RNA–Protein interactions for RNA: ENST00000508682.5

RACK1-219, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-219ENST00000508682 STXBP3O00186 592 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 ZBTB43O43298 467 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 GGPS1O95749 300 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 GH1P01241 217 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 ITGB5P18084 799 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 CASTP20810 708 aaKnown RBP11.25□□□□□ -0.61
RACK1-219ENST00000508682 KIF5BP33176 963 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 FPGSQ05932 587 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 GPNMBQ14956 572 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 PKN1Q16512 942 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 RTN1Q16799 776 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 FAM47CQ5HY64 1035 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 RNF20Q5VTR2 975 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 GDF6Q6KF10 455 aaPredicted RBP11.25□□□□□ -0.61
RACK1-219ENST00000508682 TRIM50Q86XT4 487 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 MTG1Q9BT17 334 aaPredicted RBP11.25□□□□□ -0.61
RACK1-219ENST00000508682 MTA3Q9BTC8 594 aa11.25□□□□□ -0.61
RACK1-219ENST00000508682 REV3LO60673 3130 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 DOCK5Q9H7D0 1870 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 LOC102724159A0A0B4J2E5 919 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 PBX2P40425 430 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 CPT1AP50416 773 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 CCT2P78371 535 aaKnown RBP11.24□□□□□ -0.61
RACK1-219ENST00000508682 SP4Q02446 784 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 PWP2Q15269 919 aaKnown RBP11.24□□□□□ -0.61
RACK1-219ENST00000508682 TMEM240Q5SV17 173 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 CELF3Q5SZQ8 465 aaKnown RBP11.24□□□□□ -0.61
RACK1-219ENST00000508682 MYSM1Q5VVJ2 828 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 MFSD5Q6N075 450 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 ZNF365Q70YC5 407 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 TMTC2Q8N394 836 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 ZBTB10Q96DT7 871 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 ALG1Q9BT22 464 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 TTYH1Q9H313 450 aaPredicted RBP11.24□□□□□ -0.61
RACK1-219ENST00000508682 HIPK3Q9H422 1215 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 PSTPIP2Q9H939 334 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 HDAC6Q9UBN7 1215 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 KIAA1217Q5T5P2 1943 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 SCN10AQ9Y5Y9 1956 aa11.24□□□□□ -0.61
RACK1-219ENST00000508682 SPATA31C2B4DYI2 1134 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 EDIL3O43854 480 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 SMARCA1P28370 1054 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 CCND2P30279 289 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 NTRK3Q16288 839 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 TJAP1Q5JTD0 557 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 BLOC1S2Q6QNY1 142 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 CYFIP1Q7L576 1253 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 DHX37Q8IY37 1157 aaKnown RBP11.23□□□□□ -0.61
RACK1-219ENST00000508682 SMARCC2Q8TAQ2 1214 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 RASGRP4Q8TDF6 673 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 RNPC3Q96LT9 517 aaKnown RBP11.23□□□□□ -0.61
RACK1-219ENST00000508682 SPATA33Q96N06 139 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 AIFM3Q96NN9 605 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 INPP4AQ96PE3 977 aaPredicted RBP11.23□□□□□ -0.61
RACK1-219ENST00000508682 C16orf70Q9BSU1 422 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 AGXT2Q9BYV1 514 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 SEC63Q9UGP8 760 aaKnown RBP11.23□□□□□ -0.61
RACK1-219ENST00000508682 PCDHA6Q9UN73 950 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 PCDHA8Q9Y5H6 950 aa11.23□□□□□ -0.61
RACK1-219ENST00000508682 HAS3O00219 553 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 PIK3CDO00329 1044 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 NKRFO15226 690 aaKnown RBP eCLIP11.22□□□□□ -0.61
RACK1-219ENST00000508682 ZEB2O60315 1214 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 CABYRO75952 493 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 CALM1P0DP23 149 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 CALM2P0DP24 149 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 CALM3P0DP25 149 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 MYOGP15173 224 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 PDIA3P30101 505 aaKnown RBP11.22□□□□□ -0.61
RACK1-219ENST00000508682 PSEN2P49810 448 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 GNAQP50148 359 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 METAP2P50579 478 aaKnown RBP eCLIP11.22□□□□□ -0.611e-10■■■□□ 19.1
RACK1-219ENST00000508682 STK3Q13188 491 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 SCN5AQ14524 2016 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 KRT32Q14532 448 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 TMCO2Q7Z6W1 182 aaPredicted RBP11.22□□□□□ -0.61
RACK1-219ENST00000508682 DEFB128Q7Z7B8 93 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 CDX2Q99626 313 aaPredicted RBP11.22□□□□□ -0.61
RACK1-219ENST00000508682 LZTS2Q9BRK4 669 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 ZSWIM6Q9HCJ5 1215 aa11.22□□□□□ -0.61
RACK1-219ENST00000508682 ARHGEF15O94989 841 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 ARP10275 920 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 HOXD8P13378 290 aaPredicted RBP11.21□□□□□ -0.61
RACK1-219ENST00000508682 RABGGTBP53611 331 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 NAPAP54920 295 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 MFSD10Q14728 455 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 KIAA0753Q2KHM9 967 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 TRIM71Q2Q1W2 868 aaKnown RBP11.21□□□□□ -0.61
RACK1-219ENST00000508682 UTP14CQ5TAP6 766 aaKnown RBP11.21□□□□□ -0.61
RACK1-219ENST00000508682 RASIP1Q5U651 963 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 JAKMIP3Q5VZ66 844 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 PCNX4Q63HM2 1172 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 TRAF7Q6Q0C0 670 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 RUFY3Q7L099 469 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 OTOP2Q7RTS6 562 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 SPRED2Q7Z698 418 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 PPTC7Q8NI37 304 aa11.21□□□□□ -0.61
RACK1-219ENST00000508682 EMID1Q96A84 441 aaPredicted RBP11.21□□□□□ -0.61
RACK1-219ENST00000508682 GPR20Q99678 358 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms