RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 ZBTB9Q96C00 473 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 PPP1R13BQ96KQ4 1090 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 NDUFB10O96000 172 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 H2AFZP0C0S5 128 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 H2AFVQ71UI9 128 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 METTL16Q86W50 562 aaKnown RBP14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 RMDN3Q96TC7 470 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 NDST4Q9H3R1 872 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 SEPT9Q9UHD8 586 aaPredicted RBP14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 SERPINA10Q9UK55 444 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 KNDC1Q76NI1 1749 aa14.39□□□□□ -0.11
PCDHA4-202ENST00000512229 RASA3Q14644 834 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 ADGRA1Q86SQ6 560 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 SLC16A10Q8TF71 515 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 CCSER1Q9C0I3 900 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 BCL2L12Q9HB09 334 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 CNTNAP5Q8WYK1 1306 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 KRT19P08727 400 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 ABCB4P21439 1286 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 ZBED6P86452 979 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 HDLBPQ00341 1268 aaKnown RBP14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 CALCOCO2Q13137 446 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 ARID5BQ14865 1188 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 ERCC6LQ2NKX8 1250 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 SEPT14Q6ZU15 432 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 SLC17A8Q8NDX2 589 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 MTRF1LQ9UGC7 380 aaKnown RBP14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 NOD1Q9Y239 953 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 FAM160B1Q5W0V3 765 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 USP49Q70CQ1 688 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 PIGOQ8TEQ8 1089 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 RPGRIP1Q96KN7 1286 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 CCDC77Q9BR77 488 aa14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 RAVER2Q9HCJ3 691 aaKnown RBP14.38□□□□□ -0.11
PCDHA4-202ENST00000512229 KIF4AO95239 1232 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 CCND2P30279 289 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 PPP1R7Q15435 360 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 CFAP58Q5T655 872 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 RSBN1LQ6PCB5 846 aaPredicted RBP14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 ARMC9Q7Z3E5 817 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 LRP10Q7Z4F1 713 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 NFAT5O94916 1531 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 GOLGA6L7A0A1B0GV03 622 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 E9PMD0 336 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 ATP2A1O14983 1001 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 AFPP02771 609 aaKnown RBP14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 PPP2R5AQ15172 486 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 EZH2Q15910 746 aaKnown RBP14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 MAP2K1Q02750 393 aaPredicted RBP14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 WHAMMP3Q1A5X7 153 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 CCDC94Q9BW85 323 aaPredicted RBP14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 TMEM206Q9H813 350 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 HOXC10Q9NYD6 342 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 BZW2Q9Y6E2 419 aaKnown RBP14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 FMN2Q9NZ56 1722 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 PIK3C2AO00443 1686 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 PRPF6O94906 941 aaKnown RBP14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 FBXL16Q8N461 479 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 FAM151AQ8WW52 585 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 ACCSQ96QU6 501 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 KMT5AQ9NQR1 393 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 C1orf112Q9NSG2 853 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 MYO1AQ9UBC5 1043 aa14.37□□□□□ -0.11
PCDHA4-202ENST00000512229 POTEB3A0JP26 581 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 POTECB2RU33 542 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 DCUN1D2Q6PH85 259 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 POTEBQ6S5H4 581 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 DHX37Q8IY37 1157 aaKnown RBP14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 TRIM49BA6NDI0 452 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 TCP1P17987 556 aaKnown RBP14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 OSBPP22059 807 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 SMARCA1P28370 1054 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 SEC23AQ15436 765 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 PPP4R3CPQ6ZMV5 832 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 PANX2Q96RD6 677 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 OGFRQ9NZT2 677 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 IKBKGQ9Y6K9 419 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 ABCB11O95342 1321 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 PDS5AQ29RF7 1337 aaKnown RBP14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 SFI1A8K8P3 1242 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 MTMR1Q13613 665 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 PDIA5Q14554 519 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 EEPD1Q7L9B9 569 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 DPP9Q86TI2 863 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 APOBEC3FQ8IUX4 373 aaKnown RBP14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 RAD54LQ92698 747 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 ZMYND12Q9H0C1 365 aa14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 ZNF70Q9UC06 446 aaPredicted RBP14.36□□□□□ -0.11
PCDHA4-202ENST00000512229 UBE2Q2LH0YL09 131 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 STXBP3O00186 592 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 TMOD1P28289 359 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 SEMA3FQ13275 785 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 IQCB1Q15051 598 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 ZRSR2Q15696 482 aaKnown RBP14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 MIS18BP1Q6P0N0 1132 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 MB21D1Q8N884 522 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 AMFRQ9UKV5 643 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 BUB1O43683 1085 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 PDXDC2PQ6P474 469 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 CCDC25Q86WR0 208 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms