RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 GGPS1O95749 300 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 F2P00734 622 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 SUPT20HL2P0C7V6 817 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 ZNF286BP0CG31 522 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 MRPS9P82933 396 aaKnown RBP11.86□□□□□ -0.51
PFDN1-203ENST00000510217 PTPN11Q06124 597 aaPredicted RBP11.86□□□□□ -0.51
PFDN1-203ENST00000510217 SEMA3FQ13275 785 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 LAMC2Q13753 1193 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 KRT32Q14532 448 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 DGKDQ16760 1214 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 CELF3Q5SZQ8 465 aaKnown RBP11.86□□□□□ -0.51
PFDN1-203ENST00000510217 KCNV1Q6PIU1 500 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 ZNF365Q70YC5 407 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 DHX32Q7L7V1 743 aaKnown RBP11.86□□□□□ -0.51
PFDN1-203ENST00000510217 SESTD1Q86VW0 696 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 SCLYQ96I15 445 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 INPP4AQ96PE3 977 aaPredicted RBP11.86□□□□□ -0.51
PFDN1-203ENST00000510217 CTAGE1Q96RT6 745 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 TTYH1Q9H313 450 aaPredicted RBP11.86□□□□□ -0.51
PFDN1-203ENST00000510217 UPF2Q9HAU5 1272 aaKnown RBP11.86□□□□□ -0.51
PFDN1-203ENST00000510217 STXBP5LQ9Y2K9 1186 aa11.86□□□□□ -0.51
PFDN1-203ENST00000510217 HAS3O00219 553 aa11.85□□□□□ -0.51
PFDN1-203ENST00000510217 CPA1P15085 419 aa11.85□□□□□ -0.51
PFDN1-203ENST00000510217 HSPA4P34932 840 aa11.85□□□□□ -0.51
PFDN1-203ENST00000510217 FUT2Q10981 343 aa11.85□□□□□ -0.51
PFDN1-203ENST00000510217 HSDL1Q3SXM5 330 aa11.85□□□□□ -0.51
PFDN1-203ENST00000510217 MYSM1Q5VVJ2 828 aa11.85□□□□□ -0.51
PFDN1-203ENST00000510217 PCNX4Q63HM2 1172 aa11.85□□□□□ -0.51
PFDN1-203ENST00000510217 GDF6Q6KF10 455 aaPredicted RBP11.85□□□□□ -0.51
PFDN1-203ENST00000510217 DHX37Q8IY37 1157 aaKnown RBP11.85□□□□□ -0.51
PFDN1-203ENST00000510217 CCDC82Q8N4S0 544 aa11.85□□□□□ -0.51
PFDN1-203ENST00000510217 SMARCC2Q8TAQ2 1214 aa11.85□□□□□ -0.51
PFDN1-203ENST00000510217 HERVK_113Q902F9 699 aa11.85□□□□□ -0.51
PFDN1-203ENST00000510217 CUL5Q93034 780 aa11.85□□□□□ -0.51
PFDN1-203ENST00000510217 RBM28Q9NW13 759 aaKnown RBP11.85□□□□□ -0.51
PFDN1-203ENST00000510217 CXXC1Q9P0U4 656 aaPredicted RBP11.85□□□□□ -0.51
PFDN1-203ENST00000510217 NID2Q14112 1375 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 TMEM265A0A087WTH1 108 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 KLF18A0A0U1RQI7 1052 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-203ENST00000510217 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-203ENST00000510217 PITPNM1O00562 1244 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 ZBTB43O43298 467 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 STAM2O75886 525 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 TGFB3P10600 412 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 CASTP20810 708 aaKnown RBP11.84□□□□□ -0.51
PFDN1-203ENST00000510217 DNAJB2P25686 324 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 ICAM3P32942 547 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 PSEN2P49810 448 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 CHMP4BP1P59074 171 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 MFSD10Q14728 455 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 UBE2SQ16763 222 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 RTN1Q16799 776 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 WWC2Q6AWC2 1192 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 TYW1BQ6NUM6 668 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 HEATR3Q7Z4Q2 680 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-203ENST00000510217 DHX38Q92620 1227 aaKnown RBP11.84□□□□□ -0.51
PFDN1-203ENST00000510217 SPATA33Q96N06 139 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 KATNAL1Q9BW62 490 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 SEMA6BQ9H3T3 888 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 BCAS3Q9H6U6 928 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 FAM217BQ9NTX9 383 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-203ENST00000510217 GTF2IRD1Q9UHL9 959 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 SNX14Q9Y5W7 946 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 PTPRSQ13332 1948 aa11.84□□□□□ -0.51
PFDN1-203ENST00000510217 TRIP12Q14669 1992 aaPredicted RBP11.83□□□□□ -0.52
PFDN1-203ENST00000510217 GOLGA8AA7E2F4 631 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 GOLGA8BA8MQT2 603 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 GRXCR1A8MXD5 290 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 SPATA31C2B4DYI2 1134 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 FIBPO43427 364 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 HMGB1P09429 215 aaKnown RBP11.83□□□□□ -0.52
PFDN1-203ENST00000510217 CDC27P30260 824 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 DEKP35659 375 aaKnown RBP11.83□□□□□ -0.52
PFDN1-203ENST00000510217 PBX2P40425 430 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 RCAN1P53805 252 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 BECN1Q14457 450 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 PTGISQ16647 500 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 GNPTABQ3T906 1256 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 SYNE3Q6ZMZ3 975 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 OTOP2Q7RTS6 562 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 JAKMIP1Q96N16 626 aaKnown RBP11.83□□□□□ -0.52
PFDN1-203ENST00000510217 CDX2Q99626 313 aaPredicted RBP11.83□□□□□ -0.52
PFDN1-203ENST00000510217 C16orf70Q9BSU1 422 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 ALG1Q9BT22 464 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 PBX4Q9BYU1 374 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 PSTPIP2Q9H939 334 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 RTEL1Q9NZ71 1219 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 HDAC6Q9UBN7 1215 aa11.83□□□□□ -0.52
PFDN1-203ENST00000510217 REC8O95072 547 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 FGBP02675 491 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 LGALS2P05162 132 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 PFKMP08237 780 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 IQCF3P0C7M6 154 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 RBL2Q08999 1139 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 HIC1Q14526 733 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 KIAA0753Q2KHM9 967 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 XRRA1Q6P2D8 792 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 METTL7BQ6UX53 244 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms