RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 SEC63Q9UGP8 760 aaKnown RBP14□□□□□ -0.17
CLDND1-223ENST00000511081 SNX14Q9Y5W7 946 aa14□□□□□ -0.17
CLDND1-223ENST00000511081 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.99□□□□□ -0.17
CLDND1-223ENST00000511081 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.99□□□□□ -0.17
CLDND1-223ENST00000511081 SPATA31C2B4DYI2 1134 aa13.99□□□□□ -0.17
CLDND1-223ENST00000511081 USP17L6PQ6QN14 398 aa13.99□□□□□ -0.17
CLDND1-223ENST00000511081 ZNF365Q70YC5 407 aa13.99□□□□□ -0.17
CLDND1-223ENST00000511081 RNPC3Q96LT9 517 aaKnown RBP13.99□□□□□ -0.17
CLDND1-223ENST00000511081 CTAGE1Q96RT6 745 aa13.99□□□□□ -0.17
CLDND1-223ENST00000511081 AGXT2Q9BYV1 514 aa13.99□□□□□ -0.17
CLDND1-223ENST00000511081 WNT8AQ9H1J5 351 aa13.99□□□□□ -0.17
CLDND1-223ENST00000511081 PSTPIP2Q9H939 334 aa13.99□□□□□ -0.17
CLDND1-223ENST00000511081 RBM28Q9NW13 759 aaKnown RBP13.99□□□□□ -0.17
CLDND1-223ENST00000511081 ZBTB43O43298 467 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 F2P00734 622 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 CYP2C9P11712 490 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 SEMA3FQ13275 785 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 HSDL1Q3SXM5 330 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 PCNX4Q63HM2 1172 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 MICU3Q86XE3 530 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 RAB11FIP4Q86YS3 637 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 CCDC82Q8N4S0 544 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 HERVK_113Q902F9 699 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 GPKOWQ92917 476 aaPredicted RBP eCLIP13.98□□□□□ -0.17
CLDND1-223ENST00000511081 TCEANC2Q96MN5 208 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 SENP7Q9BQF6 1050 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 SEMA6BQ9H3T3 888 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 BCAS3Q9H6U6 928 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 STXBP5LQ9Y2K9 1186 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 EYSQ5T1H1 3165 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 CHD7Q9P2D1 2997 aa13.98□□□□□ -0.17
CLDND1-223ENST00000511081 REC8O95072 547 aa13.97□□□□□ -0.17
CLDND1-223ENST00000511081 GGPS1O95749 300 aa13.97□□□□□ -0.17
CLDND1-223ENST00000511081 FGBP02675 491 aa13.97□□□□□ -0.17
CLDND1-223ENST00000511081 ACRP10323 421 aa13.97□□□□□ -0.17
CLDND1-223ENST00000511081 UBA1P22314 1058 aaKnown RBP13.97□□□□□ -0.17
CLDND1-223ENST00000511081 CCL23P55773 120 aa13.97□□□□□ -0.17
CLDND1-223ENST00000511081 GNPTABQ3T906 1256 aa13.97□□□□□ -0.17
CLDND1-223ENST00000511081 PSRC1Q6PGN9 363 aaPredicted RBP13.97□□□□□ -0.17
CLDND1-223ENST00000511081 RPUSD2Q8IZ73 545 aaKnown RBP13.97□□□□□ -0.17
CLDND1-223ENST00000511081 SMARCC2Q8TAQ2 1214 aa13.97□□□□□ -0.17
CLDND1-223ENST00000511081 CUL5Q93034 780 aa13.97□□□□□ -0.17
CLDND1-223ENST00000511081 ZFP91Q96JP5 570 aaPredicted RBP13.97□□□□□ -0.17
CLDND1-223ENST00000511081 PRUNE2Q8WUY3 3088 aa13.97□□□□□ -0.17
CLDND1-223ENST00000511081 UNC80Q8N2C7 3258 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 CNTNAP5Q8WYK1 1306 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 TMEM265A0A087WTH1 108 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 hCG_1642624A0A1W2PR95 340 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 FIBPO43427 364 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 NEFLP07196 543 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 CDC27P30260 824 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 PSEN2P49810 448 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 EVCP57679 992 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 RBL2Q08999 1139 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 NEDD9Q14511 834 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 RTN1Q16799 776 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 FAM47CQ5HY64 1035 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 GDF6Q6KF10 455 aaPredicted RBP13.96□□□□□ -0.17
CLDND1-223ENST00000511081 PPP1R13LQ8WUF5 828 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 GUCD1Q96NT3 240 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 C16orf70Q9BSU1 422 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 TTYH1Q9H313 450 aaPredicted RBP13.96□□□□□ -0.17
CLDND1-223ENST00000511081 PPP4R2Q9NY27 417 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 GTF2IRD1Q9UHL9 959 aa13.96□□□□□ -0.17
CLDND1-223ENST00000511081 V9GY48 417 aaPredicted RBP13.96□□□□□ -0.17
CLDND1-223ENST00000511081 TRANK1O15050 2925 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 TRIP12Q14669 1992 aaPredicted RBP13.95□□□□□ -0.18
CLDND1-223ENST00000511081 KLF18A0A0U1RQI7 1052 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 PFKMP08237 780 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 IQCF3P0C7M6 154 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 CPA1P15085 419 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 RPS6KB1P23443 525 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 ADD1P35611 737 aaKnown RBP13.95□□□□□ -0.18
CLDND1-223ENST00000511081 WWC2Q6AWC2 1192 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 TYW1BQ6NUM6 668 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 METTL7BQ6UX53 244 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 Q6ZUG5 572 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 SCLYQ96I15 445 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 SPATA33Q96N06 139 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 JAKMIP1Q96N16 626 aaKnown RBP13.95□□□□□ -0.18
CLDND1-223ENST00000511081 KATNAL1Q9BW62 490 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 USP26Q9BXU7 913 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 MLXIPQ9HAP2 919 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 RTEL1Q9NZ71 1219 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 CXXC1Q9P0U4 656 aaPredicted RBP13.95□□□□□ -0.18
CLDND1-223ENST00000511081 HDAC6Q9UBN7 1215 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 UBIAD1Q9Y5Z9 338 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 NID2Q14112 1375 aa13.95□□□□□ -0.18
CLDND1-223ENST00000511081 hCG_1984214I3L0E3 225 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 MAFGO15525 162 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 HOXC8P31273 242 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 RFC2P35250 354 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 BFSP2Q13515 415 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 MFSD10Q14728 455 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 GPNMBQ14956 572 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 PTGISQ16647 500 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 KIAA0753Q2KHM9 967 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 ZNF697Q5TEC3 545 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 PPP1R18Q6NYC8 613 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 BLOC1S2Q6QNY1 142 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms