RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 RAG1P15918 1043 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 MX1P20591 662 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 STAT2P52630 851 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 TFAP4Q01664 338 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 CENPCQ03188 943 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 PPARAQ07869 468 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 IKQ13123 557 aaPredicted RBP8.5□□□□□ -1.05
USP46-208ENST00000512656 TKFCQ3LXA3 575 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 RIPOR1Q6ZS17 1223 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 TICAM2Q86XR7 235 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 LRRC47Q8N1G4 583 aaKnown RBP8.5□□□□□ -1.05
USP46-208ENST00000512656 PCSK9Q8NBP7 692 aaKnown RBP8.5□□□□□ -1.05
USP46-208ENST00000512656 PI4K2BQ8TCG2 481 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 WHAMMQ8TF30 809 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 BADQ92934 168 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 TRERF1Q96PN7 1200 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 ABHD16BQ9H3Z7 469 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 RAVER2Q9HCJ3 691 aaKnown RBP8.5□□□□□ -1.05
USP46-208ENST00000512656 TIMMDC1Q9NPL8 285 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 DOLKQ9UPQ8 538 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 RIPK3Q9Y572 518 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 TRIM43BA6NCK2 446 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 TSPY2A6NKD2 308 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 KIAA0355O15063 1070 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 PLA2G6O60733 806 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 PQBP1O60828 265 aaKnown RBP8.49□□□□□ -1.05
USP46-208ENST00000512656 ADAMTS4O75173 837 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 SNAI1O95863 264 aaPredicted RBP8.49□□□□□ -1.05
USP46-208ENST00000512656 SOX11P35716 441 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 SLC1A4P43007 532 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 ACLYP53396 1101 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 SMAD3P84022 425 aaKnown RBP8.49□□□□□ -1.05
USP46-208ENST00000512656 ACVR2BQ13705 512 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 SHHQ15465 462 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 CCDC174Q6PII3 467 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 STAG1Q8WVM7 1258 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 TRIM43Q96BQ3 446 aaPredicted RBP8.49□□□□□ -1.05
USP46-208ENST00000512656 GLT1D1Q96MS3 346 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 TOX2Q96NM4 488 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 SEC62Q99442 399 aaKnown RBP8.49□□□□□ -1.05
USP46-208ENST00000512656 GAS2L1Q99501 681 aaPredicted RBP8.49□□□□□ -1.05
USP46-208ENST00000512656 ACAD9Q9H845 621 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 STARD7Q9NQZ5 370 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 ENAMQ9NRM1 1142 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 TMEM39AQ9NV64 488 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 STX8Q9UNK0 236 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 PARP14Q460N5 1801 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 ELP1O95163 1332 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 MROH7Q68CQ1 1323 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 SYNRGQ9UMZ2 1314 aa8.49□□□□□ -1.05
USP46-208ENST00000512656 GREB1LQ9C091 1923 aaPredicted RBP8.48□□□□□ -1.05
USP46-208ENST00000512656 ZNFX1Q9P2E3 1918 aaKnown RBP8.48□□□□□ -1.05
USP46-208ENST00000512656 ASB14A6NK59 587 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 C6orf222P0C671 652 aaPredicted RBP8.48□□□□□ -1.05
USP46-208ENST00000512656 CST5P28325 142 aaPredicted RBP8.48□□□□□ -1.05
USP46-208ENST00000512656 FPGSQ05932 587 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 LBRQ14739 615 aaKnown RBP8.48□□□□□ -1.05
USP46-208ENST00000512656 KCNA10Q16322 511 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 CCDC144BQ3MJ40 725 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 GNASQ5JWF2 1037 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 ANKRD45Q5TZF3 282 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 RCSD1Q6JBY9 416 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 ARMCX2Q7L311 632 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 ANKRD33Q7Z3H0 272 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 TMEM151AQ8N4L1 468 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 KLHDC9Q8NEP7 349 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 OTUD7AQ8TE49 926 aaPredicted RBP8.48□□□□□ -1.05
USP46-208ENST00000512656 VTI1AQ96AJ9 217 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 EVI5LQ96CN4 794 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 SCARF2Q96GP6 870 aaPredicted RBP8.48□□□□□ -1.05
USP46-208ENST00000512656 HELLSQ9NRZ9 838 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 HOMER2Q9NSB8 354 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 TTC28Q96AY4 2481 aa8.48□□□□□ -1.05
USP46-208ENST00000512656 SMCHD1A6NHR9 2005 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 COL11A1P12107 1806 aaPredicted RBP8.47□□□□□ -1.05
USP46-208ENST00000512656 A0A0U1RQG5 324 aaPredicted RBP8.47□□□□□ -1.05
USP46-208ENST00000512656 A0A1B0GTH6 734 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 TLR3O15455 904 aaKnown RBP8.47□□□□□ -1.05
USP46-208ENST00000512656 ORC4O43929 436 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 RANBP6O60518 1105 aaKnown RBP8.47□□□□□ -1.05
USP46-208ENST00000512656 CELA2BP08218 269 aaPredicted RBP8.47□□□□□ -1.05
USP46-208ENST00000512656 MCCP23508 829 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 RRP1P56182 461 aaKnown RBP8.47□□□□□ -1.05
USP46-208ENST00000512656 GJA9P57773 515 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 AAMPQ13685 434 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 ALX1Q15699 326 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 MAP7D1Q3KQU3 841 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 C9orf50Q5SZB4 431 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 KANK3Q6NY19 840 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 LYPD4Q6UWN0 246 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 NOL8Q76FK4 1167 aaKnown RBP8.47□□□□□ -1.05
USP46-208ENST00000512656 RNF135Q8IUD6 432 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 CCDC144CPQ8IYA2 1237 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 LENG1Q96BZ8 264 aaPredicted RBP8.47□□□□□ -1.05
USP46-208ENST00000512656 RNPC3Q96LT9 517 aaKnown RBP8.47□□□□□ -1.05
USP46-208ENST00000512656 ZSCAN10Q96SZ4 725 aaPredicted RBP8.47□□□□□ -1.05
USP46-208ENST00000512656 UPF3AQ9H1J1 476 aaKnown RBP8.47□□□□□ -1.05
USP46-208ENST00000512656 RAB6BQ9NRW1 208 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 RNF146Q9NTX7 359 aa8.47□□□□□ -1.05
USP46-208ENST00000512656 ANAPC4Q9UJX5 808 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms