RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 CPVLQ9H3G5 476 aa18.69■□□□□ 0.58
PDLIM7-213ENST00000505074 WDFY4Q6ZS81 3184 aa18.69■□□□□ 0.58
PDLIM7-213ENST00000505074 ST18O60284 1047 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 AMHP03971 560 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 MMP3P08254 477 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 SNHG28P0DPA3 235 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 CASTP20810 708 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 IRS1P35568 1242 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 RPS6P62753 249 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 EPC2Q52LR7 807 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 TCEAL5Q5H9L2 206 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 AFG1LQ8WV93 481 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 CLEC4DQ8WXI8 215 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 ANKS1AQ92625 1134 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 ZSCAN10Q96SZ4 725 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 DSCC1Q9BVC3 393 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 GTF2IRD1Q9UHL9 959 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 MYH6P13533 1939 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 KIAA1217Q5T5P2 1943 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 WDR19Q8NEZ3 1342 aa18.68■□□□□ 0.58
PDLIM7-213ENST00000505074 RALGAPA2Q2PPJ7 1873 aa18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 ARIH2O95376 493 aa18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 HTRA4P83105 476 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 PTK7Q13308 1070 aa18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 GPM6BQ13491 265 aa18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 MYOCDQ8IZQ8 938 aa18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 C7orf31Q8N865 590 aa18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 SP7Q8TDD2 431 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 PHOX2BQ99453 314 aa18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 POP1Q99575 1024 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 UBAC1Q9BSL1 405 aa18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 NSUN3Q9H649 340 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 CLDND1Q9NY35 253 aa18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 SUPT16HQ9Y5B9 1047 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-213ENST00000505074 H3BNC9 293 aa18.66■□□□□ 0.58
PDLIM7-213ENST00000505074 LGR5O75473 907 aa18.66■□□□□ 0.58
PDLIM7-213ENST00000505074 GH1P01241 217 aa18.66■□□□□ 0.58
PDLIM7-213ENST00000505074 NT5C2P49902 561 aa18.66■□□□□ 0.58
PDLIM7-213ENST00000505074 PTPN5P54829 565 aa18.66■□□□□ 0.58
PDLIM7-213ENST00000505074 CDC37Q16543 378 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-213ENST00000505074 KAT2BQ92831 832 aa18.66■□□□□ 0.58
PDLIM7-213ENST00000505074 KRT23Q9C075 422 aa18.66■□□□□ 0.58
PDLIM7-213ENST00000505074 CNNM2Q9H8M5 875 aa18.66■□□□□ 0.58
PDLIM7-213ENST00000505074 HDAC6Q9UBN7 1215 aa18.66■□□□□ 0.58
PDLIM7-213ENST00000505074 MYH7BA7E2Y1 1941 aa18.66■□□□□ 0.58
PDLIM7-213ENST00000505074 NCK2O43639 380 aa18.65■□□□□ 0.58
PDLIM7-213ENST00000505074 PARP1P09874 1014 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-213ENST00000505074 COL19A1Q14993 1142 aa18.65■□□□□ 0.58
PDLIM7-213ENST00000505074 ASPRV1Q53RT3 343 aa18.65■□□□□ 0.58
PDLIM7-213ENST00000505074 HERC4Q5GLZ8 1057 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-213ENST00000505074 ZNF618Q5T7W0 954 aa18.65■□□□□ 0.58
PDLIM7-213ENST00000505074 CCDC62Q6P9F0 684 aa18.65■□□□□ 0.58
PDLIM7-213ENST00000505074 ENAHQ8N8S7 591 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-213ENST00000505074 PRRX2Q99811 253 aa18.65■□□□□ 0.58
PDLIM7-213ENST00000505074 KATNAL1Q9BW62 490 aa18.65■□□□□ 0.58
PDLIM7-213ENST00000505074 VAT1LQ9HCJ6 419 aa18.65■□□□□ 0.58
PDLIM7-213ENST00000505074 MUTYHQ9UIF7 546 aa18.65■□□□□ 0.58
PDLIM7-213ENST00000505074 EMSYQ7Z589 1322 aa18.65■□□□□ 0.58
PDLIM7-213ENST00000505074 IRX6P78412 446 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-213ENST00000505074 DGKDQ16760 1214 aa18.64■□□□□ 0.57
PDLIM7-213ENST00000505074 IFIT1BQ5T764 474 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-213ENST00000505074 TRAF7Q6Q0C0 670 aa18.64■□□□□ 0.57
PDLIM7-213ENST00000505074 CHST3Q7LGC8 479 aa18.64■□□□□ 0.57
PDLIM7-213ENST00000505074 ADGRF4Q8IZF3 695 aa18.64■□□□□ 0.57
PDLIM7-213ENST00000505074 PRSS33Q8NF86 280 aa18.64■□□□□ 0.57
PDLIM7-213ENST00000505074 YME1L1Q96TA2 773 aa18.64■□□□□ 0.57
PDLIM7-213ENST00000505074 ALG1Q9BT22 464 aa18.64■□□□□ 0.57
PDLIM7-213ENST00000505074 ZSWIM5Q9P217 1185 aa18.64■□□□□ 0.57
PDLIM7-213ENST00000505074 ABCB11O95342 1321 aa18.64■□□□□ 0.57
PDLIM7-213ENST00000505074 ATG2AQ2TAZ0 1938 aa18.64■□□□□ 0.57
PDLIM7-213ENST00000505074 PSEN2P49810 448 aa18.63■□□□□ 0.57
PDLIM7-213ENST00000505074 ARHGAP1Q07960 439 aa18.63■□□□□ 0.57
PDLIM7-213ENST00000505074 MBTPS1Q14703 1052 aa18.63■□□□□ 0.57
PDLIM7-213ENST00000505074 SMAD2Q15796 467 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-213ENST00000505074 LY6KQ17RY6 165 aa18.63■□□□□ 0.57
PDLIM7-213ENST00000505074 TRIM71Q2Q1W2 868 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-213ENST00000505074 TTC22Q5TAA0 569 aa18.63■□□□□ 0.57
PDLIM7-213ENST00000505074 BMP8AQ7Z5Y6 402 aa18.63■□□□□ 0.57
PDLIM7-213ENST00000505074 RPAINQ86UA6 219 aa18.63■□□□□ 0.57
PDLIM7-213ENST00000505074 TMEM192Q8IY95 271 aa18.63■□□□□ 0.57
PDLIM7-213ENST00000505074 DBF4BQ8NFT6 615 aa18.63■□□□□ 0.57
PDLIM7-213ENST00000505074 TECTAO75443 2155 aa18.62■□□□□ 0.57
PDLIM7-213ENST00000505074 TRDNQ13061 729 aa18.62■□□□□ 0.57
PDLIM7-213ENST00000505074 PKN1Q16512 942 aa18.62■□□□□ 0.57
PDLIM7-213ENST00000505074 QRICH1Q2TAL8 776 aa18.62■□□□□ 0.57
PDLIM7-213ENST00000505074 SEPT14Q6ZU15 432 aa18.62■□□□□ 0.57
PDLIM7-213ENST00000505074 FBXO11Q86XK2 927 aa18.62■□□□□ 0.57
PDLIM7-213ENST00000505074 RNF135Q8IUD6 432 aa18.62■□□□□ 0.57
PDLIM7-213ENST00000505074 EDAQ92838 391 aa18.62■□□□□ 0.57
PDLIM7-213ENST00000505074 COL4A6Q14031 1691 aa18.61■□□□□ 0.57
PDLIM7-213ENST00000505074 GSPT1P15170 499 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-213ENST00000505074 PDE4AP27815 886 aa18.61■□□□□ 0.57
PDLIM7-213ENST00000505074 LTBRP36941 435 aa18.61■□□□□ 0.57
PDLIM7-213ENST00000505074 MKRN4PQ13434 485 aaPredicted RBP18.61■□□□□ 0.57
PDLIM7-213ENST00000505074 MFSD10Q14728 455 aa18.61■□□□□ 0.57
PDLIM7-213ENST00000505074 KIAA0753Q2KHM9 967 aa18.61■□□□□ 0.57
PDLIM7-213ENST00000505074 MCF2L2Q86YR7 1114 aa18.61■□□□□ 0.57
PDLIM7-213ENST00000505074 RUFY2Q8WXA3 655 aa18.61■□□□□ 0.57
PDLIM7-213ENST00000505074 WNT8BQ93098 351 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms