RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 JAKMIP3Q5VZ66 844 aa23.1■■□□□ 1.29
HERC6-205ENST00000504905 KCNV1Q6PIU1 500 aa23.1■■□□□ 1.29
HERC6-205ENST00000504905 NSUN7Q8NE18 718 aaKnown RBP23.1■■□□□ 1.29
HERC6-205ENST00000504905 COPS5Q92905 334 aa23.1■■□□□ 1.29
HERC6-205ENST00000504905 FERMT2Q96AC1 680 aa23.1■■□□□ 1.29
HERC6-205ENST00000504905 PGBD1Q96JS3 809 aa23.1■■□□□ 1.29
HERC6-205ENST00000504905 AIFM3Q96NN9 605 aa23.1■■□□□ 1.29
HERC6-205ENST00000504905 ANO3Q9BYT9 981 aa23.1■■□□□ 1.29
HERC6-205ENST00000504905 RTEL1Q9NZ71 1219 aa23.1■■□□□ 1.29
HERC6-205ENST00000504905 LAMA2P24043 3122 aaKnown RBP23.1■■□□□ 1.29
HERC6-205ENST00000504905 MOXD2PA6NHM9 499 aa23.09■■□□□ 1.29
HERC6-205ENST00000504905 CTAGE5O15320 804 aa23.09■■□□□ 1.29
HERC6-205ENST00000504905 ZEB2O60315 1214 aa23.09■■□□□ 1.29
HERC6-205ENST00000504905 DTNBO60941 627 aa23.09■■□□□ 1.29
HERC6-205ENST00000504905 ACLYP53396 1101 aa23.09■■□□□ 1.29
HERC6-205ENST00000504905 MCTP2Q6DN12 878 aa23.09■■□□□ 1.29
HERC6-205ENST00000504905 CCSAPQ6IQ19 270 aaPredicted RBP23.09■■□□□ 1.29
HERC6-205ENST00000504905 FAM177A1Q8N128 213 aaPredicted RBP23.09■■□□□ 1.29
HERC6-205ENST00000504905 WASF1Q92558 559 aa23.09■■□□□ 1.29
HERC6-205ENST00000504905 INPP4AQ96PE3 977 aaPredicted RBP23.09■■□□□ 1.29
HERC6-205ENST00000504905 DDX41Q9UJV9 622 aaKnown RBP23.09■■□□□ 1.29
HERC6-205ENST00000504905 A0A1W2PQ45 241 aaPredicted RBP23.08■■□□□ 1.29
HERC6-205ENST00000504905 A0A1W2PQY0 241 aa23.08■■□□□ 1.29
HERC6-205ENST00000504905 GH1P01241 217 aa23.08■■□□□ 1.29
HERC6-205ENST00000504905 TGFB3P10600 412 aa23.08■■□□□ 1.29
HERC6-205ENST00000504905 XBP1P17861 261 aa23.08■■□□□ 1.29
HERC6-205ENST00000504905 ST3GAL1Q11201 340 aa23.08■■□□□ 1.29
HERC6-205ENST00000504905 BRDTQ58F21 947 aaPredicted RBP23.08■■□□□ 1.29
HERC6-205ENST00000504905 NLRX1Q86UT6 975 aa23.08■■□□□ 1.29
HERC6-205ENST00000504905 CCDC83Q8IWF9 413 aa23.08■■□□□ 1.29
HERC6-205ENST00000504905 ASGR1P07306 291 aa23.07■■□□□ 1.28
HERC6-205ENST00000504905 CPT1AP50416 773 aa23.07■■□□□ 1.28
HERC6-205ENST00000504905 ATN1P54259 1190 aaPredicted RBP23.07■■□□□ 1.28
HERC6-205ENST00000504905 ADAMTS3O15072 1205 aa23.06■■□□□ 1.28
HERC6-205ENST00000504905 FIBPO43427 364 aa23.06■■□□□ 1.28
HERC6-205ENST00000504905 JAK2O60674 1132 aa23.06■■□□□ 1.28
HERC6-205ENST00000504905 ICAM3P32942 547 aa23.06■■□□□ 1.28
HERC6-205ENST00000504905 SREBF1P36956 1147 aa23.06■■□□□ 1.28
HERC6-205ENST00000504905 GALNT17Q6IS24 598 aa23.06■■□□□ 1.28
HERC6-205ENST00000504905 RASGRP4Q8TDF6 673 aa23.06■■□□□ 1.28
HERC6-205ENST00000504905 GLT1D1Q96MS3 346 aa23.06■■□□□ 1.28
HERC6-205ENST00000504905 LBHD1Q9BQE6 289 aaPredicted RBP23.06■■□□□ 1.28
HERC6-205ENST00000504905 ALG1Q9BT22 464 aa23.06■■□□□ 1.28
HERC6-205ENST00000504905 PCDHA4Q9UN74 947 aa23.06■■□□□ 1.28
HERC6-205ENST00000504905 SPATA31C2B4DYI2 1134 aa23.05■■□□□ 1.28
HERC6-205ENST00000504905 FDPSP14324 419 aaKnown RBP23.05■■□□□ 1.28
HERC6-205ENST00000504905 ARHGAP1Q07960 439 aa23.05■■□□□ 1.28
HERC6-205ENST00000504905 SLC39A5Q6ZMH5 540 aa23.05■■□□□ 1.28
HERC6-205ENST00000504905 DHX37Q8IY37 1157 aaKnown RBP23.05■■□□□ 1.28
HERC6-205ENST00000504905 BLIDQ8IZY5 108 aa23.05■■□□□ 1.28
HERC6-205ENST00000504905 VTI1AQ96AJ9 217 aa23.05■■□□□ 1.28
HERC6-205ENST00000504905 LLPHQ9BRT6 129 aaKnown RBP23.05■■□□□ 1.28
HERC6-205ENST00000504905 STARD7Q9NQZ5 370 aa23.05■■□□□ 1.28
HERC6-205ENST00000504905 KCNJ14Q9UNX9 436 aa23.05■■□□□ 1.28
HERC6-205ENST00000504905 UBIAD1Q9Y5Z9 338 aa23.05■■□□□ 1.28
HERC6-205ENST00000504905 GGPS1O95749 300 aa23.04■■□□□ 1.28
HERC6-205ENST00000504905 UBA1P22314 1058 aaKnown RBP23.04■■□□□ 1.28
HERC6-205ENST00000504905 MCM2P49736 904 aa23.04■■□□□ 1.28
HERC6-205ENST00000504905 ARHGAP4P98171 946 aa23.04■■□□□ 1.28
HERC6-205ENST00000504905 LAMC2Q13753 1193 aa23.04■■□□□ 1.28
HERC6-205ENST00000504905 DAGLBQ8NCG7 672 aa23.04■■□□□ 1.28
HERC6-205ENST00000504905 EMID1Q96A84 441 aaPredicted RBP23.04■■□□□ 1.28
HERC6-205ENST00000504905 GPRASP2Q96D09 838 aa23.04■■□□□ 1.28
HERC6-205ENST00000504905 CDHR1Q96JP9 859 aa23.04■■□□□ 1.28
HERC6-205ENST00000504905 GUCD1Q96NT3 240 aa23.04■■□□□ 1.28
HERC6-205ENST00000504905 POLR3EQ9NVU0 708 aa23.04■■□□□ 1.28
HERC6-205ENST00000504905 DOCK5Q9H7D0 1870 aa23.04■■□□□ 1.28
HERC6-205ENST00000504905 A6NJR5 290 aa23.03■■□□□ 1.28
HERC6-205ENST00000504905 CABYRO75952 493 aa23.03■■□□□ 1.28
HERC6-205ENST00000504905 CD2BP2O95400 341 aaKnown RBP23.03■■□□□ 1.28
HERC6-205ENST00000504905 MYL3P08590 195 aa23.03■■□□□ 1.28
HERC6-205ENST00000504905 ITGB5P18084 799 aa23.03■■□□□ 1.28
HERC6-205ENST00000504905 ZNF76P36508 570 aa23.03■■□□□ 1.28
HERC6-205ENST00000504905 SP2Q02086 613 aa23.03■■□□□ 1.28
HERC6-205ENST00000504905 SEMA3FQ13275 785 aa23.03■■□□□ 1.28
HERC6-205ENST00000504905 CELF3Q5SZQ8 465 aaKnown RBP23.03■■□□□ 1.28
HERC6-205ENST00000504905 CXCL17Q6UXB2 119 aa23.03■■□□□ 1.28
HERC6-205ENST00000504905 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.03■■□□□ 1.28
HERC6-205ENST00000504905 AFG1LQ8WV93 481 aa23.03■■□□□ 1.28
HERC6-205ENST00000504905 PHF20Q9BVI0 1012 aa23.03■■□□□ 1.28
HERC6-205ENST00000504905 COL25A1Q9BXS0 654 aaPredicted RBP23.03■■□□□ 1.28
HERC6-205ENST00000504905 ELP1O95163 1332 aa23.03■■□□□ 1.28
HERC6-205ENST00000504905 SORBS3O60504 671 aa23.02■■□□□ 1.28
HERC6-205ENST00000504905 RTP1P59025 263 aa23.02■■□□□ 1.28
HERC6-205ENST00000504905 MTMR1Q13613 665 aa23.02■■□□□ 1.28
HERC6-205ENST00000504905 NEDD9Q14511 834 aa23.02■■□□□ 1.28
HERC6-205ENST00000504905 MYSM1Q5VVJ2 828 aa23.02■■□□□ 1.28
HERC6-205ENST00000504905 MXRA8Q9BRK3 442 aa23.02■■□□□ 1.28
HERC6-205ENST00000504905 MLXIPQ9HAP2 919 aa23.02■■□□□ 1.28
HERC6-205ENST00000504905 JADE2Q9NQC1 790 aa23.02■■□□□ 1.28
HERC6-205ENST00000504905 GJB4Q9NTQ9 266 aa23.02■■□□□ 1.28
HERC6-205ENST00000504905 KPNA6O60684 536 aa23.01■■□□□ 1.27
HERC6-205ENST00000504905 MMP3P08254 477 aa23.01■■□□□ 1.27
HERC6-205ENST00000504905 CYP3A4P08684 503 aa23.01■■□□□ 1.27
HERC6-205ENST00000504905 HMGN5P82970 282 aaKnown RBP23.01■■□□□ 1.27
HERC6-205ENST00000504905 SNX17Q15036 470 aa23.01■■□□□ 1.27
HERC6-205ENST00000504905 NPY5RQ15761 445 aa23.01■■□□□ 1.27
HERC6-205ENST00000504905 CEP55Q53EZ4 464 aa23.01■■□□□ 1.27
HERC6-205ENST00000504905 PPTC7Q8NI37 304 aa23.01■■□□□ 1.27
HERC6-205ENST00000504905 SPATA33Q96N06 139 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms