RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 C19orf81C9J6K1 198 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 SH2B2O14492 632 aaPredicted RBP11.01□□□□□ -0.65
SNF8-211ENST00000512243 TOP1P11387 765 aaKnown RBP11.01□□□□□ -0.65
SNF8-211ENST00000512243 CPA1P15085 419 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 BACE1P56817 501 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 GADL1Q6ZQY3 521 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 RUFY3Q7L099 469 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 PRRT2Q7Z6L0 340 aaPredicted RBP11.01□□□□□ -0.65
SNF8-211ENST00000512243 DGKHQ86XP1 1220 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 TCEANC2Q96MN5 208 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 TTC14Q96N46 770 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 LRRC2Q9BYS8 371 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 UPF3BQ9BZI7 483 aaKnown RBP11.01□□□□□ -0.65
SNF8-211ENST00000512243 KIAA1683Q9H0B3 1180 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 SUV39H2Q9H5I1 410 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 KAT14Q9H8E8 782 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 SYNPO2Q9UMS6 1093 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 TMX2Q9Y320 296 aa11.01□□□□□ -0.65
SNF8-211ENST00000512243 CCL15-CCL14A0A0B4J2E2 113 aa11□□□□□ -0.65
SNF8-211ENST00000512243 A0A1W2PRG0 241 aa11□□□□□ -0.65
SNF8-211ENST00000512243 MANSC4A6NHS7 340 aaPredicted RBP11□□□□□ -0.65
SNF8-211ENST00000512243 FAM155AB1AL88 458 aaPredicted RBP11□□□□□ -0.65
SNF8-211ENST00000512243 CETPP11597 493 aa11□□□□□ -0.65
SNF8-211ENST00000512243 IGFBP4P22692 258 aa11□□□□□ -0.65
SNF8-211ENST00000512243 NOVP48745 357 aa11□□□□□ -0.65
SNF8-211ENST00000512243 DGKGP49619 791 aa11□□□□□ -0.65
SNF8-211ENST00000512243 HMGCS2P54868 508 aa11□□□□□ -0.65
SNF8-211ENST00000512243 EXOSC10Q01780 885 aaKnown RBP11□□□□□ -0.65
SNF8-211ENST00000512243 SREBF2Q12772 1141 aa11□□□□□ -0.65
SNF8-211ENST00000512243 NOGQ13253 232 aa11□□□□□ -0.65
SNF8-211ENST00000512243 COL9A3Q14050 684 aaPredicted RBP11□□□□□ -0.65
SNF8-211ENST00000512243 SEC23AQ15436 765 aa11□□□□□ -0.65
SNF8-211ENST00000512243 CCL15Q16663 113 aa11□□□□□ -0.65
SNF8-211ENST00000512243 LINC00114Q6XXX2 140 aa11□□□□□ -0.65
SNF8-211ENST00000512243 NFXL1Q6ZNB6 911 aa11□□□□□ -0.65
SNF8-211ENST00000512243 MKL1Q969V6 931 aa11□□□□□ -0.65
SNF8-211ENST00000512243 TMEM47Q9BQJ4 181 aa11□□□□□ -0.65
SNF8-211ENST00000512243 VCPKMTQ9H867 229 aa11□□□□□ -0.65
SNF8-211ENST00000512243 LY9Q9HBG7 655 aa11□□□□□ -0.65
SNF8-211ENST00000512243 PDRG1Q9NUG6 133 aa11□□□□□ -0.65
SNF8-211ENST00000512243 MTMR7Q9Y216 660 aa11□□□□□ -0.65
SNF8-211ENST00000512243 BAZ2BQ9UIF8 2168 aaKnown RBP10.99□□□□□ -0.65
SNF8-211ENST00000512243 CCDC69A6NI79 296 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 COL8A1P27658 744 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 LIFRP42702 1097 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 SPEM2Q0P670 501 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 RABEP1Q15276 862 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 PLA2G4EQ3MJ16 856 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 RCSD1Q6JBY9 416 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 Q6ZUG5 572 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 FASTKD5Q7L8L6 764 aaKnown RBP10.99□□□□□ -0.65
SNF8-211ENST00000512243 SIAH1Q8IUQ4 282 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 TMTC2Q8N394 836 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 GMCL1P1Q8NEA9 526 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 IGDCC4Q8TDY8 1250 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 ANKS1AQ92625 1134 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 LPAR1Q92633 364 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 C12orf42Q96LP6 360 aa10.99□□□□□ -0.65
SNF8-211ENST00000512243 ISY1Q9ULR0 285 aaKnown RBP10.99□□□□□ -0.65
SNF8-211ENST00000512243 COL11A1P12107 1806 aaPredicted RBP10.99□□□□□ -0.65
SNF8-211ENST00000512243 WDR33Q9C0J8 1336 aaKnown RBP10.99□□□□□ -0.65
SNF8-211ENST00000512243 RLFQ13129 1914 aa10.98□□□□□ -0.65
SNF8-211ENST00000512243 WDR46O15213 610 aaKnown RBP10.98□□□□□ -0.65
SNF8-211ENST00000512243 AOC2O75106 756 aa10.98□□□□□ -0.65
SNF8-211ENST00000512243 NDUFB10O96000 172 aa10.98□□□□□ -0.65
SNF8-211ENST00000512243 VCAM1P19320 739 aa10.98□□□□□ -0.65
SNF8-211ENST00000512243 NEK4P51957 841 aa10.98□□□□□ -0.65
SNF8-211ENST00000512243 CCDC96Q2M329 555 aa10.98□□□□□ -0.65
SNF8-211ENST00000512243 SLFN13Q68D06 897 aa10.98□□□□□ -0.65
SNF8-211ENST00000512243 SYNE3Q6ZMZ3 975 aa10.98□□□□□ -0.65
SNF8-211ENST00000512243 CATIPQ7Z7H3 387 aa10.98□□□□□ -0.65
SNF8-211ENST00000512243 SPICE1Q8N0Z3 855 aa10.98□□□□□ -0.65
SNF8-211ENST00000512243 DCAF4Q8WV16 495 aa10.98□□□□□ -0.65
SNF8-211ENST00000512243 NAP1L2Q9ULW6 460 aaPredicted RBP10.98□□□□□ -0.65
SNF8-211ENST00000512243 CEP350Q5VT06 3117 aa10.98□□□□□ -0.65
SNF8-211ENST00000512243 A0A0G2JMZ2 1700 aa10.98□□□□□ -0.65
SNF8-211ENST00000512243 F5H6K3 240 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 DDAH1O94760 285 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 ITGB2P05107 769 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 SLC1A4P43007 532 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 KIF23Q02241 960 aaPredicted RBP10.97□□□□□ -0.65
SNF8-211ENST00000512243 KLRC3Q07444 240 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 PABPC4Q13310 644 aaKnown RBP eCLIP10.97□□□□□ -0.652e-11■■■□□ 14.9
SNF8-211ENST00000512243 DGKZQ13574 1117 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 ANKRD1Q15327 319 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 RTN1Q16799 776 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 BTLAQ7Z6A9 289 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 SGMS1Q86VZ5 419 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 ZNF654Q8IZM8 581 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 FBXL16Q8N461 479 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 FAM200AQ8TCP9 573 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 BRI3BPQ8WY22 251 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 BRF1Q92994 677 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 KIF2CQ99661 725 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 AGXT2Q9BYV1 514 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 TANGO6Q9C0B7 1094 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 RPAP3Q9H6T3 665 aaPredicted RBP10.97□□□□□ -0.65
SNF8-211ENST00000512243 AGTPBP1Q9UPW5 1226 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 SLC12A7Q9Y666 1083 aa10.97□□□□□ -0.65
SNF8-211ENST00000512243 ELOA3CA0A087WX78 387 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms