RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 RXFP1Q9HBX9 757 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 BTG4Q9NY30 223 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 CLDND1Q9NY35 253 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 PALD1Q9ULE6 856 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 SIT1Q9Y3P8 196 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 KDM2BQ8NHM5 1336 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 SH3D21A4FU49 640 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 AQP7O14520 342 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 MAFKO60675 156 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 NAT1P18440 290 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 NFE2L2Q16236 605 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 VWA3BQ502W6 1294 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 FOXB2Q5VYV0 432 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 STEAP3Q658P3 488 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 SAPCD2Q86UD0 394 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 TTLL11Q8NHH1 800 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 FNIP1Q8TF40 1166 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 THAP3Q8WTV1 239 aaPredicted RBP5.55□□□□□ -1.52
LINC01088-202ENST00000505149 EXOC2Q96KP1 924 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 PWWP2AQ96N64 755 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 SRPK1Q96SB4 655 aaKnown RBP5.55□□□□□ -1.52
LINC01088-202ENST00000505149 DHRS4Q9BTZ2 278 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 SMOC1Q9H4F8 434 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 SLC6A20Q9NP91 592 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 PFDN2Q9UHV9 154 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 FAN1Q9Y2M0 1017 aa5.55□□□□□ -1.52
LINC01088-202ENST00000505149 TCRBV5S2A0A599 114 aa5.54□□□□□ -1.52
LINC01088-202ENST00000505149 CCDC85CA6NKD9 419 aa5.54□□□□□ -1.52
LINC01088-202ENST00000505149 PLA2G1BP04054 148 aaKnown RBP5.54□□□□□ -1.52
LINC01088-202ENST00000505149 FAM153BP0C7A2 387 aa5.54□□□□□ -1.52
LINC01088-202ENST00000505149 GRK2P25098 689 aa5.54□□□□□ -1.52
LINC01088-202ENST00000505149 GRK3P35626 688 aa5.54□□□□□ -1.52
LINC01088-202ENST00000505149 GABREP78334 506 aa5.54□□□□□ -1.52
LINC01088-202ENST00000505149 DLX2Q07687 328 aaPredicted RBP5.54□□□□□ -1.52
LINC01088-202ENST00000505149 KCNT2Q6UVM3 1135 aa5.54□□□□□ -1.52
LINC01088-202ENST00000505149 MILR1Q7Z6M3 343 aa5.54□□□□□ -1.52
LINC01088-202ENST00000505149 IPO9Q96P70 1041 aaKnown RBP5.54□□□□□ -1.52
LINC01088-202ENST00000505149 DNAJC7Q99615 494 aa5.54□□□□□ -1.52
LINC01088-202ENST00000505149 CDC6Q99741 560 aa5.54□□□□□ -1.52
LINC01088-202ENST00000505149 ADAMTS20P59510 1910 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 KRIT1O00522 736 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 KCNQ2O43526 872 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 C8BP07358 591 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 CYP2C8P10632 490 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 MC3RP41968 323 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 LIMS1P48059 325 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 C2orf27AQ580R0 203 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 TRIM61Q5EBN2 209 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 FAM209AQ5JX71 171 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 OTOP3Q7RTS5 596 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 ZC3H18Q86VM9 953 aaKnown RBP5.53□□□□□ -1.52
LINC01088-202ENST00000505149 TRIM48Q8IWZ4 208 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 MARCH10Q8NA82 808 aaPredicted RBP5.53□□□□□ -1.52
LINC01088-202ENST00000505149 ZSWIM2Q8NEG5 633 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 SMARCC2Q8TAQ2 1214 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 UHMK1Q8TAS1 419 aaKnown RBP5.53□□□□□ -1.52
LINC01088-202ENST00000505149 CHAMP1Q96JM3 812 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 KCNC2Q96PR1 638 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 BCAS3Q9H6U6 928 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 LUC7LQ9NQ29 371 aaKnown RBP5.53□□□□□ -1.52
LINC01088-202ENST00000505149 MRPS23Q9Y3D9 190 aaKnown RBP5.53□□□□□ -1.52
LINC01088-202ENST00000505149 PCDHB4Q9Y5E5 795 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 PMF1-BGLAPU3KQ54 211 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 ASXL2Q76L83 1435 aa5.53□□□□□ -1.52
LINC01088-202ENST00000505149 FAM47E-STBD1D6RA91 191 aa5.52□□□□□ -1.53
LINC01088-202ENST00000505149 ARVCFO00192 962 aa5.52□□□□□ -1.53
LINC01088-202ENST00000505149 FFAR3O14843 346 aa5.52□□□□□ -1.53
LINC01088-202ENST00000505149 SOD2P04179 222 aa5.52□□□□□ -1.53
LINC01088-202ENST00000505149 TTLL10Q6ZVT0 673 aa5.52□□□□□ -1.53
LINC01088-202ENST00000505149 TP53I13Q8NBR0 393 aaPredicted RBP5.52□□□□□ -1.53
LINC01088-202ENST00000505149 PMFBP1Q8TBY8 1022 aa5.52□□□□□ -1.53
LINC01088-202ENST00000505149 DNAJC2Q99543 621 aaKnown RBP5.52□□□□□ -1.53
LINC01088-202ENST00000505149 ALG1Q9BT22 464 aa5.52□□□□□ -1.53
LINC01088-202ENST00000505149 DTLQ9NZJ0 730 aa5.52□□□□□ -1.53
LINC01088-202ENST00000505149 MYOTQ9UBF9 498 aa5.52□□□□□ -1.53
LINC01088-202ENST00000505149 ASH2LQ9UBL3 628 aa5.52□□□□□ -1.53
LINC01088-202ENST00000505149 CDK11AQ9UQ88 783 aaPredicted RBP5.52□□□□□ -1.53
LINC01088-202ENST00000505149 NUB1Q9Y5A7 615 aa5.52□□□□□ -1.53
LINC01088-202ENST00000505149 BLACEA4D250 179 aa5.51□□□□□ -1.53
LINC01088-202ENST00000505149 TRIM13O60858 407 aa5.51□□□□□ -1.53
LINC01088-202ENST00000505149 EFCAB14O75071 495 aa5.51□□□□□ -1.53
LINC01088-202ENST00000505149 EPHA5P54756 1037 aa5.51□□□□□ -1.53
LINC01088-202ENST00000505149 SPIRE1Q08AE8 756 aa5.51□□□□□ -1.53
LINC01088-202ENST00000505149 PAK1Q13153 545 aa5.51□□□□□ -1.53
LINC01088-202ENST00000505149 CR1LQ2VPA4 569 aa5.51□□□□□ -1.53
LINC01088-202ENST00000505149 SP8Q8IXZ3 490 aa5.51□□□□□ -1.53
LINC01088-202ENST00000505149 GSTCDQ8NEC7 633 aa5.51□□□□□ -1.53
LINC01088-202ENST00000505149 TOE1Q96GM8 510 aaKnown RBP5.51□□□□□ -1.53
LINC01088-202ENST00000505149 C11orf84Q9BUA3 381 aaPredicted RBP5.51□□□□□ -1.53
LINC01088-202ENST00000505149 PPARGC1AQ9UBK2 798 aaKnown RBP5.51□□□□□ -1.53
LINC01088-202ENST00000505149 NKX3-2P78367 333 aa5.5□□□□□ -1.53
LINC01088-202ENST00000505149 LIPIQ6XZB0 460 aa5.5□□□□□ -1.53
LINC01088-202ENST00000505149 TTLL6Q8N841 843 aa5.5□□□□□ -1.53
LINC01088-202ENST00000505149 KYQ8NBH2 561 aa5.5□□□□□ -1.53
LINC01088-202ENST00000505149 ARRDC4Q8NCT1 418 aa5.5□□□□□ -1.53
LINC01088-202ENST00000505149 PIP4K2CQ8TBX8 421 aa5.5□□□□□ -1.53
LINC01088-202ENST00000505149 GORASP1Q9BQQ3 440 aa5.5□□□□□ -1.53
LINC01088-202ENST00000505149 JAM3Q9BX67 310 aa5.5□□□□□ -1.53
LINC01088-202ENST00000505149 MRPL4Q9BYD3 311 aaKnown RBP5.5□□□□□ -1.53
LINC01088-202ENST00000505149 PARD6AQ9NPB6 346 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms