RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 RABEP2Q9H5N1 569 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 JMJD4Q9H9V9 463 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 E9PMD0 336 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 RGL2O15211 777 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 TLR2O60603 784 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 LCA5LO95447 670 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 EHHADHQ08426 723 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 ASTE1Q2TB18 679 aaPredicted RBP17.73■□□□□ 0.43
DDX41-205ENST00000505081 TMEM119Q4V9L6 283 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 PRR5LQ6MZQ0 368 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 CCDC84Q86UT8 332 aaPredicted RBP17.73■□□□□ 0.43
DDX41-205ENST00000505081 ADGRF4Q8IZF3 695 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 TLR10Q9BXR5 811 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 POLLQ9UGP5 575 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 LRRC63Q05C16 580 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 CCDC40Q4G0X9 1142 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 FAM196AQ6ZSG2 479 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 RBM12Q9NTZ6 932 aaKnown RBP17.72■□□□□ 0.43
DDX41-205ENST00000505081 FAM184BQ9ULE4 1060 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 GOLGA6BA6NDN3 693 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 MARCH6O60337 910 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 NOL4O94818 638 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 TRAPPC3LQ5T215 181 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 CCDC181Q5TID7 509 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 KLHDC7AQ5VTJ3 777 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 MYOCDQ8IZQ8 938 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 TSEN2Q8NCE0 465 aaKnown RBP17.72■□□□□ 0.43
DDX41-205ENST00000505081 EHD4Q9H223 541 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 DDX4Q9NQI0 724 aaKnown RBP17.72■□□□□ 0.43
DDX41-205ENST00000505081 DDX25Q9UHL0 483 aaKnown RBP17.72■□□□□ 0.43
DDX41-205ENST00000505081 GGA1Q9UJY5 639 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 DAGLAQ9Y4D2 1042 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 HYOU1Q9Y4L1 999 aa17.72■□□□□ 0.43
DDX41-205ENST00000505081 IVLP07476 585 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 SMARCA1P28370 1054 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 HAUS3Q68CZ6 603 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 IQCEQ6IPM2 695 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 KCTD1Q719H9 257 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 ALS2CR12Q96Q35 445 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 RPS6KA5O75582 802 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 IL1R1P14778 569 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 NOVP48745 357 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 POLR2FP61218 127 aaKnown RBP17.71■□□□□ 0.43
DDX41-205ENST00000505081 GTF2IP78347 998 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 PDIA5Q14554 519 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 TSG101Q99816 390 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 MXD3Q9BW11 206 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 LSM14BQ9BX40 385 aaKnown RBP17.71■□□□□ 0.43
DDX41-205ENST00000505081 PANK4Q9NVE7 773 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 PACSIN2Q9UNF0 486 aaPredicted RBP17.71■□□□□ 0.43
DDX41-205ENST00000505081 ZNF831Q5JPB2 1677 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 ZSCAN5CA6NGD5 496 aaPredicted RBP17.71■□□□□ 0.43
DDX41-205ENST00000505081 VGLL3A8MV65 326 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 USP17L10C9JJH3 530 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 RIMBP2O15034 1052 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 RAD21O60216 631 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 RNASE9P60153 205 aaKnown RBP17.71■□□□□ 0.43
DDX41-205ENST00000505081 KCTD19Q17RG1 926 aaPredicted RBP17.71■□□□□ 0.43
DDX41-205ENST00000505081 RAB34Q9BZG1 259 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 COL4A3BPQ9Y5P4 624 aa17.71■□□□□ 0.43
DDX41-205ENST00000505081 FGFR1OPO95684 399 aaKnown RBP17.7■□□□□ 0.42
DDX41-205ENST00000505081 FTCDO95954 541 aa17.7■□□□□ 0.42
DDX41-205ENST00000505081 ZCWPW2Q504Y3 356 aa17.7■□□□□ 0.42
DDX41-205ENST00000505081 FAM26FQ5R3K3 315 aa17.7■□□□□ 0.42
DDX41-205ENST00000505081 FAM83BQ5T0W9 1011 aa17.7■□□□□ 0.42
DDX41-205ENST00000505081 TTC19Q6DKK2 380 aaPredicted RBP17.7■□□□□ 0.42
DDX41-205ENST00000505081 DNAAF5Q86Y56 855 aa17.7■□□□□ 0.42
DDX41-205ENST00000505081 ESYT3A0FGR9 886 aa17.7■□□□□ 0.42
DDX41-205ENST00000505081 C6orf229H3BNL8 230 aa17.7■□□□□ 0.42
DDX41-205ENST00000505081 PLCG2P16885 1265 aa17.7■□□□□ 0.42
DDX41-205ENST00000505081 CCDC70Q6NSX1 233 aa17.7■□□□□ 0.42
DDX41-205ENST00000505081 KIAA1024Q9UPX6 916 aa17.7■□□□□ 0.42
DDX41-205ENST00000505081 EP400Q96L91 3159 aa17.7■□□□□ 0.42
DDX41-205ENST00000505081 BTAF1O14981 1849 aa17.7■□□□□ 0.42
DDX41-205ENST00000505081 USP17L15C9J2P7 530 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 USP17L13C9JLJ4 530 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 USP17L11C9JVI0 530 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 USP17L18D6R9N7 530 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 USP17L22D6RA61 530 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 USP17L17D6RBQ6 530 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 USP17L19D6RCP7 530 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 USP17L20D6RJB6 530 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 TCP1P17987 556 aaKnown RBP17.69■□□□□ 0.42
DDX41-205ENST00000505081 STAT3P40763 770 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 USP17L24Q0WX57 530 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 ORC2Q13416 577 aaPredicted RBP17.69■□□□□ 0.42
DDX41-205ENST00000505081 ASPRV1Q53RT3 343 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 DNAJC21Q5F1R6 531 aaKnown RBP17.69■□□□□ 0.42
DDX41-205ENST00000505081 USP17L6PQ6QN14 398 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 C15orf52Q6ZUT6 534 aaKnown RBP17.69■□□□□ 0.42
DDX41-205ENST00000505081 NGLY1Q96IV0 654 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 PACSIN1Q9BY11 444 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 ZHX3Q9H4I2 956 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 RIC8AQ9NPQ8 531 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 POTEB3A0JP26 581 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 GOLGA6CA6NDK9 693 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 POTECB2RU33 542 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 PJA2O43164 708 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 GOLGA6DP0CG33 693 aa17.69■□□□□ 0.42
DDX41-205ENST00000505081 FKBP3Q00688 224 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms