RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 GLYCTKQ8IVS8 523 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 DRC7Q8IY82 874 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 NGEFQ8N5V2 710 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 RSPH1Q8WYR4 309 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 TSPAN17Q96FV3 270 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 ZNF512BQ96KM6 892 aaPredicted RBP5.49□□□□□ -1.53
NIPBL-206ENST00000509429 BCL2L13Q9BXK5 485 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 BCAS3Q9H6U6 928 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 IFT122Q9HBG6 1241 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 CORINQ9Y5Q5 1042 aa5.49□□□□□ -1.53
NIPBL-206ENST00000509429 H3BRB1 525 aa5.48□□□□□ -1.53
NIPBL-206ENST00000509429 ZNF205O95201 554 aa5.48□□□□□ -1.53
NIPBL-206ENST00000509429 RECKO95980 971 aa5.48□□□□□ -1.53
NIPBL-206ENST00000509429 CT47B1P0C2W7 299 aaPredicted RBP5.48□□□□□ -1.53
NIPBL-206ENST00000509429 CD53P19397 219 aa5.48□□□□□ -1.53
NIPBL-206ENST00000509429 FLT3P36888 993 aa5.48□□□□□ -1.53
NIPBL-206ENST00000509429 USP39Q53GS9 565 aaKnown RBP5.48□□□□□ -1.53
NIPBL-206ENST00000509429 CCDC174Q6PII3 467 aa5.48□□□□□ -1.53
NIPBL-206ENST00000509429 PCSK4Q6UW60 755 aa5.48□□□□□ -1.53
NIPBL-206ENST00000509429 ARHGEF18Q6ZSZ5 1173 aa5.48□□□□□ -1.53
NIPBL-206ENST00000509429 ANKRD13BQ86YJ7 626 aa5.48□□□□□ -1.53
NIPBL-206ENST00000509429 GIPC2Q8TF65 315 aa5.48□□□□□ -1.53
NIPBL-206ENST00000509429 ZNF764Q96H86 408 aaPredicted RBP5.48□□□□□ -1.53
NIPBL-206ENST00000509429 CDC5LQ99459 802 aaKnown RBP5.48□□□□□ -1.53
NIPBL-206ENST00000509429 C11orf84Q9BUA3 381 aaPredicted RBP5.48□□□□□ -1.53
NIPBL-206ENST00000509429 SEZ6LQ9BYH1 1024 aa5.48□□□□□ -1.53
NIPBL-206ENST00000509429 RANBP17Q9H2T7 1088 aaKnown RBP5.48□□□□□ -1.53
NIPBL-206ENST00000509429 TUT1Q9H6E5 874 aaKnown RBP5.48□□□□□ -1.53
NIPBL-206ENST00000509429 WASHC2CQ9Y4E1 1318 aa5.48□□□□□ -1.53
NIPBL-206ENST00000509429 NACADO15069 1562 aa5.47□□□□□ -1.53
NIPBL-206ENST00000509429 TGFB3P10600 412 aa5.47□□□□□ -1.53
NIPBL-206ENST00000509429 RNF4P78317 190 aa5.47□□□□□ -1.53
NIPBL-206ENST00000509429 POU5F1BQ06416 359 aa5.47□□□□□ -1.53
NIPBL-206ENST00000509429 DNTTIP2Q5QJE6 756 aaKnown RBP5.47□□□□□ -1.53
NIPBL-206ENST00000509429 HLA-DQA1Q5Y7H0 255 aa5.47□□□□□ -1.53
NIPBL-206ENST00000509429 PHLDB3Q6NSJ2 640 aa5.47□□□□□ -1.53
NIPBL-206ENST00000509429 NT5DC4Q86YG4 428 aa5.47□□□□□ -1.53
NIPBL-206ENST00000509429 JAMLQ86YT9 394 aa5.47□□□□□ -1.53
NIPBL-206ENST00000509429 NAP1L4Q99733 375 aaKnown RBP5.47□□□□□ -1.53
NIPBL-206ENST00000509429 GORASP1Q9BQQ3 440 aa5.47□□□□□ -1.53
NIPBL-206ENST00000509429 SPC25Q9HBM1 224 aa5.47□□□□□ -1.53
NIPBL-206ENST00000509429 AP5S1Q9NUS5 200 aa5.47□□□□□ -1.53
NIPBL-206ENST00000509429 DDX3XO00571 662 aaKnown RBP eCLIP5.46□□□□□ -1.54
NIPBL-206ENST00000509429 SIGLEC6O43699 453 aa5.46□□□□□ -1.54
NIPBL-206ENST00000509429 HMMRO75330 724 aa5.46□□□□□ -1.54
NIPBL-206ENST00000509429 CYP2C8P10632 490 aa5.46□□□□□ -1.54
NIPBL-206ENST00000509429 DAB2P98082 770 aa5.46□□□□□ -1.54
NIPBL-206ENST00000509429 RPL6Q02878 288 aaKnown RBP5.46□□□□□ -1.54
NIPBL-206ENST00000509429 SNW1Q13573 536 aaKnown RBP5.46□□□□□ -1.54
NIPBL-206ENST00000509429 C1QTNF12Q5T7M4 302 aa5.46□□□□□ -1.54
NIPBL-206ENST00000509429 IL17RAQ96F46 866 aa5.46□□□□□ -1.54
NIPBL-206ENST00000509429 PTPN18Q99952 460 aa5.46□□□□□ -1.54
NIPBL-206ENST00000509429 ARPC5LQ9BPX5 153 aa5.46□□□□□ -1.54
NIPBL-206ENST00000509429 CXorf56Q9H5V9 222 aa5.46□□□□□ -1.54
NIPBL-206ENST00000509429 PCDH18Q9HCL0 1135 aa5.46□□□□□ -1.54
NIPBL-206ENST00000509429 SFMBT1Q9UHJ3 866 aa5.46□□□□□ -1.54
NIPBL-206ENST00000509429 COL4A3BPQ9Y5P4 624 aa5.46□□□□□ -1.54
NIPBL-206ENST00000509429 RSF1Q96T23 1441 aaPredicted RBP5.46□□□□□ -1.54
NIPBL-206ENST00000509429 BAZ1AQ9NRL2 1556 aaPredicted RBP5.46□□□□□ -1.54
NIPBL-206ENST00000509429 PROB1E7EW31 1015 aa5.45□□□□□ -1.54
NIPBL-206ENST00000509429 PRC1O43663 620 aa5.45□□□□□ -1.54
NIPBL-206ENST00000509429 KIF20AO95235 890 aa5.45□□□□□ -1.54
NIPBL-206ENST00000509429 FAM163BP0C2L3 166 aa5.45□□□□□ -1.54
NIPBL-206ENST00000509429 COL6A1P12109 1028 aa5.45□□□□□ -1.54
NIPBL-206ENST00000509429 BMP8BP34820 402 aa5.45□□□□□ -1.54
NIPBL-206ENST00000509429 TNNT2P45379 298 aaPredicted RBP5.45□□□□□ -1.54
NIPBL-206ENST00000509429 DGCR2P98153 550 aa5.45□□□□□ -1.54
NIPBL-206ENST00000509429 DHX8Q14562 1220 aaKnown RBP5.45□□□□□ -1.54
NIPBL-206ENST00000509429 TCEAL1Q15170 157 aa5.45□□□□□ -1.54
NIPBL-206ENST00000509429 TSNAXIP1Q2TAA8 658 aa5.45□□□□□ -1.54
NIPBL-206ENST00000509429 ZSCAN30Q86W11 494 aa5.45□□□□□ -1.54
NIPBL-206ENST00000509429 KYQ8NBH2 561 aa5.45□□□□□ -1.54
NIPBL-206ENST00000509429 SVIPQ8NHG7 77 aa5.45□□□□□ -1.54
NIPBL-206ENST00000509429 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.45□□□□□ -1.54
NIPBL-206ENST00000509429 RETREG1Q9H6L5 497 aa5.45□□□□□ -1.54
NIPBL-206ENST00000509429 G3BP2Q9UN86 482 aaKnown RBP5.45□□□□□ -1.54
NIPBL-206ENST00000509429 S100BP04271 92 aaPredicted RBP5.44□□□□□ -1.54
NIPBL-206ENST00000509429 NEFHP12036 1026 aa5.44□□□□□ -1.54
NIPBL-206ENST00000509429 EIF4G1Q04637 1599 aaKnown RBP5.44□□□□□ -1.54
NIPBL-206ENST00000509429 CCDC144BQ3MJ40 725 aa5.44□□□□□ -1.54
NIPBL-206ENST00000509429 HSP90B2PQ58FF3 399 aa5.44□□□□□ -1.54
NIPBL-206ENST00000509429 L1TD1Q5T7N2 865 aaKnown RBP5.44□□□□□ -1.54
NIPBL-206ENST00000509429 KRT77Q7Z794 578 aa5.44□□□□□ -1.54
NIPBL-206ENST00000509429 VPS37AQ8NEZ2 397 aa5.44□□□□□ -1.54
NIPBL-206ENST00000509429 RUNDC1Q96C34 613 aa5.44□□□□□ -1.54
NIPBL-206ENST00000509429 CFAP53Q96M91 514 aa5.44□□□□□ -1.54
NIPBL-206ENST00000509429 BRIP1Q9BX63 1249 aa5.44□□□□□ -1.54
NIPBL-206ENST00000509429 LRRC27Q9C0I9 530 aa5.44□□□□□ -1.54
NIPBL-206ENST00000509429 SUDS3Q9H7L9 328 aaPredicted RBP5.44□□□□□ -1.54
NIPBL-206ENST00000509429 NOL7Q9UMY1 257 aaKnown RBP5.44□□□□□ -1.54
NIPBL-206ENST00000509429 MINPP1Q9UNW1 487 aa5.44□□□□□ -1.54
NIPBL-206ENST00000509429 HIP1RO75146 1068 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 LDHCP07864 332 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 VIL1P09327 827 aaKnown RBP5.43□□□□□ -1.54
NIPBL-206ENST00000509429 NAT1P18440 290 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 CASQ1P31415 396 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 ATICP31939 592 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 GBP1P32455 592 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 TERF1P54274 439 aa5.43□□□□□ -1.54
NIPBL-206ENST00000509429 EIF5P55010 431 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms