RNA–Protein interactions for RNA: ENST00000511248.1

PRKAA1-208, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, human

TSL 2

Gene PRKAA1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAA1-208	ENST00000511248	CWC27	Q6UX04	472 aa	Known RBP	11.77	□□□□□ -0.53
PRKAA1-208	ENST00000511248	IQCA1	Q86XH1	822 aa		11.77	□□□□□ -0.53
PRKAA1-208	ENST00000511248	CCDC155	Q8N6L0	562 aa		11.77	□□□□□ -0.53
PRKAA1-208	ENST00000511248	CAGE1	Q8TC20	777 aa		11.77	□□□□□ -0.53
PRKAA1-208	ENST00000511248	AFAP1L1	Q8TED9	768 aa		11.77	□□□□□ -0.53
PRKAA1-208	ENST00000511248	EMID1	Q96A84	441 aa	Predicted RBP	11.77	□□□□□ -0.53
PRKAA1-208	ENST00000511248	IWS1	Q96ST2	819 aa		11.77	□□□□□ -0.53
PRKAA1-208	ENST00000511248	KIF2C	Q99661	725 aa		11.77	□□□□□ -0.53
PRKAA1-208	ENST00000511248	MAF1	Q9H063	256 aa		11.77	□□□□□ -0.53
PRKAA1-208	ENST00000511248	JMJD4	Q9H9V9	463 aa		11.77	□□□□□ -0.53
PRKAA1-208	ENST00000511248	DDX41	Q9UJV9	622 aa	Known RBP	11.77	□□□□□ -0.53
PRKAA1-208	ENST00000511248	OPLAH	O14841	1288 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	NBN	O60934	754 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	PARP1	P09874	1014 aa	Known RBP	11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	ZNF286B	P0CG31	522 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	HSPA4	P34932	840 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	KCNJ6	P48051	423 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	DEFB103A	P81534	67 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	RBL2	Q08999	1139 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	GRB10	Q13322	594 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	DGKD	Q16760	1214 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	TCTN1	Q2MV58	587 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	LRRC8D	Q7L1W4	858 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	MCF2L2	Q86YR7	1114 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	ZSWIM5	Q9P217	1185 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	GTF2IRD1	Q9UHL9	959 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	MYH6	P13533	1939 aa		11.76	□□□□□ -0.53
PRKAA1-208	ENST00000511248	LAMA4	Q16363	1823 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	DHX16	O60231	1041 aa	Known RBP	11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	ST18	O60284	1047 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	PPP1R11	O60927	126 aa	Predicted RBP	11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	EIF3J	O75822	258 aa	Known RBP	11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	F2	P00734	622 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	CXCL10	P02778	98 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	CKB	P12277	381 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	CAST	P20810	708 aa	Known RBP	11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	MCM2	P49736	904 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	NT5C2	P49902	561 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	HSD17B4	P51659	736 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	CCDC178	Q5BJE1	867 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	ARHGEF16	Q5VV41	709 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	TRAF7	Q6Q0C0	670 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	FBXO11	Q86XK2	927 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	C7orf31	Q8N865	590 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	PPTC7	Q8NI37	304 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	KCNB2	Q92953	911 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	WNT8B	Q93098	351 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	LSG1	Q9H089	658 aa	Known RBP	11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	VAT1L	Q9HCJ6	419 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	PXMP2	Q9NR77	195 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	HDAC6	Q9UBN7	1215 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	MRPL11	Q9Y3B7	192 aa	Known RBP	11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	MRVI1	Q9Y6F6	885 aa		11.75	□□□□□ -0.53
PRKAA1-208	ENST00000511248	TET1	Q8NFU7	2136 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	PI4K2B	G5E9Z4	385 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	EFCAB14	O75071	495 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	RGS20	O76081	388 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	CFB	P00751	764 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	NR3C2	P08235	984 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	HOXD8	P13378	290 aa	Predicted RBP	11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	PSEN2	P49810	448 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	ZNF200	P98182	395 aa	Predicted RBP	11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	LAMC2	Q13753	1193 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	HIC1	Q14526	733 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	MBTPS1	Q14703	1052 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	MFSD10	Q14728	455 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	KIAA0753	Q2KHM9	967 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	TRIM71	Q2Q1W2	868 aa	Known RBP	11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	CNKSR3	Q6P9H4	555 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	STAG2	Q8N3U4	1231 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	GDPD5	Q8WTR4	605 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	ALG1	Q9BT22	464 aa		11.74	□□□□□ -0.53
PRKAA1-208	ENST00000511248	HAS3	O00219	553 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	SORBS3	O60504	671 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	GJB5	O95377	273 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	HOXA13	P31271	388 aa	Predicted RBP	11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	FXR2	P51116	673 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	COL4A4	P53420	1690 aa	Predicted RBP	11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	GHRHR	Q02643	423 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	IMMT	Q16891	758 aa	Known RBP	11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	ZNF618	Q5T7W0	954 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	STOX1	Q6ZVD7	989 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	IL31RA	Q8NI17	732 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	MTMR8	Q96EF0	704 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	RAD9A	Q99638	391 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	UBAC1	Q9BSL1	405 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	ZBED2	Q9BTP6	218 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	DSCC1	Q9BVC3	393 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	KATNAL1	Q9BW62	490 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	AMN	Q9BXJ7	453 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	IL25	Q9H293	177 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	MTUS1	Q9ULD2	1270 aa		11.73	□□□□□ -0.53
PRKAA1-208	ENST00000511248	PTPRS	Q13332	1948 aa		11.72	□□□□□ -0.53
PRKAA1-208	ENST00000511248	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.72	□□□□□ -0.53
PRKAA1-208	ENST00000511248		K7ELQ4	463 aa	Predicted RBP	11.72	□□□□□ -0.53
PRKAA1-208	ENST00000511248	MYCL	P12524	364 aa	Predicted RBP	11.72	□□□□□ -0.53
PRKAA1-208	ENST00000511248	ERVK-21	P61565	698 aa		11.72	□□□□□ -0.53
PRKAA1-208	ENST00000511248	SP2	Q02086	613 aa		11.72	□□□□□ -0.53
PRKAA1-208	ENST00000511248	PTK7	Q13308	1070 aa		11.72	□□□□□ -0.53

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