RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 TMEM240Q5SV17 173 aa10.54□□□□□ -0.72
SPOCK1-207ENST00000509978 CDKAL1Q5VV42 579 aa10.54□□□□□ -0.72
SPOCK1-207ENST00000509978 CPNE8Q86YQ8 564 aa10.54□□□□□ -0.72
SPOCK1-207ENST00000509978 SMC5Q8IY18 1101 aa10.54□□□□□ -0.72
SPOCK1-207ENST00000509978 EXOC8Q8IYI6 725 aa10.54□□□□□ -0.72
SPOCK1-207ENST00000509978 Q8N1Y9 231 aa10.54□□□□□ -0.72
SPOCK1-207ENST00000509978 BOCQ9BWV1 1114 aa10.54□□□□□ -0.72
SPOCK1-207ENST00000509978 CDADC1Q9BWV3 514 aa10.54□□□□□ -0.72
SPOCK1-207ENST00000509978 ZNF700Q9H0M5 742 aa10.54□□□□□ -0.72
SPOCK1-207ENST00000509978 PNMA8BQ9ULN7 279 aaPredicted RBP10.54□□□□□ -0.72
SPOCK1-207ENST00000509978 LUC7L2Q9Y383 392 aaKnown RBP10.54□□□□□ -0.72
SPOCK1-207ENST00000509978 SMARCA4P51532 1647 aa10.54□□□□□ -0.72
SPOCK1-207ENST00000509978 TMEM82A0PJX8 343 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 ZNF561-AS1K7EIQ3 104 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 TGM5O43548 720 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 CFBP00751 764 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 MYBL2P10244 700 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 RBP3P10745 1247 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 RECQLP46063 649 aaPredicted RBP10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 PHC1P78364 1004 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 BIRC2Q13490 618 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 HDAC1Q13547 482 aaPredicted RBP10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 DDB1Q16531 1140 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 HDGFL2Q7Z4V5 671 aaPredicted RBP10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 SHISA5Q8N114 240 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 HSPA12BQ96MM6 686 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 SEMA3GQ9NS98 782 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 ZSWIM5Q9P217 1185 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 PPARGC1AQ9UBK2 798 aaKnown RBP10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 DUSP13Q9UII6 198 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 ANKRD6Q9Y2G4 727 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 SPO11Q9Y5K1 396 aa10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 BAZ1BQ9UIG0 1483 aaKnown RBP10.53□□□□□ -0.72
SPOCK1-207ENST00000509978 WASH4PA8MWX3 477 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 NPHS1O60500 1241 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 SNUPNO95149 360 aaKnown RBP10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 ZBTB48P10074 688 aaPredicted RBP10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 CCND1P24385 295 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 BCL6P41182 706 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 GPR19Q15760 415 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 HABP4Q5JVS0 413 aaKnown RBP10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 GPR158Q5T848 1215 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 RNF43Q68DV7 783 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 HHIPL2Q6UWX4 724 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 RASSF3Q86WH2 238 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 CPA6Q8N4T0 437 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 CISD2Q8N5K1 135 aaKnown RBP10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 C1orf162Q8NEQ5 155 aaPredicted RBP10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 UBE2FQ969M7 185 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 FAXDC2Q96IV6 333 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 RPS6KC1Q96S38 1066 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 METTL22Q9BUU2 404 aaPredicted RBP10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 IP6K2Q9UHH9 426 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 NOB1Q9ULX3 412 aaKnown RBP10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 SNX11Q9Y5W9 270 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 WASHC2AQ641Q2 1341 aa10.52□□□□□ -0.73
SPOCK1-207ENST00000509978 ARAP1Q96P48 1450 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 SLC12A8A0AV02 714 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 H7C1D1 291 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 F13BP05160 661 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 CEACAM5P06731 702 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 PDE6AP16499 860 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 IARSP41252 1262 aaKnown RBP10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 LAPTM5Q13571 262 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 TERF2Q15554 542 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 CPSF6Q16630 551 aaKnown RBP eCLIP10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 BROXQ5VW32 411 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 DGKHQ86XP1 1220 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 TMEM52Q8NDY8 209 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 DPF3Q92784 378 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 SLC39A13Q96H72 371 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 CLDND1Q9NY35 253 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 H2AFY2Q9P0M6 372 aaPredicted RBP10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 FBXL7Q9UJT9 491 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 U3KQE9 123 aa10.51□□□□□ -0.73
SPOCK1-207ENST00000509978 TRIM75PA6NK02 468 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 PRPF3O43395 683 aaKnown RBP10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 TEKQ02763 1124 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 HLA-DQA1Q5Y7H0 255 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 ARHGAP27Q6ZUM4 889 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 OSTM1Q86WC4 334 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 NAT16Q8N8M0 369 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 FBXO41Q8TF61 875 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 CHAMP1Q96JM3 812 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 MFSD14AQ96MC6 490 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 SMURF1Q9HCE7 757 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 ERVK13-1Q9NX77 482 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 PLAGL2Q9UPG8 496 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 ZNF652Q9Y2D9 606 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 GIT1Q9Y2X7 761 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 PCDHA11Q9Y5I1 949 aa10.5□□□□□ -0.73
SPOCK1-207ENST00000509978 WTIPA6NIX2 430 aaPredicted RBP10.49□□□□□ -0.73
SPOCK1-207ENST00000509978 H3BS24 57 aa10.49□□□□□ -0.73
SPOCK1-207ENST00000509978 FKTNO75072 461 aa10.49□□□□□ -0.73
SPOCK1-207ENST00000509978 LTKP29376 864 aa10.49□□□□□ -0.73
SPOCK1-207ENST00000509978 LSP1P33241 339 aa10.49□□□□□ -0.73
SPOCK1-207ENST00000509978 SMAD3P84022 425 aaKnown RBP10.49□□□□□ -0.73
SPOCK1-207ENST00000509978 SMAD2Q15796 467 aaKnown RBP10.49□□□□□ -0.73
SPOCK1-207ENST00000509978 FBXL6Q8N531 539 aa10.49□□□□□ -0.73
SPOCK1-207ENST00000509978 NLGN2Q8NFZ4 835 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms