RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 C11orf16Q9NQ32 467 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 SCN10AQ9Y5Y9 1956 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 RBM47A0AV96 593 aaKnown RBP6.77□□□□□ -1.33
GYPB-208ENST00000507009 LINC01553A4QN01 128 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 A6NJR5 290 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 NKRFO15226 690 aaKnown RBP eCLIP6.77□□□□□ -1.33
GYPB-208ENST00000507009 KPNA6O60684 536 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 PLA2G6O60733 806 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 GPR37L1O60883 481 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 BAIAP3O94812 1187 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 MMP3P08254 477 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 ZNF286BP0CG31 522 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 GOLGA8HP0CJ92 632 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 SELPP16109 830 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 ZMYM1Q5SVZ6 1142 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 VPS53Q5VIR6 699 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 PTCRAQ6ISU1 281 aaPredicted RBP6.77□□□□□ -1.33
GYPB-208ENST00000507009 CNKSR3Q6P9H4 555 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 LAPTM4BQ86VI4 370 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 GJD3Q8N144 294 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 C7orf31Q8N865 590 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 OTUD7AQ8TE49 926 aaPredicted RBP6.77□□□□□ -1.33
GYPB-208ENST00000507009 AFAP1L1Q8TED9 768 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 CLEC4DQ8WXI8 215 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 DHX38Q92620 1227 aaKnown RBP6.77□□□□□ -1.33
GYPB-208ENST00000507009 TGS1Q96RS0 853 aaKnown RBP6.77□□□□□ -1.33
GYPB-208ENST00000507009 TMEM47Q9BQJ4 181 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 C17orf80Q9BSJ5 609 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 CPVLQ9H3G5 476 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 SUGCTQ9HAC7 445 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 HDAC6Q9UBN7 1215 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.77□□□□□ -1.33
GYPB-208ENST00000507009 SIP14410 1827 aa6.77□□□□□ -1.33
GYPB-208ENST00000507009 TRIM6-TRIM34B2RNG4 842 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 B4DLN1 442 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 PI4K2BG5E9Z4 385 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 DHX16O60231 1041 aaKnown RBP6.76□□□□□ -1.33
GYPB-208ENST00000507009 NBNO60934 754 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 UPP2O95045 317 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 GH1P01241 217 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 TOP1P11387 765 aaKnown RBP6.76□□□□□ -1.33
GYPB-208ENST00000507009 CKBP12277 381 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 EIF2AK2P19525 551 aaKnown RBP6.76□□□□□ -1.33
GYPB-208ENST00000507009 MRPL12P52815 198 aaKnown RBP6.76□□□□□ -1.33
GYPB-208ENST00000507009 HAND2P61296 217 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 ZNF200P98182 395 aaPredicted RBP6.76□□□□□ -1.33
GYPB-208ENST00000507009 PTPN11Q06124 597 aaPredicted RBP6.76□□□□□ -1.33
GYPB-208ENST00000507009 IKBKEQ14164 716 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 NBR1Q14596 966 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 CLUL1Q15846 466 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 ZNF618Q5T7W0 954 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.76□□□□□ -1.33
GYPB-208ENST00000507009 FAM178BQ8IXR5 827 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 DHX37Q8IY37 1157 aaKnown RBP6.76□□□□□ -1.33
GYPB-208ENST00000507009 MYOCDQ8IZQ8 938 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.76□□□□□ -1.33
GYPB-208ENST00000507009 CAGE1Q8TC20 777 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 TBC1D5Q92609 795 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 ZFRQ96KR1 1074 aaKnown RBP6.76□□□□□ -1.33
GYPB-208ENST00000507009 RAD9AQ99638 391 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 ZKSCAN3Q9BRR0 538 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 UBA5Q9GZZ9 404 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 SEPT9Q9UHD8 586 aaPredicted RBP6.76□□□□□ -1.33
GYPB-208ENST00000507009 RCAN3Q9UKA8 241 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 MYH7BA7E2Y1 1941 aa6.76□□□□□ -1.33
GYPB-208ENST00000507009 PRR33A8MZF0 331 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 FOXP2O15409 715 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 GJB5O95377 273 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 AMHP03971 560 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 PDHBP11177 359 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 CASTP20810 708 aaKnown RBP6.75□□□□□ -1.33
GYPB-208ENST00000507009 MRE11P49959 708 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 ERVK-21P61565 698 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 ARHGAP1Q07960 439 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 ZNF543Q08ER8 600 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 GPNMBQ14956 572 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 DGKDQ16760 1214 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 LEXMQ3ZCV2 418 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 ARHGEF16Q5VV41 709 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 BTNL9Q6UXG8 535 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 DNERQ8NFT8 737 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 PI4K2BQ8TCG2 481 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 KAT2BQ92831 832 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 WNT8BQ93098 351 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 TAAR1Q96RJ0 339 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 CTAGE1Q96RT6 745 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 YME1L1Q96TA2 773 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 VAT1LQ9HCJ6 419 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 MRVI1Q9Y6F6 885 aa6.75□□□□□ -1.33
GYPB-208ENST00000507009 MYH6P13533 1939 aa6.74□□□□□ -1.33
GYPB-208ENST00000507009 KIAA1217Q5T5P2 1943 aa6.74□□□□□ -1.33
GYPB-208ENST00000507009 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.74□□□□□ -1.33
GYPB-208ENST00000507009 LOC102724159A0A0B4J2E5 919 aa6.74□□□□□ -1.33
GYPB-208ENST00000507009 ABHD14A-ACY1A0A1B0GW23 586 aa6.74□□□□□ -1.33
GYPB-208ENST00000507009 ORC4O43929 436 aa6.74□□□□□ -1.33
GYPB-208ENST00000507009 LGR5O75473 907 aa6.74□□□□□ -1.33
GYPB-208ENST00000507009 CFBP00751 764 aa6.74□□□□□ -1.33
GYPB-208ENST00000507009 CTSHP09668 335 aa6.74□□□□□ -1.33
GYPB-208ENST00000507009 MYCLP12524 364 aaPredicted RBP6.74□□□□□ -1.33
GYPB-208ENST00000507009 ALADP13716 330 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms