RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 GMPSP49915 693 aaPredicted RBP12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 STAT2P52630 851 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 ORC2Q13416 577 aaPredicted RBP12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 LONRF2Q1L5Z9 754 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 C9orf131Q5VYM1 1079 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 PPP4R3AQ6IN85 833 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 ZNF662Q6ZS27 426 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 FBXO11Q86XK2 927 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 MICALL2Q8IY33 904 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 NELFBQ8WX92 580 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 IQCDQ96DY2 449 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 CUEDC2Q9H467 287 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 DDX25Q9UHL0 483 aaKnown RBP12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 GJA3Q9Y6H8 435 aa12.28□□□□□ -0.44
SH3RF1-203ENST00000508685 CTAGE15A4D2H0 777 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 OPLAHO14841 1288 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 CTAGE8P0CG41 777 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 HOXA7P31268 230 aaPredicted RBP12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 ZNF280AP59817 542 aaPredicted RBP12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 TBC1D10BQ4KMP7 808 aaPredicted RBP12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 BTNL9Q6UXG8 535 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 CTAGE6Q86UF2 777 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 CTAGE4Q8IX94 777 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 RETREG2Q8NC44 543 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 HAS1Q92839 578 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 CCDC47Q96A33 483 aaKnown RBP12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 NUP58Q9BVL2 599 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 ACBD3Q9H3P7 528 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 THAP9Q9H5L6 903 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 HAUS4Q9H6D7 363 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 GOPCQ9HD26 462 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 KBTBD4Q9NVX7 518 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 LRWD1Q9UFC0 647 aa12.27□□□□□ -0.44
SH3RF1-203ENST00000508685 SEC31AO94979 1220 aaKnown RBP12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 LMNB1P20700 586 aa12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 OAS2P29728 719 aaKnown RBP12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 FXR1P51114 621 aaKnown RBP eCLIP12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 SAMD1Q6SPF0 538 aaPredicted RBP12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 EHBP1Q8NDI1 1231 aa12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 OR8K1Q8NGG5 319 aa12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 EXOC4Q96A65 974 aa12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 RPGRIP1Q96KN7 1286 aa12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 TEPSINQ96N21 525 aa12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 ANO3Q9BYT9 981 aa12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 RNF181Q9P0P0 153 aa12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 SYNPO2Q9UMS6 1093 aa12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 MAPK8IP1Q9UQF2 711 aa12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 GDAQ9Y2T3 454 aa12.27□□□□□ -0.45
SH3RF1-203ENST00000508685 HOXA13P31271 388 aaPredicted RBP12.26□□□□□ -0.45
SH3RF1-203ENST00000508685 KRT9P35527 623 aa12.26□□□□□ -0.45
SH3RF1-203ENST00000508685 KRT83P78385 493 aa12.26□□□□□ -0.45
SH3RF1-203ENST00000508685 ADSSL1Q8N142 457 aa12.26□□□□□ -0.45
SH3RF1-203ENST00000508685 DHTKD1Q96HY7 919 aaPredicted RBP12.26□□□□□ -0.45
SH3RF1-203ENST00000508685 ST7Q9NRC1 585 aa12.26□□□□□ -0.45
SH3RF1-203ENST00000508685 MAGEC2Q9UBF1 373 aaPredicted RBP12.26□□□□□ -0.45
SH3RF1-203ENST00000508685 EPN1Q9Y6I3 576 aaPredicted RBP12.26□□□□□ -0.45
SH3RF1-203ENST00000508685 SMCHD1A6NHR9 2005 aa12.26□□□□□ -0.45
SH3RF1-203ENST00000508685 ZNF541Q9H0D2 1346 aa12.26□□□□□ -0.45
SH3RF1-203ENST00000508685 LTBP3Q9NS15 1303 aa12.26□□□□□ -0.45
SH3RF1-203ENST00000508685 PHF20L1A8MW92 1017 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 FZD9O00144 591 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 PSMA7O14818 248 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 SASH3O75995 380 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 RPS12P25398 132 aaKnown RBP12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 CCT6AP40227 531 aaKnown RBP12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 MAP3K10Q02779 954 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 UBXN1Q04323 297 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 TMEM266Q2M3C6 531 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 FAM114A1Q8IWE2 563 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 SLC35F6Q8N357 371 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 ZNF784Q8NCA9 323 aaPredicted RBP12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 NUDT12Q9BQG2 462 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 GLT8D2Q9H1C3 349 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 VCPKMTQ9H867 229 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 FBXO28Q9NVF7 368 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 CNOT7Q9UIV1 285 aaKnown RBP12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 LUC7L2Q9Y383 392 aaKnown RBP12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 LGALS16A8MUM7 142 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 KLRC4O43908 158 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 ASNSP08243 561 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 DNM2P50570 870 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 GRB10Q13322 594 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 DGKZQ13574 1117 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 BEND6Q5SZJ8 279 aaPredicted RBP12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 CCDC174Q6PII3 467 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 MB21D1Q8N884 522 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 DNAJC7Q99615 494 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 VPS16Q9H269 839 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 ANKZF1Q9H8Y5 726 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 HACL1Q9UJ83 578 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 MYO6Q9UM54 1294 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 CAPN11Q9UMQ6 739 aa12.25□□□□□ -0.45
SH3RF1-203ENST00000508685 BICDL2A1A5D9 508 aa12.24□□□□□ -0.45
SH3RF1-203ENST00000508685 POLR3GO15318 223 aaPredicted RBP12.24□□□□□ -0.45
SH3RF1-203ENST00000508685 RHOBTB3O94955 611 aa12.24□□□□□ -0.45
SH3RF1-203ENST00000508685 NDUFA10O95299 355 aa12.24□□□□□ -0.45
SH3RF1-203ENST00000508685 GCFC2P16383 781 aaKnown RBP12.24□□□□□ -0.45
SH3RF1-203ENST00000508685 ARHGAP25P42331 645 aa12.24□□□□□ -0.45
SH3RF1-203ENST00000508685 PRCPP42785 496 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms