26
VCAN-211ENST00000513984 PNMA2Q9UL42 364 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 RPTORQ8N122 1335 aa16.69■□□□□ 0.26
VCAN-211ENST00000513984 LOC285556D6RIA3 1793 aa16.69■□□□□ 0.26
VCAN-211ENST00000513984 KCNJ18B7U540 433 aa16.69■□□□□ 0.26
VCAN-211ENST00000513984 TEX33O43247 280 aa16.69■□□□□ 0.26
VCAN-211ENST00000513984 PSMD2Q13200 908 aa16.69■□□□□ 0.26
VCAN-211ENST00000513984 KCNJ12Q14500 433 aa16.69■□□□□ 0.26
VCAN-211ENST00000513984 PTPN21Q16825 1174 aa16.69■□□□□ 0.26
VCAN-211ENST00000513984 NOL9Q5SY16 702 aaKnown RBP16.69■□□□□ 0.26
VCAN-211ENST00000513984 NCAPH2Q6IBW4 605 aa16.69■□□□□ 0.26
VCAN-211ENST00000513984 MCF2L2Q86YR7 1114 aa16.69■□□□□ 0.26
VCAN-211ENST00000513984 IRF2BP1Q8IU81 584 aa16.69■□□□□ 0.26
VCAN-211ENST00000513984 ANKRD20A12PQ8NF67 263 aa16.69■□□□□ 0.26
VCAN-211ENST00000513984 TMX1Q9H3N1 280 aa16.69■□□□□ 0.26
VCAN-211ENST00000513984 E9PMD0 336 aa16.68■□□□□ 0.26
VCAN-211ENST00000513984 PLA2G4BP0C869 781 aa16.68■□□□□ 0.26
VCAN-211ENST00000513984 SPATA31C1P0DKV0 1188 aa16.68■□□□□ 0.26
VCAN-211ENST00000513984 SETQ01105 290 aaPredicted RBP16.68■□□□□ 0.26
VCAN-211ENST00000513984 CEP55Q53EZ4 464 aa16.68■□□□□ 0.26
VCAN-211ENST00000513984 CATSPER3Q86XQ3 398 aa16.68■□□□□ 0.26
VCAN-211ENST00000513984 SLC5A5Q92911 643 aa16.68■□□□□ 0.26
VCAN-211ENST00000513984 TRIM47Q96LD4 638 aa16.68■□□□□ 0.26
VCAN-211ENST00000513984 DUSP9Q99956 384 aaKnown RBP16.68■□□□□ 0.26
VCAN-211ENST00000513984 MAP3K20Q9NYL2 800 aaKnown RBP16.68■□□□□ 0.26
VCAN-211ENST00000513984 ITIH6Q6UXX5 1313 aa16.68■□□□□ 0.26
VCAN-211ENST00000513984 NFIBO00712 420 aa16.68■□□□□ 0.26
VCAN-211ENST00000513984 PSMD10O75832 226 aa16.68■□□□□ 0.26
VCAN-211ENST00000513984 EEF1GP26641 437 aaKnown RBP16.68■□□□□ 0.26
VCAN-211ENST00000513984 COPB1P53618 953 aaKnown RBP16.68■□□□□ 0.26
VCAN-211ENST00000513984 SUPT20HL1Q3ZLR7 823 aa16.68■□□□□ 0.26
VCAN-211ENST00000513984 GUF1Q8N442 669 aaKnown RBP16.68■□□□□ 0.26
VCAN-211ENST00000513984 KCTD17Q8N5Z5 321 aa16.68■□□□□ 0.26
VCAN-211ENST00000513984 POLR3CQ9BUI4 534 aaPredicted RBP16.68■□□□□ 0.26
VCAN-211ENST00000513984 RAVER2Q9HCJ3 691 aaKnown RBP16.68■□□□□ 0.26
VCAN-211ENST00000513984 SLC39A2Q9NP94 309 aa16.68■□□□□ 0.26
VCAN-211ENST00000513984 FRMPD4Q14CM0 1322 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 POTEFA5A3E0 1075 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 C19orf81C9J6K1 198 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 MEIS1O00470 390 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 POTEIP0CG38 1075 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 IDEP14735 1019 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 SLC12A3P55017 1021 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 COASYQ13057 564 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 PPP2R5CQ13362 524 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 DNTTIP2Q5QJE6 756 aaKnown RBP16.67■□□□□ 0.26
VCAN-211ENST00000513984 CENPPQ6IPU0 288 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 POTEGQ6S5H5 508 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 POTEEQ6S8J3 1075 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 HPS3Q969F9 1004 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 BMP2KQ9NSY1 1161 aaPredicted RBP16.67■□□□□ 0.26
VCAN-211ENST00000513984 COL20A1Q9P218 1284 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 FZD1Q9UP38 647 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 UTRNP46939 3433 aa16.67■□□□□ 0.26
VCAN-211ENST00000513984 VWA5AO00534 786 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 ZBED4O75132 1171 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 DDNO94850 711 aaPredicted RBP16.66■□□□□ 0.26
VCAN-211ENST00000513984 ALAS1P13196 640 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 CYP11B2P19099 503 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 TERF1P54274 439 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 UBXN2AP68543 259 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 ANKRD40Q6AI12 368 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 FOXR2Q6PJQ5 311 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 OTOP1Q7RTM1 612 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 CPXCR1Q8N123 301 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 CSGALNACT2Q8N6G5 542 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 TC2NQ8N9U0 490 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.66■□□□□ 0.26
VCAN-211ENST00000513984 SRRTQ9BXP5 876 aaKnown RBP16.66■□□□□ 0.26
VCAN-211ENST00000513984 ADARB2Q9NS39 739 aaKnown RBP16.66■□□□□ 0.26
VCAN-211ENST00000513984 MYH11P35749 1972 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 EML1O00423 815 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 N4BP3O15049 544 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 BCRP11274 1271 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 MUM1L1Q5H9M0 696 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 LRCH2Q5VUJ6 765 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 GPBP1Q86WP2 473 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 TMEM139Q8IV31 216 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 EIF2AK1Q9BQI3 630 aaKnown RBP16.66■□□□□ 0.26
VCAN-211ENST00000513984 PANK4Q9NVE7 773 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 TAB2Q9NYJ8 693 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 RNF181Q9P0P0 153 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 ZHX2Q9Y6X8 837 aa16.66■□□□□ 0.26
VCAN-211ENST00000513984 WDR81Q562E7 1941 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms