RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 MTG1Q9BT17 334 aaPredicted RBP19.08■□□□□ 0.64
SNCA-209ENST00000506244 VPS54Q9P1Q0 977 aa19.08■□□□□ 0.64
SNCA-209ENST00000506244 GGPS1O95749 300 aa19.07■□□□□ 0.64
SNCA-209ENST00000506244 MMP3P08254 477 aa19.07■□□□□ 0.64
SNCA-209ENST00000506244 MYL3P08590 195 aa19.07■□□□□ 0.64
SNCA-209ENST00000506244 SREBF1P36956 1147 aa19.07■□□□□ 0.64
SNCA-209ENST00000506244 NLRP5P59047 1200 aa19.07■□□□□ 0.64
SNCA-209ENST00000506244 PURAQ00577 322 aaKnown RBP19.07■□□□□ 0.64
SNCA-209ENST00000506244 ME3Q16798 604 aa19.07■□□□□ 0.64
SNCA-209ENST00000506244 GALNT17Q6IS24 598 aa19.07■□□□□ 0.64
SNCA-209ENST00000506244 GIMAP8Q8ND71 665 aaPredicted RBP19.07■□□□□ 0.64
SNCA-209ENST00000506244 AFG1LQ8WV93 481 aa19.07■□□□□ 0.64
SNCA-209ENST00000506244 TOX2Q96NM4 488 aa19.07■□□□□ 0.64
SNCA-209ENST00000506244 RTEL1Q9NZ71 1219 aa19.07■□□□□ 0.64
SNCA-209ENST00000506244 LIMCH1Q9UPQ0 1083 aa19.07■□□□□ 0.64
SNCA-209ENST00000506244 DCDC2CA8MYV0 355 aa19.06■□□□□ 0.64
SNCA-209ENST00000506244 SPATA31C2B4DYI2 1134 aa19.06■□□□□ 0.64
SNCA-209ENST00000506244 ARVCFO00192 962 aa19.06■□□□□ 0.64
SNCA-209ENST00000506244 TLR3O15455 904 aaKnown RBP19.06■□□□□ 0.64
SNCA-209ENST00000506244 MAFGO15525 162 aa19.06■□□□□ 0.64
SNCA-209ENST00000506244 ST18O60284 1047 aa19.06■□□□□ 0.64
SNCA-209ENST00000506244 PQBP1O60828 265 aaKnown RBP19.06■□□□□ 0.64
SNCA-209ENST00000506244 MTMR1Q13613 665 aa19.06■□□□□ 0.64
SNCA-209ENST00000506244 DGKDQ16760 1214 aa19.06■□□□□ 0.64
SNCA-209ENST00000506244 CELF3Q5SZQ8 465 aaKnown RBP19.06■□□□□ 0.64
SNCA-209ENST00000506244 ANKRD33Q7Z3H0 272 aa19.06■□□□□ 0.64
SNCA-209ENST00000506244 SENP7Q9BQF6 1050 aa19.06■□□□□ 0.64
SNCA-209ENST00000506244 MLXIPQ9HAP2 919 aa19.06■□□□□ 0.64
SNCA-209ENST00000506244 CEP290O15078 2479 aa19.06■□□□□ 0.64
SNCA-209ENST00000506244 CLTBP09497 229 aa19.05■□□□□ 0.64
SNCA-209ENST00000506244 TLE2Q04725 743 aa19.05■□□□□ 0.64
SNCA-209ENST00000506244 MYSM1Q5VVJ2 828 aa19.05■□□□□ 0.64
SNCA-209ENST00000506244 JAKMIP3Q5VZ66 844 aa19.05■□□□□ 0.64
SNCA-209ENST00000506244 METTL7BQ6UX53 244 aa19.05■□□□□ 0.64
SNCA-209ENST00000506244 ZFP91Q96JP5 570 aaPredicted RBP19.05■□□□□ 0.64
SNCA-209ENST00000506244 ZSCAN31Q96LW9 406 aaPredicted RBP19.05■□□□□ 0.64
SNCA-209ENST00000506244 SPATA33Q96N06 139 aa19.05■□□□□ 0.64
SNCA-209ENST00000506244 KIF2CQ99661 725 aa19.05■□□□□ 0.64
SNCA-209ENST00000506244 KATNAL1Q9BW62 490 aa19.05■□□□□ 0.64
SNCA-209ENST00000506244 SH2B1Q9NRF2 756 aaPredicted RBP19.05■□□□□ 0.64
SNCA-209ENST00000506244 ZMYND8Q9ULU4 1186 aaPredicted RBP19.05■□□□□ 0.64
SNCA-209ENST00000506244 UBIAD1Q9Y5Z9 338 aa19.05■□□□□ 0.64
SNCA-209ENST00000506244 NOP56O00567 594 aaKnown RBP19.04■□□□□ 0.64
SNCA-209ENST00000506244 LARGE1O95461 756 aa19.04■□□□□ 0.64
SNCA-209ENST00000506244 ARHGAP4P98171 946 aa19.04■□□□□ 0.64
SNCA-209ENST00000506244 ITGA7Q13683 1181 aa19.04■□□□□ 0.64
SNCA-209ENST00000506244 NECAB1Q8N987 351 aa19.04■□□□□ 0.64
SNCA-209ENST00000506244 DAGLBQ8NCG7 672 aa19.04■□□□□ 0.64
SNCA-209ENST00000506244 PGBD1Q96JS3 809 aa19.04■□□□□ 0.64
SNCA-209ENST00000506244 TBC1D32Q96NH3 1257 aa19.04■□□□□ 0.64
SNCA-209ENST00000506244 JADE2Q9NQC1 790 aa19.04■□□□□ 0.64
SNCA-209ENST00000506244 PRDM5Q9NQX1 630 aaPredicted RBP19.04■□□□□ 0.64
SNCA-209ENST00000506244 PDLIM7Q9NR12 457 aa19.04■□□□□ 0.64
SNCA-209ENST00000506244 TMEM260Q9NX78 707 aa19.04■□□□□ 0.64
SNCA-209ENST00000506244 ORC3Q9UBD5 711 aaPredicted RBP19.04■□□□□ 0.64
SNCA-209ENST00000506244 PCDHA4Q9UN74 947 aa19.04■□□□□ 0.64
SNCA-209ENST00000506244 SCN10AQ9Y5Y9 1956 aa19.03■□□□□ 0.64
SNCA-209ENST00000506244 HOXD8P13378 290 aaPredicted RBP19.03■□□□□ 0.64
SNCA-209ENST00000506244 ITGB5P18084 799 aa19.03■□□□□ 0.64
SNCA-209ENST00000506244 ZNF76P36508 570 aa19.03■□□□□ 0.64
SNCA-209ENST00000506244 CEP55Q53EZ4 464 aa19.03■□□□□ 0.64
SNCA-209ENST00000506244 SLC43A3Q8NBI5 491 aa19.03■□□□□ 0.64
SNCA-209ENST00000506244 MXRA8Q9BRK3 442 aa19.03■□□□□ 0.64
SNCA-209ENST00000506244 CTDNEP1O95476 244 aa19.02■□□□□ 0.64
SNCA-209ENST00000506244 SYN1P17600 705 aa19.02■□□□□ 0.64
SNCA-209ENST00000506244 CDK7P50613 346 aa19.02■□□□□ 0.64
SNCA-209ENST00000506244 SETQ01105 290 aaPredicted RBP19.02■□□□□ 0.64
SNCA-209ENST00000506244 SP2Q02086 613 aa19.02■□□□□ 0.64
SNCA-209ENST00000506244 SEMA3FQ13275 785 aa19.02■□□□□ 0.64
SNCA-209ENST00000506244 NFRKBQ6P4R8 1299 aa19.02■□□□□ 0.64
SNCA-209ENST00000506244 NIPA1Q7RTP0 329 aa19.02■□□□□ 0.64
SNCA-209ENST00000506244 NSUN7Q8NE18 718 aaKnown RBP19.02■□□□□ 0.64
SNCA-209ENST00000506244 LBHD1Q9BQE6 289 aaPredicted RBP19.02■□□□□ 0.64
SNCA-209ENST00000506244 BRMS1Q9HCU9 246 aa19.02■□□□□ 0.64
SNCA-209ENST00000506244 PPFIA4O75335 1185 aa19.01■□□□□ 0.63
SNCA-209ENST00000506244 CYP3A4P08684 503 aa19.01■□□□□ 0.63
SNCA-209ENST00000506244 PSMC6P62333 389 aa19.01■□□□□ 0.63
SNCA-209ENST00000506244 PTPN11Q06124 597 aaPredicted RBP19.01■□□□□ 0.63
SNCA-209ENST00000506244 HSDL1Q3SXM5 330 aa19.01■□□□□ 0.63
SNCA-209ENST00000506244 CYFIP1Q7L576 1253 aa19.01■□□□□ 0.63
SNCA-209ENST00000506244 FAM126BQ8IXS8 530 aa19.01■□□□□ 0.63
SNCA-209ENST00000506244 BLIDQ8IZY5 108 aa19.01■□□□□ 0.63
SNCA-209ENST00000506244 LLPHQ9BRT6 129 aaKnown RBP19.01■□□□□ 0.63
SNCA-209ENST00000506244 ALG1Q9BT22 464 aa19.01■□□□□ 0.63
SNCA-209ENST00000506244 TMEM39AQ9NV64 488 aa19.01■□□□□ 0.63
SNCA-209ENST00000506244 MYH7BA7E2Y1 1941 aa19.01■□□□□ 0.63
SNCA-209ENST00000506244 F2P00734 622 aa19■□□□□ 0.63
SNCA-209ENST00000506244 KCNA2P16389 499 aa19■□□□□ 0.63
SNCA-209ENST00000506244 TRIM29Q14134 588 aa19■□□□□ 0.63
SNCA-209ENST00000506244 RASGRP4Q8TDF6 673 aa19■□□□□ 0.63
SNCA-209ENST00000506244 CRYGNQ8WXF5 182 aa19■□□□□ 0.63
SNCA-209ENST00000506244 AIFM3Q96NN9 605 aa19■□□□□ 0.63
SNCA-209ENST00000506244 SDF4Q9BRK5 362 aa19■□□□□ 0.63
SNCA-209ENST00000506244 PHF20Q9BVI0 1012 aa19■□□□□ 0.63
SNCA-209ENST00000506244 BACH2Q9BYV9 841 aa19■□□□□ 0.63
SNCA-209ENST00000506244 KCNH7Q9NS40 1196 aa19■□□□□ 0.63
SNCA-209ENST00000506244 LTBP2Q14767 1821 aa19■□□□□ 0.63
SNCA-209ENST00000506244 MEIS1O00470 390 aa18.99■□□□□ 0.63
SNCA-209ENST00000506244 KIAA0355O15063 1070 aa18.99■□□□□ 0.63
SNCA-209ENST00000506244 SORBS3O60504 671 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms