RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	ZNF132	P52740	706 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	ARPC4	P59998	168 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	MPP3	Q13368	585 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	TRIM29	Q14134	588 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	MAP7	Q14244	749 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	ENOX2	Q16206	610 aa	Known RBP	5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316		Q4G0T1	1027 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	AKAP4	Q5JQC9	854 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	CEP85L	Q5SZL2	805 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	CCDC183	Q5T5S1	534 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	LARP1B	Q659C4	914 aa	Known RBP	5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	IQCE	Q6IPM2	695 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	PAOX	Q6QHF9	649 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	CRELD2	Q6UXH1	353 aa	Predicted RBP	5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	HDX	Q7Z353	690 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	ARMC9	Q7Z3E5	817 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	ARHGEF25	Q86VW2	580 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	SMG8	Q8ND04	991 aa	Known RBP	5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	PPP1R14C	Q8TAE6	165 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	TRPC4AP	Q8TEL6	797 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	FBLIM1	Q8WUP2	373 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	TMEM40	Q8WWA1	233 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	GTF3C6	Q969F1	213 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	ZKSCAN4	Q969J2	545 aa	Predicted RBP	5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	SPDL1	Q96EA4	605 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	MAML3	Q96JK9	1138 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	TCF12	Q99081	682 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	OSBPL1A	Q9BXW6	950 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	BRD8	Q9H0E9	1235 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	ACTR5	Q9H9F9	607 aa	Predicted RBP	5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	PAPOLB	Q9NRJ5	636 aa	Known RBP	5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	IFT57	Q9NWB7	429 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	FBXO9	Q9UK97	447 aa	Predicted RBP	5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	CROT	Q9UKG9	612 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	ZNF215	Q9UL58	517 aa	Predicted RBP	5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	WWC3	Q9ULE0	1092 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	ITM2B	Q9Y287	266 aa		5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	ZNF644	Q9H582	1327 aa	Predicted RBP	5.71	□□□□□ -1.5
TUSC3-205	ENST00000507316	RTL1	A6NKG5	1358 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	KAT6B	Q8WYB5	2073 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	PRDM15	P57071	1507 aa	Predicted RBP	5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	KDM5B	Q9UGL1	1544 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	SYCE3	A1L190	88 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	LSM1	O15116	133 aa	Known RBP	5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	PRC1	O43663	620 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	CLASP2	O75122	1294 aa	Known RBP	5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	MME	P08473	750 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	RAB6A	P20340	208 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	CCNC	P24863	283 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	RANBP1	P43487	201 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	AMPH	P49418	695 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	MCM2	P49736	904 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	GSDMD	P57764	484 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	TUBA1B	P68363	451 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	PHEX	P78562	749 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	MRPS25	P82663	173 aa	Known RBP	5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	ADCY1	Q08828	1119 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	ZBTB17	Q13105	803 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	SEPT6	Q14141	434 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	EIF4A2	Q14240	407 aa	Known RBP	5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	NAA25	Q14CX7	972 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	E2F5	Q15329	346 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	ELF2	Q15723	593 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	SNCB	Q16143	134 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	ZNF423	Q2M1K9	1284 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	CCDC184	Q52MB2	194 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	EAPP	Q56P03	285 aa	Predicted RBP	5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	CCDC70	Q6NSX1	233 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	TUBA1A	Q71U36	451 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	PARD3B	Q8TEW8	1205 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	NACC2	Q96BF6	587 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	SMC6	Q96SB8	1091 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	TSC22D3	Q99576	134 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	GORASP1	Q9BQQ3	440 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	PAGR1	Q9BTK6	254 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	EIF2A	Q9BY44	585 aa	Known RBP	5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	TTC12	Q9H892	705 aa	Predicted RBP	5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	VIPAS39	Q9H9C1	493 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	SUGCT	Q9HAC7	445 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	ZFYVE1	Q9HBF4	777 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	AP4E1	Q9UPM8	1137 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	ZNF652	Q9Y2D9	606 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	TTLL3	Q9Y4R7	772 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	TTC41P	Q6P2S7	1318 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	PHLPP2	Q6ZVD8	1323 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	ATP10A	O60312	1499 aa		5.7	□□□□□ -1.5
TUSC3-205	ENST00000507316	KIF21A	Q7Z4S6	1674 aa		5.69	□□□□□ -1.5
TUSC3-205	ENST00000507316	SYNM	O15061	1565 aa		5.69	□□□□□ -1.5
TUSC3-205	ENST00000507316	SPATA31E1	Q6ZUB1	1445 aa		5.69	□□□□□ -1.5
TUSC3-205	ENST00000507316	TBKBP1	A7MCY6	615 aa		5.69	□□□□□ -1.5
TUSC3-205	ENST00000507316	EIF1AY	O14602	144 aa	Known RBP	5.69	□□□□□ -1.5
TUSC3-205	ENST00000507316	ZSCAN12	O43309	604 aa		5.69	□□□□□ -1.5
TUSC3-205	ENST00000507316	ZEB2	O60315	1214 aa		5.69	□□□□□ -1.5
TUSC3-205	ENST00000507316	MGEA5	O60502	916 aa		5.69	□□□□□ -1.5
TUSC3-205	ENST00000507316	TBCA	O75347	108 aa	Known RBP	5.69	□□□□□ -1.5
TUSC3-205	ENST00000507316	TIAF1	O95411	115 aa		5.69	□□□□□ -1.5
TUSC3-205	ENST00000507316	EIF2S1	P05198	315 aa	Known RBP	5.69	□□□□□ -1.5
TUSC3-205	ENST00000507316	BDNF	P23560	247 aa		5.69	□□□□□ -1.5
TUSC3-205	ENST00000507316	SMARCA1	P28370	1054 aa		5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms