RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 PVALEFA0A1B0GWK0 134 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 GUCY2CP25092 1073 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 PPARDQ03181 441 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 CFAP221Q4G0U5 840 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 CACNA2D4Q7Z3S7 1137 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 DNAAF5Q86Y56 855 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 KRT12Q99456 494 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 SSU72P8A0A1W2PR75 194 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 ZEB2O60315 1214 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 ZCWPW2Q504Y3 356 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
UBE3D-206ENST00000505226 FAM83BQ5T0W9 1011 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 CLEC4GQ6UXB4 293 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 TANGO6Q9C0B7 1094 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 C6orf50Q9HD87 102 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 ZNF652Q9Y2D9 606 aa13.13□□□□□ -0.31
UBE3D-206ENST00000505226 SHTN1A0MZ66 631 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 MMS22LQ6ZRQ5 1243 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 RNF10Q8N5U6 811 aaKnown RBP13.12□□□□□ -0.31
UBE3D-206ENST00000505226 PROCA1Q8NCQ7 364 aaPredicted RBP13.12□□□□□ -0.31
UBE3D-206ENST00000505226 RAD54LQ92698 747 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 INPP4AQ96PE3 977 aaPredicted RBP13.12□□□□□ -0.31
UBE3D-206ENST00000505226 SNED1Q8TER0 1413 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 A0A087X0T9 212 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 NDUFAB1O14561 156 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 FAM228BP0C875 321 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 HNRNPH1P31943 449 aaKnown RBP13.12□□□□□ -0.31
UBE3D-206ENST00000505226 LRRC63Q05C16 580 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 NAB2Q15742 525 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 CALCRLQ16602 461 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 GLE1Q53GS7 698 aaKnown RBP13.12□□□□□ -0.31
UBE3D-206ENST00000505226 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 SUGP1Q8IWZ8 645 aaKnown RBP13.12□□□□□ -0.31
UBE3D-206ENST00000505226 IFT20Q8IY31 132 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 ABCB11O95342 1321 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 USP17L5A8MUK1 530 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 LSP1P33241 339 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 SEC24CP53992 1094 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
UBE3D-206ENST00000505226 ARID5AQ03989 594 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 ENOX2Q16206 610 aaKnown RBP13.12□□□□□ -0.31
UBE3D-206ENST00000505226 MEI1Q5TIA1 1274 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 REXO1Q8N1G1 1221 aaKnown RBP13.12□□□□□ -0.31
UBE3D-206ENST00000505226 TBC1D5Q92609 795 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 COA7Q96BR5 231 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 DNAJC19Q96DA6 116 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 UIMC1Q96RL1 719 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 RUFY1Q96T51 708 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 GOLPH3Q9H4A6 298 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 TBC1D7Q9P0N9 293 aa13.12□□□□□ -0.31
UBE3D-206ENST00000505226 MAST2Q6P0Q8 1798 aa13.11□□□□□ -0.31
UBE3D-206ENST00000505226 GNA11P29992 359 aa13.11□□□□□ -0.31
UBE3D-206ENST00000505226 FXR2P51116 673 aaKnown RBP eCLIP13.11□□□□□ -0.31
UBE3D-206ENST00000505226 GPR101Q96P66 508 aaPredicted RBP13.11□□□□□ -0.31
UBE3D-206ENST00000505226 ROBO1Q9Y6N7 1651 aa13.11□□□□□ -0.31
UBE3D-206ENST00000505226 RAD51CO43502 376 aa13.11□□□□□ -0.31
UBE3D-206ENST00000505226 TM4SF1P30408 202 aa13.11□□□□□ -0.31
UBE3D-206ENST00000505226 FNTAP49354 379 aa13.11□□□□□ -0.31
UBE3D-206ENST00000505226 CFAP58Q5T655 872 aa13.11□□□□□ -0.31
UBE3D-206ENST00000505226 KDM7AQ6ZMT4 941 aa13.11□□□□□ -0.31
UBE3D-206ENST00000505226 CEP95Q96GE4 821 aa13.11□□□□□ -0.31
UBE3D-206ENST00000505226 STK17AQ9UEE5 414 aa13.11□□□□□ -0.31
UBE3D-206ENST00000505226 GRID2IPA4D2P6 1211 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 LDHBP07195 334 aaKnown RBP13.1□□□□□ -0.31
UBE3D-206ENST00000505226 ECHS1P30084 290 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 INPP5BP32019 993 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 CDK8P49336 464 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 EYA3Q99504 573 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 LZTS2Q9BRK4 669 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 LSM14BQ9BX40 385 aaKnown RBP13.1□□□□□ -0.31
UBE3D-206ENST00000505226 FAM107BQ9H098 131 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 CEP72Q9P209 647 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 ADAMTS1Q9UHI8 967 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 PCDHGC5Q9Y5F6 944 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 FRMPD2Q68DX3 1309 aaPredicted RBP13.1□□□□□ -0.31
UBE3D-206ENST00000505226 MYO1FO00160 1098 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 SERPING1P05155 500 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 DDB1Q16531 1140 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 PTPROQ16827 1216 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 SLC9C1Q4G0N8 1177 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 SFMBT2Q5VUG0 894 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 SNX29Q8TEQ0 813 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 SRP68Q9UHB9 627 aaKnown RBP13.1□□□□□ -0.31
UBE3D-206ENST00000505226 ATP6V0A2Q9Y487 856 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 COL4A3BPQ9Y5P4 624 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 TRAF5O00463 557 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 COASYQ13057 564 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 CDC37Q16543 378 aaPredicted RBP13.1□□□□□ -0.31
UBE3D-206ENST00000505226 TMEM119Q4V9L6 283 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 EMC10Q5UCC4 262 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 NAA35Q5VZE5 725 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 MREGQ8N565 214 aa13.1□□□□□ -0.31
UBE3D-206ENST00000505226 DDX60LQ5H9U9 1706 aaKnown RBP13.1□□□□□ -0.31
UBE3D-206ENST00000505226 NPHP3-ACAD11A0A0J9YXS1 232 aa13.09□□□□□ -0.31
UBE3D-206ENST00000505226 MYBP10242 640 aa13.09□□□□□ -0.31
UBE3D-206ENST00000505226 CACNB1Q02641 598 aaPredicted RBP13.09□□□□□ -0.31
UBE3D-206ENST00000505226 PAK2Q13177 524 aa13.09□□□□□ -0.31
UBE3D-206ENST00000505226 SLC18A3Q16572 532 aa13.09□□□□□ -0.31
UBE3D-206ENST00000505226 KIAA0753Q2KHM9 967 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms