RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 LRRC27Q9C0I9 530 aa20.75■□□□□ 0.91
SMN2-206ENST00000506734 PPP1R3GB7ZBB8 358 aa20.74■□□□□ 0.91
SMN2-206ENST00000506734 PSMD10O75832 226 aa20.74■□□□□ 0.91
SMN2-206ENST00000506734 STAT3P40763 770 aa20.74■□□□□ 0.91
SMN2-206ENST00000506734 FMR1Q06787 632 aaKnown RBP eCLIP20.74■□□□□ 0.91
SMN2-206ENST00000506734 KCTD17Q8N5Z5 321 aa20.74■□□□□ 0.91
SMN2-206ENST00000506734 MB21D1Q8N884 522 aa20.74■□□□□ 0.91
SMN2-206ENST00000506734 CD44P16070 742 aaKnown RBP20.73■□□□□ 0.91
SMN2-206ENST00000506734 RPA1P27694 616 aa20.73■□□□□ 0.91
SMN2-206ENST00000506734 PPP2R5CQ13362 524 aa20.73■□□□□ 0.91
SMN2-206ENST00000506734 MCM6Q14566 821 aa20.73■□□□□ 0.91
SMN2-206ENST00000506734 KMT5BQ4FZB7 885 aa20.73■□□□□ 0.91
SMN2-206ENST00000506734 LBX2Q6XYB7 198 aa20.73■□□□□ 0.91
SMN2-206ENST00000506734 KCNK18Q7Z418 384 aa20.73■□□□□ 0.91
SMN2-206ENST00000506734 TAAR1Q96RJ0 339 aa20.73■□□□□ 0.91
SMN2-206ENST00000506734 UBIAD1Q9Y5Z9 338 aa20.73■□□□□ 0.91
SMN2-206ENST00000506734 LRCH2Q5VUJ6 765 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 NCAPH2Q6IBW4 605 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 XRRA1Q6P2D8 792 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 NSMFQ6X4W1 530 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 GADL1Q6ZQY3 521 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 OTOP1Q7RTM1 612 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 IL31RAQ8NI17 732 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 CCDC47Q96A33 483 aaKnown RBP20.72■□□□□ 0.91
SMN2-206ENST00000506734 UIMC1Q96RL1 719 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 MED15Q96RN5 788 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 ACAD9Q9H845 621 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 PXMP2Q9NR77 195 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 CLEC11AQ9Y240 323 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 PVALEFA0A1B0GWK0 134 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 MED24O75448 989 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 POTEIP0CG38 1075 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 POTEJP0CG39 1038 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 ITGB5P18084 799 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 BAATQ14032 418 aaPredicted RBP20.72■□□□□ 0.91
SMN2-206ENST00000506734 PGM5Q15124 567 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 OPTNQ96CV9 577 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 RIT2Q99578 217 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 PDCD2LQ9BRP1 358 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 ZNF577Q9BSK1 485 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 POLR3CQ9BUI4 534 aaPredicted RBP20.72■□□□□ 0.91
SMN2-206ENST00000506734 WDR11Q9BZH6 1224 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 AGTPBP1Q9UPW5 1226 aa20.72■□□□□ 0.91
SMN2-206ENST00000506734 POTEB3A0JP26 581 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 MYMKA6NI61 221 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 PTMAP06454 111 aaKnown RBP20.71■□□□□ 0.91
SMN2-206ENST00000506734 ARP10275 920 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 ASIC1P78348 528 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 MRPS9P82933 396 aaKnown RBP20.71■□□□□ 0.91
SMN2-206ENST00000506734 MOGSQ13724 837 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 POTEBQ6S5H4 581 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 B3GNT9Q6UX72 402 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 CATSPER3Q86XQ3 398 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 SMYD4Q8IYR2 804 aaPredicted RBP20.71■□□□□ 0.91
SMN2-206ENST00000506734 GIMAP8Q8ND71 665 aaPredicted RBP20.71■□□□□ 0.91
SMN2-206ENST00000506734 CHST13Q8NET6 341 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 RMDN3Q96TC7 470 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 JADE2Q9NQC1 790 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 FANCLQ9NW38 375 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.71■□□□□ 0.91
SMN2-206ENST00000506734 KIAA1024Q9UPX6 916 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 NFE2L3Q9Y4A8 694 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 SYNRGQ9UMZ2 1314 aa20.71■□□□□ 0.91
SMN2-206ENST00000506734 GAS7O60861 476 aa20.7■□□□□ 0.9
SMN2-206ENST00000506734 SPATA31C1P0DKV0 1188 aa20.7■□□□□ 0.9
SMN2-206ENST00000506734 ZNF18P17022 549 aa20.7■□□□□ 0.9
SMN2-206ENST00000506734 COBLL1Q53SF7 1204 aa20.7■□□□□ 0.9
SMN2-206ENST00000506734 SPATA1Q5VX52 437 aa20.7■□□□□ 0.9
SMN2-206ENST00000506734 MAP1SQ66K74 1059 aaPredicted RBP20.7■□□□□ 0.9
SMN2-206ENST00000506734 POTEEQ6S8J3 1075 aa20.7■□□□□ 0.9
SMN2-206ENST00000506734 EXOC1Q9NV70 894 aa20.7■□□□□ 0.9
SMN2-206ENST00000506734 CYP39A1Q9NYL5 469 aa20.7■□□□□ 0.9
SMN2-206ENST00000506734 GOLGA6L6A8MZA4 724 aa20.69■□□□□ 0.9
SMN2-206ENST00000506734 IPO5O00410 1097 aaKnown RBP20.69■□□□□ 0.9
SMN2-206ENST00000506734 EIF2AK2P19525 551 aaKnown RBP20.69■□□□□ 0.9
SMN2-206ENST00000506734 MUTP22033 750 aa20.69■□□□□ 0.9
SMN2-206ENST00000506734 IRX3P78415 501 aaPredicted RBP20.69■□□□□ 0.9
SMN2-206ENST00000506734 ARHGEF16Q5VV41 709 aa20.69■□□□□ 0.9
SMN2-206ENST00000506734 UNC13DQ70J99 1090 aa20.69■□□□□ 0.9
SMN2-206ENST00000506734 FASTKD5Q7L8L6 764 aaKnown RBP20.69■□□□□ 0.9
SMN2-206ENST00000506734 TRMT44Q8IYL2 757 aaKnown RBP20.69■□□□□ 0.9
SMN2-206ENST00000506734 ADSSL1Q8N142 457 aa20.69■□□□□ 0.9
SMN2-206ENST00000506734 EIF2AK1Q9BQI3 630 aaKnown RBP20.69■□□□□ 0.9
SMN2-206ENST00000506734 TEKT3Q9BXF9 490 aa20.69■□□□□ 0.9
SMN2-206ENST00000506734 TUFT1Q9NNX1 390 aa20.69■□□□□ 0.9
SMN2-206ENST00000506734 A1CFQ9NQ94 594 aaKnown RBP20.69■□□□□ 0.9
SMN2-206ENST00000506734 KCNH7Q9NS40 1196 aa20.69■□□□□ 0.9
SMN2-206ENST00000506734 RWDD2AQ9UIY3 292 aa20.69■□□□□ 0.9
SMN2-206ENST00000506734 GDAQ9Y2T3 454 aa20.69■□□□□ 0.9
SMN2-206ENST00000506734 EML1O00423 815 aa20.68■□□□□ 0.9
SMN2-206ENST00000506734 PPP1R2P41236 205 aa20.68■□□□□ 0.9
SMN2-206ENST00000506734 FKBP1BP68106 108 aa20.68■□□□□ 0.9
SMN2-206ENST00000506734 FANCCQ00597 558 aa20.68■□□□□ 0.9
SMN2-206ENST00000506734 PAK1Q13153 545 aa20.68■□□□□ 0.9
SMN2-206ENST00000506734 DHX8Q14562 1220 aaKnown RBP20.68■□□□□ 0.9
SMN2-206ENST00000506734 RIOX2Q8IUF8 465 aa20.68■□□□□ 0.9
SMN2-206ENST00000506734 HSD17B14Q9BPX1 270 aa20.68■□□□□ 0.9
SMN2-206ENST00000506734 ASCC2Q9H1I8 757 aaPredicted RBP20.68■□□□□ 0.9
SMN2-206ENST00000506734 POTEFA5A3E0 1075 aa20.68■□□□□ 0.9
SMN2-206ENST00000506734 E9PMD0 336 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms