RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 DDX11Q96FC9 970 aa4.86□□□□□ -1.63
AC008539.1-201ENST00000507653 C11orf21Q9P2W6 132 aa4.86□□□□□ -1.63
AC008539.1-201ENST00000507653 ING1Q9UK53 422 aaPredicted RBP4.86□□□□□ -1.63
AC008539.1-201ENST00000507653 DUSP10Q9Y6W6 482 aa4.86□□□□□ -1.63
AC008539.1-201ENST00000507653 C7orf72A4D263 438 aa4.85□□□□□ -1.63
AC008539.1-201ENST00000507653 CYP2C8P10632 490 aa4.85□□□□□ -1.63
AC008539.1-201ENST00000507653 PLS3P13797 630 aa4.85□□□□□ -1.63
AC008539.1-201ENST00000507653 SARSP49591 514 aaKnown RBP4.85□□□□□ -1.63
AC008539.1-201ENST00000507653 PPP2R2AP63151 447 aa4.85□□□□□ -1.63
AC008539.1-201ENST00000507653 KIAA2012Q0VF49 1180 aa4.85□□□□□ -1.63
AC008539.1-201ENST00000507653 NT5DC1Q5TFE4 455 aa4.85□□□□□ -1.63
AC008539.1-201ENST00000507653 ZC3H18Q86VM9 953 aaKnown RBP4.85□□□□□ -1.63
AC008539.1-201ENST00000507653 JMYQ8N9B5 988 aa4.85□□□□□ -1.63
AC008539.1-201ENST00000507653 BTN2A2Q8WVV5 523 aa4.85□□□□□ -1.63
AC008539.1-201ENST00000507653 LRP2BPQ9P2M1 347 aa4.85□□□□□ -1.63
AC008539.1-201ENST00000507653 TBX1O43435 398 aa4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 FBLN1P23142 703 aa4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 LTBRP36941 435 aa4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 SLC6A11P48066 632 aa4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 CACNB2Q08289 660 aaPredicted RBP4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 RASA3Q14644 834 aa4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 WWC2Q6AWC2 1192 aa4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 BORAQ6PGQ7 559 aa4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 DPH6Q7L8W6 267 aa4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 CARFQ8N187 725 aa4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 TTC9BQ8N6N2 239 aa4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 KCTD13Q8WZ19 329 aa4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 ZFYVE21Q9BQ24 234 aa4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 AARSD1Q9BTE6 412 aaKnown RBP4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 X6R8D5 127 aa4.84□□□□□ -1.63
AC008539.1-201ENST00000507653 H7BY64 318 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 MEFVO15553 781 aaPredicted RBP4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 SNRPB2P08579 225 aaKnown RBP4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 ATF2P15336 505 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 PMLP29590 882 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 HTRA3P83110 453 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 VWA3BQ502W6 1294 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 MROH9Q5TGP6 573 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 MBLAC2Q68D91 279 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 USP51Q70EK9 711 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 TTLL6Q8N841 843 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 PLEKHO2Q8TD55 490 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 SH3RF3Q8TEJ3 882 aaPredicted RBP4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 DIO2Q92813 273 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 SPATA25Q9BR10 227 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 ARHGEF4Q9NR80 690 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 ST7Q9NRC1 585 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 GPR27Q9NS67 375 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 CLEC1BQ9P126 229 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 RWDD3Q9Y3V2 267 aa4.83□□□□□ -1.64
AC008539.1-201ENST00000507653 ARNTLO00327 626 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 MYO1BO43795 1136 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 DLX3O60479 287 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 PPP1R11O60927 126 aaPredicted RBP4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 CNR2P34972 360 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 GTF2F1P35269 517 aaKnown RBP eCLIP4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 ATXN1P54253 815 aaKnown RBP4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 RPL11P62913 178 aaKnown RBP4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 CHRNA2Q15822 529 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 SMN1Q16637 294 aaKnown RBP4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 ETV3LQ6ZN32 361 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 NPM2Q86SE8 214 aaKnown RBP4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 CCDC103Q8IW40 242 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 TMEM145Q8NBT3 493 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 SMARCC2Q8TAQ2 1214 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 DPF3Q92784 378 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 PPP1R14AQ96A00 147 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 ZBTB8AQ96BR9 441 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 SAMD11Q96NU1 681 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 YIPF4Q9BSR8 244 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 ZNF747Q9BV97 191 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 SPATA9Q9BWV2 254 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 PDGFDQ9GZP0 370 aaPredicted RBP4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 GPRC5CQ9NQ84 441 aa4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 TIMM13Q9Y5L4 95 aaPredicted RBP4.82□□□□□ -1.64
AC008539.1-201ENST00000507653 TRAV20A0A0B4J274 112 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 ADCY3O60266 1144 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 CYP7B1O75881 506 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 PLA2G1BP04054 148 aaKnown RBP4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 SURF1Q15526 300 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 INF2Q27J81 1249 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 DENND5AQ6IQ26 1287 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 STYK1Q6J9G0 422 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 CPNE8Q86YQ8 564 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 SCUBE1Q8IWY4 988 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 PPIL6Q8IXY8 311 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 LGI4Q8N135 537 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 ZBTB38Q8NAP3 1195 aaPredicted RBP4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 DCAF4Q8WV16 495 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 SEC14L1Q92503 715 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 UBXN4Q92575 508 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 OSBP2Q969R2 916 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 DRC1Q96MC2 740 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 IER2Q9BTL4 223 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 GULP1Q9UBP9 304 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 PLA2G2DQ9UNK4 145 aa4.81□□□□□ -1.64
AC008539.1-201ENST00000507653 CCDC163A0A0D9SF12 145 aa4.8□□□□□ -1.64
AC008539.1-201ENST00000507653 FUCA1P04066 466 aa4.8□□□□□ -1.64
AC008539.1-201ENST00000507653 PABPC1P11940 636 aaKnown RBP4.8□□□□□ -1.64
AC008539.1-201ENST00000507653 ECI1P42126 302 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms