RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 BICD2Q8TD16 824 aa14.29□□□□□ -0.12
PTCD2-209ENST00000511752 EMID1Q96A84 441 aaPredicted RBP14.29□□□□□ -0.12
PTCD2-209ENST00000511752 MTG1Q9BT17 334 aaPredicted RBP14.29□□□□□ -0.12
PTCD2-209ENST00000511752 ANO3Q9BYT9 981 aa14.29□□□□□ -0.12
PTCD2-209ENST00000511752 MKI67P46013 3256 aaKnown RBP14.29□□□□□ -0.12
PTCD2-209ENST00000511752 TLR3O15455 904 aaKnown RBP14.28□□□□□ -0.12
PTCD2-209ENST00000511752 PQBP1O60828 265 aaKnown RBP14.28□□□□□ -0.12
PTCD2-209ENST00000511752 GGPS1O95749 300 aa14.28□□□□□ -0.12
PTCD2-209ENST00000511752 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
PTCD2-209ENST00000511752 RBM25P49756 843 aaKnown RBP14.28□□□□□ -0.12
PTCD2-209ENST00000511752 CLK2P49760 499 aaKnown RBP14.28□□□□□ -0.12
PTCD2-209ENST00000511752 PURAQ00577 322 aaKnown RBP14.28□□□□□ -0.12
PTCD2-209ENST00000511752 ITGA7Q13683 1181 aa14.28□□□□□ -0.12
PTCD2-209ENST00000511752 ANKRD33Q7Z3H0 272 aa14.28□□□□□ -0.12
PTCD2-209ENST00000511752 REXO1Q8N1G1 1221 aaKnown RBP14.28□□□□□ -0.12
PTCD2-209ENST00000511752 AFG1LQ8WV93 481 aa14.28□□□□□ -0.12
PTCD2-209ENST00000511752 CDHR1Q96JP9 859 aa14.28□□□□□ -0.12
PTCD2-209ENST00000511752 TOX2Q96NM4 488 aa14.28□□□□□ -0.12
PTCD2-209ENST00000511752 MLXIPQ9HAP2 919 aa14.28□□□□□ -0.12
PTCD2-209ENST00000511752 PRDM5Q9NQX1 630 aaPredicted RBP14.28□□□□□ -0.12
PTCD2-209ENST00000511752 VPS54Q9P1Q0 977 aa14.28□□□□□ -0.12
PTCD2-209ENST00000511752 SPATA31C2B4DYI2 1134 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 MMP3P08254 477 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 CLTBP09497 229 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 CDK7P50613 346 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 NLRP5P59047 1200 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 NEDD9Q14511 834 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 DGKDQ16760 1214 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 ME3Q16798 604 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 CELF3Q5SZQ8 465 aaKnown RBP14.27□□□□□ -0.13
PTCD2-209ENST00000511752 MYSM1Q5VVJ2 828 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 JAKMIP3Q5VZ66 844 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 FAM177A1Q8N128 213 aaPredicted RBP14.27□□□□□ -0.13
PTCD2-209ENST00000511752 GIMAP8Q8ND71 665 aaPredicted RBP14.27□□□□□ -0.13
PTCD2-209ENST00000511752 PPTC7Q8NI37 304 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 GPRASP2Q96D09 838 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 PGBD1Q96JS3 809 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 SPATA33Q96N06 139 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 TMEM260Q9NX78 707 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 UBIAD1Q9Y5Z9 338 aa14.27□□□□□ -0.13
PTCD2-209ENST00000511752 STK36Q9NRP7 1315 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 MAFGO15525 162 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 XBP1P17861 261 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 SREBF1P36956 1147 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 PSMC6P62333 389 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 SP2Q02086 613 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 MTMR1Q13613 665 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 CHRDL2Q6WN34 429 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 SLC43A3Q8NBI5 491 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 WASF1Q92558 559 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 GTF3C6Q969F1 213 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 KIF2CQ99661 725 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 LBHD1Q9BQE6 289 aaPredicted RBP14.26□□□□□ -0.13
PTCD2-209ENST00000511752 SENP7Q9BQF6 1050 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 PDLIM7Q9NR12 457 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 LIMCH1Q9UPQ0 1083 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 DOCK5Q9H7D0 1870 aa14.26□□□□□ -0.13
PTCD2-209ENST00000511752 SCN10AQ9Y5Y9 1956 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 NOP56O00567 594 aaKnown RBP14.25□□□□□ -0.13
PTCD2-209ENST00000511752 SORBS3O60504 671 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 PPFIA4O75335 1185 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 ITGB5P18084 799 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 ZNF76P36508 570 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 ARHGAP4P98171 946 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 FAAP100Q0VG06 881 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 SEMA3FQ13275 785 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 RABEP1Q15276 862 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 CYFIP1Q7L576 1253 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 NECAB1Q8N987 351 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 IL27Q8NEV9 243 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 MXRA8Q9BRK3 442 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 KATNAL1Q9BW62 490 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 JADE2Q9NQC1 790 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 TMEM39AQ9NV64 488 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 COLQQ9Y215 455 aaPredicted RBP14.25□□□□□ -0.13
PTCD2-209ENST00000511752 LTBP2Q14767 1821 aa14.25□□□□□ -0.13
PTCD2-209ENST00000511752 GRIN2DO15399 1336 aa14.24□□□□□ -0.13
PTCD2-209ENST00000511752 LARGE1O95461 756 aa14.24□□□□□ -0.13
PTCD2-209ENST00000511752 RAG1P15918 1043 aa14.24□□□□□ -0.13
PTCD2-209ENST00000511752 MAGEA10P43363 369 aaPredicted RBP14.24□□□□□ -0.13
PTCD2-209ENST00000511752 NBPF20Q3BBV1 942 aa14.24□□□□□ -0.13
PTCD2-209ENST00000511752 HSDL1Q3SXM5 330 aa14.24□□□□□ -0.13
PTCD2-209ENST00000511752 CEP55Q53EZ4 464 aa14.24□□□□□ -0.13
PTCD2-209ENST00000511752 GALNT17Q6IS24 598 aa14.24□□□□□ -0.13
PTCD2-209ENST00000511752 METTL7BQ6UX53 244 aa14.24□□□□□ -0.13
PTCD2-209ENST00000511752 SH3RF1Q7Z6J0 888 aa14.24□□□□□ -0.13
PTCD2-209ENST00000511752 FAM126BQ8IXS8 530 aa14.24□□□□□ -0.13
PTCD2-209ENST00000511752 ZSCAN31Q96LW9 406 aaPredicted RBP14.24□□□□□ -0.13
PTCD2-209ENST00000511752 GDF15Q99988 308 aa14.24□□□□□ -0.13
PTCD2-209ENST00000511752 ORC3Q9UBD5 711 aaPredicted RBP14.24□□□□□ -0.13
PTCD2-209ENST00000511752 PCDHA4Q9UN74 947 aa14.24□□□□□ -0.13
PTCD2-209ENST00000511752 TRIM43BA6NCK2 446 aa14.23□□□□□ -0.13
PTCD2-209ENST00000511752 KIAA0355O15063 1070 aa14.23□□□□□ -0.13
PTCD2-209ENST00000511752 CTDNEP1O95476 244 aa14.23□□□□□ -0.13
PTCD2-209ENST00000511752 CYP3A4P08684 503 aa14.23□□□□□ -0.13
PTCD2-209ENST00000511752 HOXD8P13378 290 aaPredicted RBP14.23□□□□□ -0.13
PTCD2-209ENST00000511752 BMP8BP34820 402 aa14.23□□□□□ -0.13
PTCD2-209ENST00000511752 CHMP4BP1P59074 171 aa14.23□□□□□ -0.13
PTCD2-209ENST00000511752 MDM2Q00987 491 aaPredicted RBP14.23□□□□□ -0.13
PTCD2-209ENST00000511752 PTPN11Q06124 597 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms