RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CBX4O00257 560 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 TRAF5O00463 557 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 PDE6AP16499 860 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 KRT15P19012 456 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 SCNN1BP51168 640 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 EVA1CP58658 441 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 SPIRE1Q08AE8 756 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 MROH9Q5TGP6 573 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 OVCH1Q7RTY7 1134 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 NLRX1Q86UT6 975 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 CABP7Q86V35 215 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 OSTM1Q86WC4 334 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 ABI1Q8IZP0 508 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 LILRA2Q8N149 483 aa8.24□□□□□ -1.09
HERC4-213ENST00000506515 CDKN1CP49918 316 aaPredicted RBP8.23□□□□□ -1.09
HERC4-213ENST00000506515 RBM10P98175 930 aaKnown RBP8.23□□□□□ -1.09
HERC4-213ENST00000506515 SART3Q15020 963 aaKnown RBP8.23□□□□□ -1.09
HERC4-213ENST00000506515 WWC2Q6AWC2 1192 aa8.23□□□□□ -1.09
HERC4-213ENST00000506515 OTOP3Q7RTS5 596 aa8.23□□□□□ -1.09
HERC4-213ENST00000506515 ANKLE2Q86XL3 938 aa8.23□□□□□ -1.09
HERC4-213ENST00000506515 RPUSD2Q8IZ73 545 aaKnown RBP8.23□□□□□ -1.09
HERC4-213ENST00000506515 C2orf69Q8N8R5 385 aa8.23□□□□□ -1.09
HERC4-213ENST00000506515 PRPF38AQ8NAV1 312 aaKnown RBP8.23□□□□□ -1.09
HERC4-213ENST00000506515 OR2W6PQ8NHA6 318 aa8.23□□□□□ -1.09
HERC4-213ENST00000506515 ABHD4Q8TB40 342 aa8.23□□□□□ -1.09
HERC4-213ENST00000506515 PIP4K2CQ8TBX8 421 aa8.23□□□□□ -1.09
HERC4-213ENST00000506515 PANK1Q8TE04 598 aa8.23□□□□□ -1.09
HERC4-213ENST00000506515 USP7Q93009 1102 aa8.23□□□□□ -1.09
HERC4-213ENST00000506515 MCM8Q9UJA3 840 aa8.23□□□□□ -1.09
HERC4-213ENST00000506515 NKRFO15226 690 aaKnown RBP eCLIP8.22□□□□□ -1.09
HERC4-213ENST00000506515 CPEP16870 476 aa8.22□□□□□ -1.09
HERC4-213ENST00000506515 CDK11BP21127 795 aaKnown RBP8.22□□□□□ -1.09
HERC4-213ENST00000506515 ARL4AP40617 200 aa8.22□□□□□ -1.09
HERC4-213ENST00000506515 GP2P55259 537 aaKnown RBP8.22□□□□□ -1.09
HERC4-213ENST00000506515 JAM2P57087 298 aa8.22□□□□□ -1.09
HERC4-213ENST00000506515 DHCR24Q15392 516 aa8.22□□□□□ -1.09
HERC4-213ENST00000506515 RIOX2Q8IUF8 465 aa8.22□□□□□ -1.09
HERC4-213ENST00000506515 CHST14Q8NCH0 376 aa8.22□□□□□ -1.09
HERC4-213ENST00000506515 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.22□□□□□ -1.09
HERC4-213ENST00000506515 SHISA4Q96DD7 197 aa8.22□□□□□ -1.09
HERC4-213ENST00000506515 RXFP1Q9HBX9 757 aa8.22□□□□□ -1.09
HERC4-213ENST00000506515 ZKSCAN5Q9Y2L8 839 aa8.22□□□□□ -1.09
HERC4-213ENST00000506515 UNC13AQ9UPW8 1703 aa8.22□□□□□ -1.09
HERC4-213ENST00000506515 PTPDC1A2A3K4 754 aa8.21□□□□□ -1.1
HERC4-213ENST00000506515 KCNK3O14649 394 aa8.21□□□□□ -1.1
HERC4-213ENST00000506515 GAS7O60861 476 aa8.21□□□□□ -1.1
HERC4-213ENST00000506515 F2P00734 622 aa8.21□□□□□ -1.1
HERC4-213ENST00000506515 PNLIPP16233 465 aa8.21□□□□□ -1.1
HERC4-213ENST00000506515 SNX17Q15036 470 aa8.21□□□□□ -1.1
HERC4-213ENST00000506515 GPR19Q15760 415 aa8.21□□□□□ -1.1
HERC4-213ENST00000506515 ARHGAP36Q6ZRI8 547 aa8.21□□□□□ -1.1
HERC4-213ENST00000506515 ORAI3Q9BRQ5 295 aa8.21□□□□□ -1.1
HERC4-213ENST00000506515 RNF32Q9H0A6 362 aa8.21□□□□□ -1.1
HERC4-213ENST00000506515 SLC6A20Q9NP91 592 aa8.21□□□□□ -1.1
HERC4-213ENST00000506515 SIT1Q9Y3P8 196 aa8.21□□□□□ -1.1
HERC4-213ENST00000506515 BICRAQ9NZM4 1560 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 TCRBV5S4A2TA0A5A2 114 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 KRIT1O00522 736 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 KRT37O76014 449 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 GLI4P10075 376 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 SDHBP21912 280 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 AFMP43652 599 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 MECP2P51608 486 aaKnown RBP8.2□□□□□ -1.1
HERC4-213ENST00000506515 IL2P60568 153 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 LACTBP83111 547 aaPredicted RBP8.2□□□□□ -1.1
HERC4-213ENST00000506515 FAM50AQ14320 339 aaKnown RBP8.2□□□□□ -1.1
HERC4-213ENST00000506515 STEAP3Q658P3 488 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 EP400NLQ6ZTU2 488 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 PTRH1Q86Y79 214 aaKnown RBP8.2□□□□□ -1.1
HERC4-213ENST00000506515 KIF18BQ86Y91 864 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 TTC1Q99614 292 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 SMURF1Q9HCE7 757 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 CRTAC1Q9NQ79 661 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 B4GALT6Q9UBX8 382 aa8.2□□□□□ -1.1
HERC4-213ENST00000506515 ZNF561-AS1K7EIQ3 104 aa8.19□□□□□ -1.1
HERC4-213ENST00000506515 EYA4O95677 639 aa8.19□□□□□ -1.1
HERC4-213ENST00000506515 AMY2AP04746 511 aa8.19□□□□□ -1.1
HERC4-213ENST00000506515 AMY2BP19961 511 aa8.19□□□□□ -1.1
HERC4-213ENST00000506515 ID4P47928 161 aa8.19□□□□□ -1.1
HERC4-213ENST00000506515 DSG1Q02413 1049 aa8.19□□□□□ -1.1
HERC4-213ENST00000506515 ARTNQ5T4W7 220 aa8.19□□□□□ -1.1
HERC4-213ENST00000506515 FYB2Q5VWT5 728 aa8.19□□□□□ -1.1
HERC4-213ENST00000506515 LHFPL2Q6ZUX7 228 aa8.19□□□□□ -1.1
HERC4-213ENST00000506515 WDR66Q8TBY9 1149 aa8.19□□□□□ -1.1
HERC4-213ENST00000506515 KIRREL1Q96J84 757 aa8.19□□□□□ -1.1
HERC4-213ENST00000506515 GPR101Q96P66 508 aaPredicted RBP8.19□□□□□ -1.1
HERC4-213ENST00000506515 IFT22Q9H7X7 185 aa8.19□□□□□ -1.1
HERC4-213ENST00000506515 THG1LQ9NWX6 298 aaKnown RBP8.19□□□□□ -1.1
HERC4-213ENST00000506515 DSEQ9UL01 958 aa8.19□□□□□ -1.1
HERC4-213ENST00000506515 ZC3H12DA2A288 527 aaKnown RBP8.18□□□□□ -1.1
HERC4-213ENST00000506515 NEMP1O14524 444 aa8.18□□□□□ -1.1
HERC4-213ENST00000506515 SLC27A2O14975 620 aa8.18□□□□□ -1.1
HERC4-213ENST00000506515 DBHP09172 617 aa8.18□□□□□ -1.1
HERC4-213ENST00000506515 STAT4Q14765 748 aa8.18□□□□□ -1.1
HERC4-213ENST00000506515 HABP4Q5JVS0 413 aaKnown RBP8.18□□□□□ -1.1
HERC4-213ENST00000506515 DCP2Q8IU60 420 aaKnown RBP8.18□□□□□ -1.1
HERC4-213ENST00000506515 RBM12BQ8IXT5 1001 aaKnown RBP8.18□□□□□ -1.1
HERC4-213ENST00000506515 SMC1BQ8NDV3 1235 aa8.18□□□□□ -1.1
HERC4-213ENST00000506515 FLAD1Q8NFF5 587 aa8.18□□□□□ -1.1
HERC4-213ENST00000506515 SH3RF2Q8TEC5 729 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms